BLASTX nr result
ID: Bupleurum21_contig00032207
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00032207
(955 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulga... 277 3e-72
gb|AAC95175.1| putative non-LTR retroelement reverse transcripta... 268 1e-69
gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana] 267 3e-69
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ... 266 4e-69
gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana] 265 2e-68
>emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1114
Score = 277 bits (708), Expect = 3e-72
Identities = 135/313 (43%), Positives = 199/313 (63%)
Frame = -3
Query: 953 YKCVAKVLAGRLKSVMNQIISDNQAAFIPKRIIGDNILLAQSLCHKYHSAAGSPRCTIKL 774
YK ++K+L RL++V+ +++ Q FIP+R IGDNILLA L Y+ SPRC IK+
Sbjct: 527 YKIISKILTKRLQAVITEVVDCAQTGFIPERHIGDNILLATELIRGYNRRHVSPRCVIKV 586
Query: 773 DISKAFDTLNWEFLLNSMLAMGFPPRFVKWIRVCLSSCMYSIKVNGSLEGYFASKSGVRQ 594
DI KA+D++ W FL + + +GFP F++WI C+ + YSI +NG F ++ G+RQ
Sbjct: 587 DIRKAYDSVEWVFLESMLKELGFPSMFIRWIMACVKTVSYSILLNGIPSIPFDAQKGLRQ 646
Query: 593 GDPISPYLFAIAMQVFSMSLHHSTSSDAGFKFHWNCQKQKLHHIIFADDVLMFSYGDLNS 414
GDP+SP+LFA++M+ S + + D F FH C++ KL H++FADD+LMF+ D +S
Sbjct: 647 GDPLSPFLFALSMEYLSRCMGNMCK-DPEFNFHPKCERIKLTHLMFADDLLMFARADASS 705
Query: 413 VSALMNGVNQFSRLSGMKLNLNKCSIFFGKVCPSVKSQILLSSGILEGNLPITYLGLPLL 234
+S +M N FS+ SG++ ++ K I+FG VC Q+ + G+LP YLG+PL
Sbjct: 706 ISKIMAAFNSFSKASGLQASIEKSCIYFGGVCHEEAEQLADRIQMPIGSLPFRYLGVPLA 765
Query: 233 SSRLNSQHCMPLIQKLCARASS*TGRFLSHAGRLKLLKSVLYSMQGYWSMYLFLPKGIIK 54
S +LN C PLI K+ RA LS+AGRL+L+K++LYSMQ YW LPK +IK
Sbjct: 766 SKKLNFSQCKPLIDKITTRAQGWVAHLLSYAGRLQLVKTILYSMQNYWGQIFPLPKKLIK 825
Query: 53 KIQSIFTRFLWGG 15
+++ +FLW G
Sbjct: 826 AVETTCRKFLWTG 838
>gb|AAC95175.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1352
Score = 268 bits (686), Expect = 1e-69
Identities = 131/317 (41%), Positives = 200/317 (63%)
Frame = -3
Query: 953 YKCVAKVLAGRLKSVMNQIISDNQAAFIPKRIIGDNILLAQSLCHKYHSAAGSPRCTIKL 774
YK V+K++A RLK ++ I+ NQ+AFI R++ +N+LLA L YH + S R +K+
Sbjct: 686 YKIVSKLMANRLKEILPASIAPNQSAFIKDRLMMENLLLASELVKDYHKESISSRSALKI 745
Query: 773 DISKAFDTLNWEFLLNSMLAMGFPPRFVKWIRVCLSSCMYSIKVNGSLEGYFASKSGVRQ 594
DISKAFD + W FL+N + A+ P F+ WI +C+ + +S++VNG L G+F S+ G+RQ
Sbjct: 746 DISKAFDFVQWPFLINVLKAIHLPEMFIHWIELCIGTASFSVQVNGELSGFFRSERGLRQ 805
