BLASTX nr result

ID: Bupleurum21_contig00032154 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00032154
         (487 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16194.3| unnamed protein product [Vitis vinifera]              257   6e-67
ref|XP_002284440.1| PREDICTED: ABC transporter B family member 2...   257   6e-67
ref|XP_002284435.1| PREDICTED: ABC transporter B family member 2...   257   6e-67
emb|CAN80352.1| hypothetical protein VITISV_003140 [Vitis vinifera]   257   6e-67
ref|XP_003536773.1| PREDICTED: ABC transporter B family member 2...   256   2e-66

>emb|CBI16194.3| unnamed protein product [Vitis vinifera]
          Length = 1136

 Score =  257 bits (657), Expect = 6e-67
 Identities = 126/161 (78%), Positives = 147/161 (91%)
 Frame = +1

Query: 1   VYFSYPSRQEVPILSGFYLTIPAKKTVAIVGRTGSGKSSIIPIMERFYDPTLGEVLLDGE 180
           VYFSY SR E+PILSGFYLT+PA+KTVA+VGR GSGKSSIIP+MERFYDPTLGEVLLDG+
Sbjct: 410 VYFSYLSRPEIPILSGFYLTVPARKTVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGQ 469

Query: 181 NIKSLNLEWLRSQIGLVTYEPALLTSSIKDNISYGRANTTLIQIEEAAKVARLHAFINSL 360
           NIKSL LEWLRSQIGLVT EPALL+ SI+DNI+YGR+N T  QIEEAAK+A  HAFI+SL
Sbjct: 470 NIKSLKLEWLRSQIGLVTQEPALLSLSIRDNIAYGRSNATFDQIEEAAKIAHAHAFISSL 529

Query: 361 DKGYETKVGRSGLLLSQEQKVKLSIARAVLMNPSILLLDDI 483
           +KGYET+VGR GL L++EQK+K+S+ARAVL NPSILLLD++
Sbjct: 530 EKGYETQVGRIGLALTEEQKIKISVARAVLSNPSILLLDEV 570


>ref|XP_002284440.1| PREDICTED: ABC transporter B family member 20-like isoform 2 [Vitis
           vinifera]
          Length = 1418

 Score =  257 bits (657), Expect = 6e-67
 Identities = 126/161 (78%), Positives = 147/161 (91%)
 Frame = +1

Query: 1   VYFSYPSRQEVPILSGFYLTIPAKKTVAIVGRTGSGKSSIIPIMERFYDPTLGEVLLDGE 180
           VYFSY SR E+PILSGFYLT+PA+KTVA+VGR GSGKSSIIP+MERFYDPTLGEVLLDG+
Sbjct: 423 VYFSYLSRPEIPILSGFYLTVPARKTVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGQ 482

Query: 181 NIKSLNLEWLRSQIGLVTYEPALLTSSIKDNISYGRANTTLIQIEEAAKVARLHAFINSL 360
           NIKSL LEWLRSQIGLVT EPALL+ SI+DNI+YGR+N T  QIEEAAK+A  HAFI+SL
Sbjct: 483 NIKSLKLEWLRSQIGLVTQEPALLSLSIRDNIAYGRSNATFDQIEEAAKIAHAHAFISSL 542

Query: 361 DKGYETKVGRSGLLLSQEQKVKLSIARAVLMNPSILLLDDI 483
           +KGYET+VGR GL L++EQK+K+S+ARAVL NPSILLLD++
Sbjct: 543 EKGYETQVGRIGLALTEEQKIKISVARAVLSNPSILLLDEV 583



 Score =  159 bits (401), Expect = 3e-37
 Identities = 79/160 (49%), Positives = 113/160 (70%)
 Frame = +1

Query: 1    VYFSYPSRQEVPILSGFYLTIPAKKTVAIVGRTGSGKSSIIPIMERFYDPTLGEVLLDGE 180
            V F YP+  +  +L+ F L +   +TVAIVG +GSGKS+II ++ERFYDP  G++LLDG 
Sbjct: 1174 VDFCYPTHPKSMVLNNFSLKVNGGQTVAIVGVSGSGKSTIISLIERFYDPVSGQILLDGR 1233

Query: 181  NIKSLNLEWLRSQIGLVTYEPALLTSSIKDNISYGRANTTLIQIEEAAKVARLHAFINSL 360
            ++K  NL WLR+ +GLV  EP + +++I++NI Y R N T  +++EAA++A  H FI+SL
Sbjct: 1234 DLKLFNLRWLRNHLGLVQQEPVVFSTTIRENIIYARHNGTEAEMKEAARIANAHRFISSL 1293

Query: 361  DKGYETKVGRSGLLLSQEQKVKLSIARAVLMNPSILLLDD 480
              GY+T VG  G+ L+  QK ++SIAR VL N  ILLLD+
Sbjct: 1294 PHGYDTHVGMRGVDLTPGQKQRISIARVVLKNAPILLLDE 1333


>ref|XP_002284435.1| PREDICTED: ABC transporter B family member 20-like isoform 1 [Vitis
           vinifera]
          Length = 1405

 Score =  257 bits (657), Expect = 6e-67
 Identities = 126/161 (78%), Positives = 147/161 (91%)
 Frame = +1

