BLASTX nr result

ID: Bupleurum21_contig00032198 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00032198
         (396 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003546575.1| PREDICTED: protein MEI2-like 2-like [Glycine...    75   1e-20
gb|AAT39006.1| AML1 [Solanum tuberosum]                                80   2e-20
ref|XP_002519750.1| RNA-binding protein, putative [Ricinus commu...    78   4e-19
gb|AAT39004.1| AML1 [Citrus unshiu]                                    69   7e-18
ref|XP_002302143.1| predicted protein [Populus trichocarpa] gi|2...    72   7e-18

>ref|XP_003546575.1| PREDICTED: protein MEI2-like 2-like [Glycine max]
          Length = 862

 Score = 75.1 bits (183), Expect(2) = 1e-20
 Identities = 36/56 (64%), Positives = 41/56 (73%)
 Frame = -2

Query: 170 ADAIDLHEDVEAHAIGSLLPDDEDELLAGIVDGFDLSGVSNHMDDLEEYDFFGSGG 3
           AD     ED + HAIG  LPDDE+ELLAGI D FDLSG+   ++DLEEYD FGSGG
Sbjct: 85  ADGNGSLEDGDTHAIGPALPDDEEELLAGITDDFDLSGLPGSLEDLEEYDLFGSGG 140



 Score = 49.7 bits (117), Expect(2) = 1e-20
 Identities = 20/40 (50%), Positives = 30/40 (75%)
 Frame = -1

Query: 396 DTTLFSSSLPVLPHGKMDINRVEDGFQSVDDLFPTMNEVH 277
           D +LFSSSLPVLPH K+++N   +G+QS+DD+     ++H
Sbjct: 43  DASLFSSSLPVLPHEKLNLNETANGYQSIDDISSGFKKLH 82


>gb|AAT39006.1| AML1 [Solanum tuberosum]
          Length = 843

 Score = 80.1 bits (196), Expect(2) = 2e-20
 Identities = 40/57 (70%), Positives = 43/57 (75%)
 Frame = -2

Query: 173 GADAIDLHEDVEAHAIGSLLPDDEDELLAGIVDGFDLSGVSNHMDDLEEYDFFGSGG 3
           G +   L +D E  AIGSLLPDDEDELLAGI+DGFD S   NH DDLEEYD FGSGG
Sbjct: 71  GVEVDVLLDDGENRAIGSLLPDDEDELLAGIMDGFDPSQFPNHTDDLEEYDLFGSGG 127



 Score = 43.5 bits (101), Expect(2) = 2e-20
 Identities = 19/40 (47%), Positives = 28/40 (70%)
 Frame = -1

Query: 396 DTTLFSSSLPVLPHGKMDINRVEDGFQSVDDLFPTMNEVH 277
           D +LFSSS+PVL H K+ ++  + G QSVDD  P++  +H
Sbjct: 30  DASLFSSSVPVLQHEKLKVSDGDHGHQSVDDASPSLKIIH 69


>ref|XP_002519750.1| RNA-binding protein, putative [Ricinus communis]
           gi|223541167|gb|EEF42723.1| RNA-binding protein,
           putative [Ricinus communis]
          Length = 723

 Score = 77.8 bits (190), Expect(2) = 4e-19
 Identities = 35/52 (67%), Positives = 45/52 (86%)
 Frame = -2

Query: 158 DLHEDVEAHAIGSLLPDDEDELLAGIVDGFDLSGVSNHMDDLEEYDFFGSGG 3
           D+ EDVE HAIGSLLPDDE++LLAGI++ FDL+ + N ++DLE+YD FGSGG
Sbjct: 94  DVLEDVEPHAIGSLLPDDENDLLAGIMEDFDLTRLPNSLEDLEDYDLFGSGG 145



 Score = 41.6 bits (96), Expect(2) = 4e-19
 Identities = 20/39 (51%), Positives = 28/39 (71%)
 Frame = -1

Query: 396 DTTLFSSSLPVLPHGKMDINRVEDGFQSVDDLFPTMNEV 280
           DT LFSSSLPVLPH K+++N  E   Q VDD   +++++
Sbjct: 49  DTILFSSSLPVLPHEKLNLNDTECVCQFVDDATSSLDKL 87


>gb|AAT39004.1| AML1 [Citrus unshiu]
          Length = 858

 Score = 69.3 bits (168), Expect(2) = 7e-18
 Identities = 33/57 (57%), Positives = 42/57 (73%)
 Frame = -2

Query: 173 GADAIDLHEDVEAHAIGSLLPDDEDELLAGIVDGFDLSGVSNHMDDLEEYDFFGSGG 3
           G  + D  E +   AIG+ LPDDEDELLAGI+D FDL G+ + ++DLE+YD FGSGG
Sbjct: 83  GVSSDDPLEGIMNPAIGNSLPDDEDELLAGIMDDFDLRGLPSSLEDLEDYDIFGSGG 139



 Score = 45.8 bits (107), Expect(2) = 7e-18
 Identities = 21/40 (52%), Positives = 31/40 (77%)
 Frame = -1

Query: 396 DTTLFSSSLPVLPHGKMDINRVEDGFQSVDDLFPTMNEVH 277
           D +LFSSSLPVLPH K+++N +  G QSVD++   +++VH
Sbjct: 42  DASLFSSSLPVLPHEKLNLNAMGLGRQSVDNISSGLSKVH 81


>ref|XP_002302143.1| predicted protein [Populus trichocarpa] gi|222843869|gb|EEE81416.1|
           predicted protein [Populus trichocarpa]
          Length = 763

 Score = 72.4 bits (176), Expect(2) = 7e-18
 Identities = 35/55 (63%), Positives = 44/55 (80%)
 Frame = -2

Query: 167 DAIDLHEDVEAHAIGSLLPDDEDELLAGIVDGFDLSGVSNHMDDLEEYDFFGSGG 3
           +  DL ED+E  AIG+LLPDD DELL+GI+D FDLSG+ + ++DLEE DFFG GG
Sbjct: 53  EVTDLFEDIEPSAIGNLLPDD-DELLSGIMDDFDLSGLPSQVEDLEECDFFGPGG 106



 Score = 42.7 bits (99), Expect(2) = 7e-18
 Identities = 19/39 (48%), Positives = 28/39 (71%)
 Frame = -1

Query: 396 DTTLFSSSLPVLPHGKMDINRVEDGFQSVDDLFPTMNEV 280
           D  LFSSSLPVLPH K++ +  E+  +S+DD  P +N++
Sbjct: 10  DARLFSSSLPVLPHEKLNFHESENCGRSIDDSSPNLNKL 48


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