Query: 593 GDPISPYLFAIAMQVFSMSLHHSTSSDAGFKFHWNCQKQKLHHIIFADDVLMFSYGDLNS 414
G +SPYL+ I M V S L + + + +H C+ L H+ FADD+++FS G S
Sbjct: 806 GCSLSPYLYVICMNVLSCMLDKA-AVEKKISYHPRCRNMNLTHLCFADDIMVFSDGTSKS 864
Query: 413 VSALMNGVNQFSRLSGMKLNLNKCSIFFGKVCPSVKSQILLSSGILEGNLPITYLGLPLL 234
+ + +F+ +S +K++L K +IF + P+ K+ IL G LP+ YLGLPLL
Sbjct: 865 IQGTLAIFEKFAAMSWLKISLEKSTIFMAGISPNAKTSILQQFPFELGTLPVKYLGLPLL 924
Query: 233 SSRLNSQHCMPLIQKLCARASS*TGRFLSHAGRLKLLKSVLYSMQGYWSMYLFLPKGIIK 54
+ R+ +PL++K+ AR +S T RFLS AGRL+L+KSVL S+ +W LPK ++
Sbjct: 925 TKRMTQSDYLPLVEKIRARITSWTNRFLSFAGRLQLIKSVLSSITNFWLSVFRLPKACLQ 984
Query: 53 KIQSIFTRFLWGGPSLN 3
+I+ +F+ FLW GP LN
Sbjct: 985 EIEKMFSAFLWSGPDLN 1001
>gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]
Length = 740
Score = 267 bits (682), Expect = 3e-69
Identities = 130/317 (41%), Positives = 201/317 (63%)
Frame = -3
Query: 953 YKCVAKVLAGRLKSVMNQIISDNQAAFIPKRIIGDNILLAQSLCHKYHSAAGSPRCTIKL 774
YK ++K++A RLK ++ I NQ+AF+ +R++ +N+LLA L YH + SPRC +K+
Sbjct: 112 YKVISKIIANRLKVMLPTFILQNQSAFVRERLLIENVLLATELVKDYHKDSISPRCAMKI 171
Query: 773 DISKAFDTLNWEFLLNSMLAMGFPPRFVKWIRVCLSSCMYSIKVNGSLEGYFASKSGVRQ 594
DISKAFD++ W+FLLN++ A+ FP F WI++C+S+ +S++VNG L G+F SK G+RQ
Sbjct: 172 DISKAFDSVQWQFLLNTLEALNFPENFCHWIKLCISTATFSVQVNGELAGFFGSKRGLRQ 231
Query: 593 GDPISPYLFAIAMQVFSMSLHHSTSSDAGFKFHWNCQKQKLHHIIFADDVLMFSYGDLNS 414
G +SPYLF I M V S + + +H C+K L H+ FADD+++F G S
Sbjct: 232 GCALSPYLFVICMNVLSHMI-DVAAVHRNIGYHPKCKKLSLTHLCFADDLMVFIDGQQRS 290
Query: 413 VSALMNGVNQFSRLSGMKLNLNKCSIFFGKVCPSVKSQILLSSGILEGNLPITYLGLPLL 234
V ++N +F+ SG+ ++L K +++ V ++ IL + G LP+ YLGLPLL
Sbjct: 291 VEGVINIFKEFAGKSGLHISLEKSTLYLAGVSELNRNNILSAFPFASGQLPVRYLGLPLL 350
Query: 233 SSRLNSQHCMPLIQKLCARASS*TGRFLSHAGRLKLLKSVLYSMQGYWSMYLFLPKGIIK 54
+ ++ + PL+ K+ ++ SS T R LS+AGRL L+ SV+ S+ +W LP G IK
Sbjct: 351 TKQMTTADYSPLLDKVRSKISSWTARSLSYAGRLALINSVIVSLSNFWMSAYRLPAGCIK 410
Query: 53 KIQSIFTRFLWGGPSLN 3
+I+ + + FLW GP LN
Sbjct: 411 EIEKLCSAFLWSGPELN 427
>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
thaliana]
Length = 1223
Score = 266 bits (681), Expect = 4e-69
Identities = 123/317 (38%), Positives = 204/317 (64%)
Frame = -3
Query: 953 YKCVAKVLAGRLKSVMNQIISDNQAAFIPKRIIGDNILLAQSLCHKYHSAAGSPRCTIKL 774
