BLASTX nr result

ID: Bupleurum21_contig00032189 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00032189
         (900 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273025.2| PREDICTED: LOW QUALITY PROTEIN: putative ATP...   336   4e-90
emb|CBI15349.3| unnamed protein product [Vitis vinifera]              330   4e-88
ref|XP_004138330.1| PREDICTED: LOW QUALITY PROTEIN: putative ATP...   309   5e-82
ref|XP_002318577.1| predicted protein [Populus trichocarpa] gi|2...   303   3e-80
ref|XP_002514608.1| dead box ATP-dependent RNA helicase, putativ...   292   6e-77

>ref|XP_002273025.2| PREDICTED: LOW QUALITY PROTEIN: putative ATP-dependent helicase
            HRQ1-like [Vitis vinifera]
          Length = 1231

 Score =  336 bits (862), Expect = 4e-90
 Identities = 157/223 (70%), Positives = 182/223 (81%)
 Frame = +3

Query: 3    LCLEADLKYYTKTRDYTDVHVTGGKIAYPARVSGGPFHRTSAQARTCKVTTTWFGFRRIW 182
            LC +ADLKYYTKTRDYTD+HV GG+IAY AR+S   F RT+AQ   C+VTTTWFGFRRIW
Sbjct: 999  LCQQADLKYYTKTRDYTDIHVIGGEIAYQARISRIQFARTTAQVHDCRVTTTWFGFRRIW 1058

Query: 183  RGSNQVFDTVELSLPDYSYNSQAVWLRVAQSLKTAVETKGYSFRGGLHAACHALLNVVPL 362
            +GSN+VFDTVELSLP YSY SQAVW+RV QS+KTAVE   +SFR GLHAA HA+LNVVPL
Sbjct: 1059 KGSNKVFDTVELSLPTYSYQSQAVWVRVPQSVKTAVEIHRFSFRAGLHAASHAVLNVVPL 1118

Query: 363  YIICNSSDIASECANPYDSRYIPERILLYDPHPGGTGISAQIQPLFTXXXXXXXXXXXXX 542
            Y+ICNSSD+A EC+NP+D+RYIPERILLYDPHPGGTG SAQ++  FT             
Sbjct: 1119 YVICNSSDLAPECSNPHDTRYIPERILLYDPHPGGTGFSAQVRSHFTELLTAALELLMSC 1178

Query: 543  XXXGDAGCPNCVQNLSCQEYNEVLHKDAAVMIIKGVLDEEKSY 671
               GD GCPNC+QNL+C EYNE+LHKDAA+MIIKGVL+ E+SY
Sbjct: 1179 CCTGDTGCPNCIQNLACGEYNELLHKDAAIMIIKGVLEAEESY 1221


>emb|CBI15349.3| unnamed protein product [Vitis vinifera]
          Length = 1188

 Score =  330 bits (845), Expect = 4e-88
 Identities = 157/229 (68%), Positives = 182/229 (79%), Gaps = 6/229 (2%)
 Frame = +3

Query: 3    LCLEADLKYYTKTRDYTDVHVTGGKIAYPARVSGGPFHRTSAQARTCKVTTTWFGFRRIW 182
            LC +ADLKYYTKTRDYTD+HV GG+IAY AR+S   F RT+AQ   C+VTTTWFGFRRIW
Sbjct: 950  LCQQADLKYYTKTRDYTDIHVIGGEIAYQARISRIQFARTTAQVHDCRVTTTWFGFRRIW 1009

Query: 183  RGSNQVFDTVELSLPDYSYNSQAVWLRVAQSLKTAVETKGYSFRGGLHAACHALLNVVPL 362
            +GSN+VFDTVELSLP YSY SQAVW+RV QS+KTAVE   +SFR GLHAA HA+LNVVPL
Sbjct: 1010 KGSNKVFDTVELSLPTYSYQSQAVWVRVPQSVKTAVEIHRFSFRAGLHAASHAVLNVVPL 1069

Query: 363  YIICNSSDIASECANPYDSRYIPERILLYDPHPGGTGISAQ------IQPLFTXXXXXXX 524
            Y+ICNSSD+A EC+NP+D+RYIPERILLYDPHPGGTG SAQ      ++  FT       
Sbjct: 1070 YVICNSSDLAPECSNPHDTRYIPERILLYDPHPGGTGFSAQANTSLSVRSHFTELLTAAL 1129

Query: 525  XXXXXXXXXGDAGCPNCVQNLSCQEYNEVLHKDAAVMIIKGVLDEEKSY 671
                     GD GCPNC+QNL+C EYNE+LHKDAA+MIIKGVL+ E+SY
Sbjct: 1130 ELLMSCCCTGDTGCPNCIQNLACGEYNELLHKDAAIMIIKGVLEAEESY 1178


>ref|XP_004138330.1| PREDICTED: LOW QUALITY PROTEIN: putative ATP-dependent helicase
            HRQ1-like [Cucumis sativus]
          Length = 1218

 Score =  309 bits (792), Expect = 5e-82
 Identities = 146/222 (65%), Positives = 170/222 (76%)
 Frame = +3

Query: 6    CLEADLKYYTKTRDYTDVHVTGGKIAYPARVSGGPFHRTSAQARTCKVTTTWFGFRRIWR 185
            C EADLKYYTKTRDYTD+HV GG +AYP R    P  +T+AQA  C+VTTTWFGF RI +
Sbjct: 995  CEEADLKYYTKTRDYTDIHVIGGNLAYPRRAPNIPPSKTTAQANDCRVTTTWFGFYRIQK 1054

