BLASTX nr result
ID: Bupleurum21_contig00032189
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Bupleurum21_contig00032189 (900 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002273025.2| PREDICTED: LOW QUALITY PROTEIN: putative ATP... 336 4e-90 emb|CBI15349.3| unnamed protein product [Vitis vinifera] 330 4e-88 ref|XP_004138330.1| PREDICTED: LOW QUALITY PROTEIN: putative ATP... 309 5e-82 ref|XP_002318577.1| predicted protein [Populus trichocarpa] gi|2... 303 3e-80 ref|XP_002514608.1| dead box ATP-dependent RNA helicase, putativ... 292 6e-77 >ref|XP_002273025.2| PREDICTED: LOW QUALITY PROTEIN: putative ATP-dependent helicase HRQ1-like [Vitis vinifera] Length = 1231 Score = 336 bits (862), Expect = 4e-90 Identities = 157/223 (70%), Positives = 182/223 (81%) Frame = +3 Query: 3 LCLEADLKYYTKTRDYTDVHVTGGKIAYPARVSGGPFHRTSAQARTCKVTTTWFGFRRIW 182 LC +ADLKYYTKTRDYTD+HV GG+IAY AR+S F RT+AQ C+VTTTWFGFRRIW Sbjct: 999 LCQQADLKYYTKTRDYTDIHVIGGEIAYQARISRIQFARTTAQVHDCRVTTTWFGFRRIW 1058 Query: 183 RGSNQVFDTVELSLPDYSYNSQAVWLRVAQSLKTAVETKGYSFRGGLHAACHALLNVVPL 362 +GSN+VFDTVELSLP YSY SQAVW+RV QS+KTAVE +SFR GLHAA HA+LNVVPL Sbjct: 1059 KGSNKVFDTVELSLPTYSYQSQAVWVRVPQSVKTAVEIHRFSFRAGLHAASHAVLNVVPL 1118 Query: 363 YIICNSSDIASECANPYDSRYIPERILLYDPHPGGTGISAQIQPLFTXXXXXXXXXXXXX 542 Y+ICNSSD+A EC+NP+D+RYIPERILLYDPHPGGTG SAQ++ FT Sbjct: 1119 YVICNSSDLAPECSNPHDTRYIPERILLYDPHPGGTGFSAQVRSHFTELLTAALELLMSC 1178 Query: 543 XXXGDAGCPNCVQNLSCQEYNEVLHKDAAVMIIKGVLDEEKSY 671 GD GCPNC+QNL+C EYNE+LHKDAA+MIIKGVL+ E+SY Sbjct: 1179 CCTGDTGCPNCIQNLACGEYNELLHKDAAIMIIKGVLEAEESY 1221 >emb|CBI15349.3| unnamed protein product [Vitis vinifera] Length = 1188 Score = 330 bits (845), Expect = 4e-88 Identities = 157/229 (68%), Positives = 182/229 (79%), Gaps = 6/229 (2%) Frame = +3 Query: 3 LCLEADLKYYTKTRDYTDVHVTGGKIAYPARVSGGPFHRTSAQARTCKVTTTWFGFRRIW 182 LC +ADLKYYTKTRDYTD+HV GG+IAY AR+S F RT+AQ C+VTTTWFGFRRIW Sbjct: 950 LCQQADLKYYTKTRDYTDIHVIGGEIAYQARISRIQFARTTAQVHDCRVTTTWFGFRRIW 1009 Query: 183 RGSNQVFDTVELSLPDYSYNSQAVWLRVAQSLKTAVETKGYSFRGGLHAACHALLNVVPL 362 +GSN+VFDTVELSLP YSY SQAVW+RV QS+KTAVE +SFR GLHAA HA+LNVVPL Sbjct: 1010 KGSNKVFDTVELSLPTYSYQSQAVWVRVPQSVKTAVEIHRFSFRAGLHAASHAVLNVVPL 1069 Query: 363 YIICNSSDIASECANPYDSRYIPERILLYDPHPGGTGISAQ------IQPLFTXXXXXXX 524 Y+ICNSSD+A EC+NP+D+RYIPERILLYDPHPGGTG SAQ ++ FT Sbjct: 1070 YVICNSSDLAPECSNPHDTRYIPERILLYDPHPGGTGFSAQANTSLSVRSHFTELLTAAL 1129 Query: 525 XXXXXXXXXGDAGCPNCVQNLSCQEYNEVLHKDAAVMIIKGVLDEEKSY 671 GD GCPNC+QNL+C EYNE+LHKDAA+MIIKGVL+ E+SY Sbjct: 1130 ELLMSCCCTGDTGCPNCIQNLACGEYNELLHKDAAIMIIKGVLEAEESY 1178 >ref|XP_004138330.1| PREDICTED: LOW QUALITY PROTEIN: putative ATP-dependent helicase HRQ1-like [Cucumis sativus] Length = 1218 Score = 309 bits (792), Expect = 5e-82 Identities = 146/222 (65%), Positives = 170/222 (76%) Frame = +3 Query: 6 CLEADLKYYTKTRDYTDVHVTGGKIAYPARVSGGPFHRTSAQARTCKVTTTWFGFRRIWR 