BLASTX nr result

ID: Bupleurum21_contig00032163 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00032163
         (311 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN64950.1| hypothetical protein VITISV_018382 [Vitis vinifera]    61   8e-08
ref|XP_002275766.1| PREDICTED: auxilin-related protein 2-like [V...    61   1e-07
emb|CAN62180.1| hypothetical protein VITISV_043135 [Vitis vinifera]    60   1e-07
ref|XP_004165963.1| PREDICTED: LOW QUALITY PROTEIN: auxilin-rela...    60   2e-07
ref|XP_004146411.1| PREDICTED: auxilin-related protein 1-like [C...    60   2e-07

>emb|CAN64950.1| hypothetical protein VITISV_018382 [Vitis vinifera]
          Length = 977

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 41/103 (39%), Positives = 53/103 (51%), Gaps = 3/103 (2%)
 Frame = -2

Query: 304 ENKSSVSTGAFDDMDPFNDFGISMLAPSSRVKNTEKDRSPSKVRSAMKKTRESTNTAAFG 125
           +  S+V  GAF+D+DP +  G S  A  S +    K+RSPS      +     T T A  
Sbjct: 298 DGSSAVGXGAFNDLDPLDGLGKS--AFPSEMNKRGKNRSPSSTEPTSE-----TQTFATK 350

Query: 124 GPTFKTHSEGS---SQKNLPVDNDHESQQTLFGMPAASTDSQK 5
            P  K+  EG    SQK +P +N  ES QTLF +P  STDS K
Sbjct: 351 EPIEKSSVEGQDSHSQKKMPAENYWESHQTLFDIPTVSTDSHK 393


>ref|XP_002275766.1| PREDICTED: auxilin-related protein 2-like [Vitis vinifera]
          Length = 949

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 41/103 (39%), Positives = 53/103 (51%), Gaps = 3/103 (2%)
 Frame = -2

Query: 304 ENKSSVSTGAFDDMDPFNDFGISMLAPSSRVKNTEKDRSPSKVRSAMKKTRESTNTAAFG 125
           +  S+V  GAF+D+DP +  G S  A  S +    K+RSPS      +     T T A  
Sbjct: 232 DGSSAVGGGAFNDLDPLDGLGKS--AFPSEMNKRGKNRSPSSTEPTSE-----TQTFATK 284

Query: 124 GPTFKTHSEGS---SQKNLPVDNDHESQQTLFGMPAASTDSQK 5
            P  K+  EG    SQK +P +N  ES QTLF +P  STDS K
Sbjct: 285 EPIEKSSVEGQDSHSQKKMPAENYWESHQTLFDIPTVSTDSHK 327


>emb|CAN62180.1| hypothetical protein VITISV_043135 [Vitis vinifera]
          Length = 295

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 40/103 (38%), Positives = 53/103 (51%), Gaps = 3/103 (2%)
 Frame = -2

Query: 304 ENKSSVSTGAFDDMDPFNDFGISMLAPSSRVKNTEKDRSPSKVRSAMKKTRESTNTAAFG 125
           +  S+V  GAF+D+DP +  G+   A  S +    K+RSPS      +     T T A  
Sbjct: 78  DGSSAVGGGAFNDLDPLD--GLGKFAFPSEMNKRGKNRSPSSTEPTSE-----TQTFATK 130

Query: 124 GPTFKTHSEGS---SQKNLPVDNDHESQQTLFGMPAASTDSQK 5
            P  K+  EG    SQK +P +N  ES QTLF +P  STDS K
Sbjct: 131 EPIEKSSVEGQDSHSQKKMPAENYWESLQTLFDIPTVSTDSHK 173


>ref|XP_004165963.1| PREDICTED: LOW QUALITY PROTEIN: auxilin-related protein 1-like
           [Cucumis sativus]
          Length = 974

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 37/97 (38%), Positives = 49/97 (50%)
 Frame = -2

Query: 295 SSVSTGAFDDMDPFNDFGISMLAPSSRVKNTEKDRSPSKVRSAMKKTRESTNTAAFGGPT 116
           S  +  AFDDMDPF   G S+ A SS   N  K RSP +V       + S +  A   P+
Sbjct: 273 SDANNKAFDDMDPFASLGKSVPAFSSEGNNRAKARSPPRVDGTAAGPQNSNSKDAMEKPS 332

Query: 115 FKTHSEGSSQKNLPVDNDHESQQTLFGMPAASTDSQK 5
            KT S    +K++P  ND    Q +F +P  ST+S K
Sbjct: 333 TKT-SVQPLKKDVPAKNDRHFDQPVFDIPTVSTNSHK 368


>ref|XP_004146411.1| PREDICTED: auxilin-related protein 1-like [Cucumis sativus]
          Length = 974

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 37/97 (38%), Positives = 49/97 (50%)
 Frame = -2

Query: 295 SSVSTGAFDDMDPFNDFGISMLAPSSRVKNTEKDRSPSKVRSAMKKTRESTNTAAFGGPT 116
           S  +  AFDDMDPF   G S+ A SS   N  K RSP +V       + S +  A   P+
Sbjct: 273 SDANNKAFDDMDPFASLGKSVPAFSSEGNNRAKARSPPRVDGTAAGPQNSNSKDAMEKPS 332

Query: 115 FKTHSEGSSQKNLPVDNDHESQQTLFGMPAASTDSQK 5
            KT S    +K++P  ND    Q +F +P  ST+S K
Sbjct: 333 TKT-SVQPLKKDVPAKNDRHFDQPVFDIPTVSTNSHK 368


Top