Query: 186  GSNQVFDTVELSLPDYSYNSQAVWLRVAQSLKTAVETKGYSFRGGLHAACHALLNVVPLY 365
            GSNQ+ D+V+LSLP YSYNSQAVW+ V QS+K  V+ K ++FR GLH A HALLNVVPL 
Sbjct: 1055 GSNQILDSVDLSLPKYSYNSQAVWIPVPQSVKEEVKRKNFNFRAGLHGASHALLNVVPLR 1114

Query: 366  IICNSSDIASECANPYDSRYIPERILLYDPHPGGTGISAQIQPLFTXXXXXXXXXXXXXX 545
            IICN SD+A ECANP+D+RY PERILLYD HPGGTG+S QIQP+F               
Sbjct: 1115 IICNMSDLAPECANPHDTRYFPERILLYDQHPGGTGMSLQIQPVFIELLNAAFELLTSCR 1174

Query: 546  XXGDAGCPNCVQNLSCQEYNEVLHKDAAVMIIKGVLDEEKSY 671
              G+ GCPNCVQ+L+C EYNEVLHKDAA +IIKGVLD EK+Y
Sbjct: 1175 CYGETGCPNCVQSLACHEYNEVLHKDAASLIIKGVLDAEKAY 1216


>ref|XP_002318577.1| predicted protein [Populus trichocarpa] gi|222859250|gb|EEE96797.1|
           predicted protein [Populus trichocarpa]
          Length = 460

 Score =  303 bits (777), Expect = 3e-80
 Identities = 146/225 (64%), Positives = 167/225 (74%)
 Frame = +3

Query: 3   LCLEADLKYYTKTRDYTDVHVTGGKIAYPARVSGGPFHRTSAQARTCKVTTTWFGFRRIW 182
           LC EA+L YYTKTRDYTD+ V GG IAYP R       RT+AQA +CKVTTTWFGF  I 
Sbjct: 231 LCYEANLHYYTKTRDYTDIDVLGGDIAYPPRAFKNQSSRTAAQALSCKVTTTWFGFYCIQ 290

Query: 183 RGSNQVFDTVELSLPDYSYNSQAVWLRVAQSLKTAVETKGYSFRGGLHAACHALLNVVPL 362
           RGSN+V DT +LSLP YSY SQAVW+ V QS+K  VE K +SFRGGLHAA HALLNVVPL
Sbjct: 291 RGSNKVLDTFDLSLPKYSYESQAVWIPVPQSIKKLVEEKQFSFRGGLHAASHALLNVVPL 350

Query: 363 YIICNSSDIASECANPYDSRYIPERILLYDPHPGGTGISAQIQPLFTXXXXXXXXXXXXX 542
           Y+ CNSSD+A EC NP+DSRY PERIL+YD HPGGTG+S QIQP FT             
Sbjct: 351 YLRCNSSDLAPECPNPHDSRYFPERILVYDQHPGGTGVSMQIQPYFTELLNAALELLTCC 410

Query: 543 XXXGDAGCPNCVQNLSCQEYNEVLHKDAAVMIIKGVLDEEKSYTE 677
              GD GCPNCVQ++ C EYNEV+HKDAA+MI++GVLD E  + E
Sbjct: 411 HCSGDTGCPNCVQSMVCHEYNEVIHKDAAIMILEGVLDAESFFGE 455


>ref|XP_002514608.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
            gi|223546212|gb|EEF47714.1| dead box ATP-dependent RNA
            helicase, putative [Ricinus communis]
          Length = 1189

 Score =  292 bits (748), Expect = 6e-77
 Identities = 139/230 (60%), Positives = 171/230 (74%)
 Frame = +3

Query: 3    LCLEADLKYYTKTRDYTDVHVTGGKIAYPARVSGGPFHRTSAQARTCKVTTTWFGFRRIW 182
            LC  ADL+YYTKTRDYTD+HV GG IAY ARVS     +T+AQA  CKVTT WFGF RI 
Sbjct: 952  LCRRADLQYYTKTRDYTDIHVLGGGIAYSARVSKNQSLKTTAQANYCKVTTIWFGFYRIE 1011

Query: 183  RGSNQVFDTVELSLPDYSYNSQAVWLRVAQSLKTAVETKGYSFRGGLHAACHALLNVVPL 362
            RG+ ++ D  +LSLP YSY SQAVW++V QS+K +V+ K + FR GLHAA HA+L VVPL
Sbjct: 1012 RGTKRILDKCDLSLPKYSYESQAVWIQVPQSVKISVQ-KYFPFRKGLHAASHAILKVVPL 1070

Query: 363  YIICNSSDIASECANPYDSRYIPERILLYDPHPGGTGISAQIQPLFTXXXXXXXXXXXXX 542
            Y+ CN SD+A EC NP+D+R+ PERIL+YD HPGGTG+S QIQP FT             
Sbjct: 1071 YVFCNYSDLAPECPNPHDTRFFPERILVYDQHPGGTGVSVQIQPYFTELLNAALELLTSC 1130

Query: 543  XXXGDAGCPNCVQNLSCQEYNEVLHKDAAVMIIKGVLDEEKSYTEEVHKS 692
               G  GCP+CVQ+++C EYNEVLHK+AA+MIIKGV+D E+SY +E+H S
Sbjct: 1131 HCSGITGCPHCVQSMACHEYNEVLHKNAAIMIIKGVMDAEESYFKEIHDS 1180


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