BLASTX nr result

ID: Bupleurum21_contig00032186 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00032186
         (374 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN64335.1| hypothetical protein VITISV_001808 [Vitis vinifera]   170   1e-40
gb|AAO73521.1| gag-pol polyprotein [Glycine max]                      169   2e-40
gb|AAO73523.1| gag-pol polyprotein [Glycine max]                      169   2e-40
gb|AAO73527.1| gag-pol polyprotein [Glycine max]                      169   2e-40
gb|AAO73525.1| gag-pol polyprotein [Glycine max]                      169   3e-40

>emb|CAN64335.1| hypothetical protein VITISV_001808 [Vitis vinifera]
          Length = 1885

 Score =  170 bits (430), Expect = 1e-40
 Identities = 75/122 (61%), Positives = 104/122 (85%)
 Frame = -3

Query: 369  VLGDLRKGVQTRAQVQNTVGHSAFLSQVEPKSVKEAFLDEDWIAAMQDELTQFSRNEVWK 190
            ++G+   GV+TR+ ++N   + AF+SQ+EPK++K+A +DE+W+ AMQ EL QF R+EVW+
Sbjct: 934  IIGNPLSGVRTRSSLRNICNNLAFISQIEPKNIKDAIVDENWMIAMQKELNQFERSEVWE 993

Query: 189  LVPPPDHGSIIGTKWVFKNKLDESGVVVRNKARLVAQGYTQMEGIDFEETYAPVARIESI 10
            LVP P + S+IGTKWVF+NK+DE+G++VRNKARLVAQGY Q EGID+EET+APVAR+E+I
Sbjct: 994  LVPRPSNQSVIGTKWVFRNKMDENGIIVRNKARLVAQGYNQEEGIDYEETFAPVARLEAI 1053

Query: 9    RM 4
            RM
Sbjct: 1054 RM 1055


>gb|AAO73521.1| gag-pol polyprotein [Glycine max]
          Length = 1574

 Score =  169 bits (428), Expect = 2e-40
 Identities = 77/122 (63%), Positives = 101/122 (82%)
 Frame = -3

Query: 369  VLGDLRKGVQTRAQVQNTVGHSAFLSQVEPKSVKEAFLDEDWIAAMQDELTQFSRNEVWK 190
            ++GD  +GV TR++    V +S F+S++EPK+VKEA  DE WI AMQ+EL QF RNEVW+
Sbjct: 1037 IIGDPNRGVTTRSREVEIVSNSCFVSKIEPKNVKEALTDEFWINAMQEELEQFKRNEVWE 1096

Query: 189  LVPPPDHGSIIGTKWVFKNKLDESGVVVRNKARLVAQGYTQMEGIDFEETYAPVARIESI 10
            LVP P+  ++IGTKW+FKNK +E GV+ RNKARLVAQGYTQ+EG+DF+ET+APVAR+ESI
Sbjct: 1097 LVPRPEGTNVIGTKWIFKNKTNEEGVITRNKARLVAQGYTQIEGVDFDETFAPVARLESI 1156

Query: 9    RM 4
            R+
Sbjct: 1157 RL 1158


>gb|AAO73523.1| gag-pol polyprotein [Glycine max]
          Length = 1576

 Score =  169 bits (428), Expect = 2e-40
 Identities = 77/122 (63%), Positives = 101/122 (82%)
 Frame = -3

Query: 369  VLGDLRKGVQTRAQVQNTVGHSAFLSQVEPKSVKEAFLDEDWIAAMQDELTQFSRNEVWK 190
            ++GD  +GV TR++    V +S F+S++EPK+VKEA  DE WI AMQ+EL QF RNEVW+
Sbjct: 1039 IIGDPNRGVTTRSREVEIVSNSCFVSKIEPKNVKEALTDEFWINAMQEELEQFKRNEVWE 1098

Query: 189  LVPPPDHGSIIGTKWVFKNKLDESGVVVRNKARLVAQGYTQMEGIDFEETYAPVARIESI 10
            LVP P+  ++IGTKW+FKNK +E GV+ RNKARLVAQGYTQ+EG+DF+ET+APVAR+ESI
Sbjct: 1099 LVPRPEGTNVIGTKWIFKNKTNEEGVITRNKARLVAQGYTQIEGVDFDETFAPVARLESI 1158

Query: 9    RM 4
            R+
Sbjct: 1159 RL 1160


>gb|AAO73527.1| gag-pol polyprotein [Glycine max]
          Length = 1576

 Score =  169 bits (428), Expect = 2e-40
 Identities = 77/122 (63%), Positives = 101/122 (82%)
 Frame = -3

Query: 369  VLGDLRKGVQTRAQVQNTVGHSAFLSQVEPKSVKEAFLDEDWIAAMQDELTQFSRNEVWK 190
            ++GD  +GV TR++    V +S F+S++EPK+VKEA  DE WI AMQ+EL QF RNEVW+
Sbjct: 1039 IIGDPNRGVTTRSREVEIVSNSCFVSKIEPKNVKEALTDEFWINAMQEELEQFKRNEVWE 1098

Query: 189  LVPPPDHGSIIGTKWVFKNKLDESGVVVRNKARLVAQGYTQMEGIDFEETYAPVARIESI 10
            LVP P+  ++IGTKW+FKNK +E GV+ RNKARLVAQGYTQ+EG+DF+ET+APVAR+ESI
Sbjct: 1099 LVPRPEGTNVIGTKWIFKNKTNEEGVITRNKARLVAQGYTQIEGVDFDETFAPVARLESI 1158

Query: 9    RM 4
            R+
Sbjct: 1159 RL 1160


>gb|AAO73525.1| gag-pol polyprotein [Glycine max]
          Length = 1576

 Score =  169 bits (427), Expect = 3e-40
 Identities = 77/122 (63%), Positives = 101/122 (82%)
 Frame = -3

Query: 369  VLGDLRKGVQTRAQVQNTVGHSAFLSQVEPKSVKEAFLDEDWIAAMQDELTQFSRNEVWK 190
            ++GD  +GV TR++    V +S F+S++EPK+VKEA  DE WI AMQ+EL QF RNEVW+
Sbjct: 1039 IIGDPNRGVTTRSREIEIVSNSCFVSKIEPKNVKEALTDEFWINAMQEELEQFKRNEVWE 1098

Query: 189  LVPPPDHGSIIGTKWVFKNKLDESGVVVRNKARLVAQGYTQMEGIDFEETYAPVARIESI 10
            LVP P+  ++IGTKW+FKNK +E GV+ RNKARLVAQGYTQ+EG+DF+ET+APVAR+ESI
Sbjct: 1099 LVPRPEGTNVIGTKWIFKNKTNEEGVITRNKARLVAQGYTQIEGVDFDETFAPVARLESI 1158

Query: 9    RM 4
            R+
Sbjct: 1159 RL 1160


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