185 C EADLKYYTKTRDYTD+HV GG +AYP R P +T+AQA C+VTTTWFGF RI + Sbjct: 995 CEEADLKYYTKTRDYTDIHVIGGNLAYPRRAPNIPPSKTTAQANDCRVTTTWFGFYRIQK 1054 Query: 186 GSNQVFDTVELSLPDYSYNSQAVWLRVAQSLKTAVETKGYSFRGGLHAACHALLNVVPLY 365 GSNQ+ D+V+LSLP YSYNSQAVW+ V QS+K V+ K ++FR GLH A HALLNVVPL Sbjct: 1055 GSNQILDSVDLSLPKYSYNSQAVWIPVPQSVKEEVKRKNFNFRAGLHGASHALLNVVPLR 1114 Query: 366 IICNSSDIASECANPYDSRYIPERILLYDPHPGGTGISAQIQPLFTXXXXXXXXXXXXXX 545 IICN SD+A ECANP+D+RY PERILLYD HPGGTG+S QIQP+F Sbjct: 1115 IICNMSDLAPECANPHDTRYFPERILLYDQHPGGTGMSLQIQPVFIELLNAAFELLTSCR 1174 Query: 546 XXGDAGCPNCVQNLSCQEYNEVLHKDAAVMIIKGVLDEEKSY 671 G+ GCPNCVQ+L+C EYNEVLHKDAA +IIKGVLD EK+Y Sbjct: 1175 CYGETGCPNCVQSLACHEYNEVLHKDAASLIIKGVLDAEKAY 1216 >ref|XP_002318577.1| predicted protein [Populus trichocarpa] gi|222859250|gb|EEE96797.1| predicted protein [Populus trichocarpa] Length = 460 Score = 303 bits (777), Expect = 3e-80 Identities = 146/225 (64%), Positives = 167/225 (74%) Frame = +3 Query: 3 LCLEADLKYYTKTRDYTDVHVTGGKIAYPARVSGGPFHRTSAQARTCKVTTTWFGFRRIW 182 LC EA+L YYTKTRDYTD+ V GG IAYP R RT+AQA +CKVTTTWFGF I Sbjct: 231 LCYEANLHYYTKTRDYTDIDVLGGDIAYPPRAFKNQSSRTAAQALSCKVTTTWFGFYCIQ 290 Query: 183 RGSNQVFDTVELSLPDYSYNSQAVWLRVAQSLKTAVETKGYSFRGGLHAACHALLNVVPL 362 RGSN+V DT +LSLP YSY SQAVW+ V QS+K VE K +SFRGGLHAA HALLNVVPL Sbjct: 291 RGSNKVLDTFDLSLPKYSYESQAVWIPVPQSIKKLVEEKQFSFRGGLHAASHALLNVVPL 350 Query: 363 YIICNSSDIASECANPYDSRYIPERILLYDPHPGGTGISAQIQPLFTXXXXXXXXXXXXX 542 Y+ CNSSD+A EC NP+DSRY PERIL+YD HPGGTG+S QIQP FT Sbjct: 351 YLRCNSSDLAPECPNPHDSRYFPERILVYDQHPGGTGVSMQIQPYFTELLNAALELLTCC 410 Query: 543 XXXGDAGCPNCVQNLSCQEYNEVLHKDAAVMIIKGVLDEEKSYTE 677 GD GCPNCVQ++ C EYNEV+HKDAA+MI++GVLD E + E Sbjct: 411 HCSGDTGCPNCVQSMVCHEYNEVIHKDAAIMILEGVLDAESFFGE 455 >ref|XP_002514608.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis] gi|223546212|gb|EEF47714.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis] Length = 1189 Score = 292 bits (748), Expect = 6e-77 Identities = 139/230 (60%), Positives = 171/230 (74%) Frame = +3 Query: 3 LCLEADLKYYTKTRDYTDVHVTGGKIAYPARVSGGPFHRTSAQARTCKVTTTWFGFRRIW 182 LC ADL+YYTKTRDYTD+HV GG IAY ARVS +T+AQA CKVTT WFGF RI Sbjct: 952 LCRRADLQYYTKTRDYTDIHVLGGGIAYSARVSKNQSLKTTAQANYCKVTTIWFGFYRIE 1011 Query: 183 RGSNQVFDTVELSLPDYSYNSQAVWLRVAQSLKTAVETKGYSFRGGLHAACHALLNVVPL 362 RG+ ++ D +LSLP YSY SQAVW++V QS+K +V+ K + FR GLHAA HA+L VVPL Sbjct: 1012 RGTKRILDKCDLSLPKYSYESQAVWIQVPQSVKISVQ-KYFPFRKGLHAASHAILKVVPL 1070 Query: 363 YIICNSSDIASECANPYDSRYIPERILLYDPHPGGTGISAQIQPLFTXXXXXXXXXXXXX 542 Y+ CN SD+A EC NP+D+R+ PERIL+YD HPGGTG+S QIQP FT Sbjct: 1071 YVFCNYSDLAPECPNPHDTRFFPERILVYDQHPGGTGVSVQIQPYFTELLNAALELLTSC 1130 Query: 543 XXXGDAGCPNCVQNLSCQEYNEVLHKDAAVMIIKGVLDEEKSYTEEVHKS 692 G GCP+CVQ+++C EYNEVLHK+AA+MIIKGV+D E+SY +E+H S Sbjct: 1131 HCSGITGCPHCVQSMACHEYNEVLHKNAAIMIIKGVMDAEESYFKEIHDS 1180