YK ++K++A RLK V+ + I+ NQ+AF+ R++ +N+LLA L YH S RC IK+
Sbjct: 539 YKVISKIIANRLKLVLPKFIAGNQSAFVKDRLLIENLLLATELVKDYHKDTISTRCAIKI 598
Query: 773 DISKAFDTLNWEFLLNSMLAMGFPPRFVKWIRVCLSSCMYSIKVNGSLEGYFASKSGVRQ 594
DISKAFD++ W FL+N +GFP F+ WI +C+++ +S++VNG L GYF S G+RQ
Sbjct: 599 DISKAFDSVQWPFLINVFTILGFPREFIHWINICITTASFSVQVNGELAGYFQSSRGLRQ 658
Query: 593 GDPISPYLFAIAMQVFSMSLHHSTSSDAGFKFHWNCQKQKLHHIIFADDVLMFSYGDLNS 414
G +SPYLF I M V S L + ++ F +H C+ L H+ FADD+++ S G + S
Sbjct: 659 GCALSPYLFVICMDVLSKMLDKAAAA-RHFGYHPKCKTMGLTHLSFADDLMVLSDGKIRS 717
Query: 413 VSALMNGVNQFSRLSGMKLNLNKCSIFFGKVCPSVKSQILLSSGILEGNLPITYLGLPLL 234
+ ++ ++F++ SG++++L K +++ + + ++++ G LP+ YLGLPL+
Sbjct: 718 IERIIKVFDEFAKWSGLRISLEKSTVYLAGLSATARNEVADRFPFSSGQLPVRYLGLPLI 777
Query: 233 SSRLNSQHCMPLIQKLCARASS*TGRFLSHAGRLKLLKSVLYSMQGYWSMYLFLPKGIIK 54
+ RL++ C+PL++++ R S T RFLS+AGRL L+ SVL+S+ +W LP+ I+
Sbjct: 778 TKRLSTTDCLPLLEQVRKRIGSWTSRFLSYAGRLNLISSVLWSICNFWLAAFRLPRKCIR 837
Query: 53 KIQSIFTRFLWGGPSLN 3
+++ + + FLW G +N
Sbjct: 838 ELEKMCSAFLWSGTEMN 854
>gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]
Length = 872
Score = 265 bits (676), Expect = 2e-68
Identities = 128/317 (40%), Positives = 201/317 (63%)
Frame = -3
Query: 953 YKCVAKVLAGRLKSVMNQIISDNQAAFIPKRIIGDNILLAQSLCHKYHSAAGSPRCTIKL 774
YK ++K++A RLK ++ + I++NQ+AF+ R++ +N+LLA L YH + S RC IK+
Sbjct: 186 YKVISKIIANRLKLLLPRFIAENQSAFVKDRLLIENLLLATELVKDYHKDSISARCAIKI 245
Query: 773 DISKAFDTLNWEFLLNSMLAMGFPPRFVKWIRVCLSSCMYSIKVNGSLEGYFASKSGVRQ 594
DISKAFD++ W FL N+++AM F P F+ WI +C+++ +S++VNG L GYF SK G+RQ
Sbjct: 246 DISKAFDSVQWSFLTNTLVAMNFSPTFIHWINLCITTASFSVQVNGDLVGYFQSKRGLRQ 305
Query: 593 GDPISPYLFAIAMQVFSMSLHHSTSSDAGFKFHWNCQKQKLHHIIFADDVLMFSYGDLNS 414
G +SPYLF I M V S L + F FH CQ+ L H+ FADD+++ S G S
Sbjct: 306 GCSLSPYLFVICMDVLSKML-DKAAGVRKFGFHPKCQRLGLTHLSFADDLMVLSDGKTRS 364
Query: 413 VSALMNGVNQFSRLSGMKLNLNKCSIFFGKVCPSVKSQILLSSGILEGNLPITYLGLPLL 234
+ ++ ++F + SG++++L K +++ V P +K +I G LP+ YLGLPL+
Sbjct: 365 IEGILEVFDEFCKRSGLRISLEKSTLYMAGVSPIIKQEIAAKFLFDVGQLPVRYLGLPLV 424
Query: 233 SSRLNSQHCMPLIQKLCARASS*TGRFLSHAGRLKLLKSVLYSMQGYWSMYLFLPKGIIK 54
+ RL S PL++++ R ++ T RF S AGR L+KSVL+S+ +W LP+ I+
Sbjct: 425 TKRLTSADYSPLLEQIKKRIATWTFRFFSFAGRFNLIKSVLWSICNFWLAAFRLPRQCIR 484
Query: 53 KIQSIFTRFLWGGPSLN 3
+I + + FLW G ++
Sbjct: 485 EIDKLCSSFLWSGSEMS 501