Query: 1   VYFSYPSRQEVPILSGFYLTIPAKKTVAIVGRTGSGKSSIIPIMERFYDPTLGEVLLDGE 180
           VYFSY SR E+PILSGFYLT+PA+KTVA+VGR GSGKSSIIP+MERFYDPTLGEVLLDG+
Sbjct: 410 VYFSYLSRPEIPILSGFYLTVPARKTVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGQ 469

Query: 181 NIKSLNLEWLRSQIGLVTYEPALLTSSIKDNISYGRANTTLIQIEEAAKVARLHAFINSL 360
           NIKSL LEWLRSQIGLVT EPALL+ SI+DNI+YGR+N T  QIEEAAK+A  HAFI+SL
Sbjct: 470 NIKSLKLEWLRSQIGLVTQEPALLSLSIRDNIAYGRSNATFDQIEEAAKIAHAHAFISSL 529

Query: 361 DKGYETKVGRSGLLLSQEQKVKLSIARAVLMNPSILLLDDI 483
           +KGYET+VGR GL L++EQK+K+S+ARAVL NPSILLLD++
Sbjct: 530 EKGYETQVGRIGLALTEEQKIKISVARAVLSNPSILLLDEV 570



 Score =  159 bits (401), Expect = 3e-37
 Identities = 79/160 (49%), Positives = 113/160 (70%)
 Frame = +1

Query: 1    VYFSYPSRQEVPILSGFYLTIPAKKTVAIVGRTGSGKSSIIPIMERFYDPTLGEVLLDGE 180
            V F YP+  +  +L+ F L +   +TVAIVG +GSGKS+II ++ERFYDP  G++LLDG 
Sbjct: 1161 VDFCYPTHPKSMVLNNFSLKVNGGQTVAIVGVSGSGKSTIISLIERFYDPVSGQILLDGR 1220

Query: 181  NIKSLNLEWLRSQIGLVTYEPALLTSSIKDNISYGRANTTLIQIEEAAKVARLHAFINSL 360
            ++K  NL WLR+ +GLV  EP + +++I++NI Y R N T  +++EAA++A  H FI+SL
Sbjct: 1221 DLKLFNLRWLRNHLGLVQQEPVVFSTTIRENIIYARHNGTEAEMKEAARIANAHRFISSL 1280

Query: 361  DKGYETKVGRSGLLLSQEQKVKLSIARAVLMNPSILLLDD 480
              GY+T VG  G+ L+  QK ++SIAR VL N  ILLLD+
Sbjct: 1281 PHGYDTHVGMRGVDLTPGQKQRISIARVVLKNAPILLLDE 1320


>emb|CAN80352.1| hypothetical protein VITISV_003140 [Vitis vinifera]
          Length = 1447

 Score =  257 bits (657), Expect = 6e-67
 Identities = 126/161 (78%), Positives = 147/161 (91%)
 Frame = +1

Query: 1   VYFSYPSRQEVPILSGFYLTIPAKKTVAIVGRTGSGKSSIIPIMERFYDPTLGEVLLDGE 180
           VYFSY SR E+PILSGFYLT+PA+KTVA+VGR GSGKSSIIP+MERFYDPTLGEVLLDG+
Sbjct: 452 VYFSYLSRPEIPILSGFYLTVPARKTVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGQ 511

Query: 181 NIKSLNLEWLRSQIGLVTYEPALLTSSIKDNISYGRANTTLIQIEEAAKVARLHAFINSL 360
           NIKSL LEWLRSQIGLVT EPALL+ SI+DNI+YGR+N T  QIEEAAK+A  HAFI+SL
Sbjct: 512 NIKSLKLEWLRSQIGLVTQEPALLSLSIRDNIAYGRSNATFDQIEEAAKIAHAHAFISSL 571

Query: 361 DKGYETKVGRSGLLLSQEQKVKLSIARAVLMNPSILLLDDI 483
           +KGYET+VGR GL L++EQK+K+S+ARAVL NPSILLLD++
Sbjct: 572 EKGYETQVGRIGLALTEEQKIKISVARAVLSNPSILLLDEV 612



 Score =  159 bits (401), Expect = 3e-37
 Identities = 79/160 (49%), Positives = 113/160 (70%)
 Frame = +1

Query: 1    VYFSYPSRQEVPILSGFYLTIPAKKTVAIVGRTGSGKSSIIPIMERFYDPTLGEVLLDGE 180
            V F YP+  +  +L+ F L +   +TVAIVG +GSGKS+II ++ERFYDP  G++LLDG 
Sbjct: 1203 VDFCYPTHPKSMVLNNFSLKVNGGQTVAIVGVSGSGKSTIISLIERFYDPVSGQILLDGR 1262

Query: 181  NIKSLNLEWLRSQIGLVTYEPALLTSSIKDNISYGRANTTLIQIEEAAKVARLHAFINSL 360
            ++K  NL WLR+ +GLV  EP + +++I++NI Y R N T  +++EAA++A  H FI+SL
Sbjct: 1263 DLKLFNLRWLRNHLGLVQQEPVVFSTTIRENIIYARHNGTEAEMKEAARIANAHRFISSL 1322

Query: 361  DKGYETKVGRSGLLLSQEQKVKLSIARAVLMNPSILLLDD 480
              GY+T VG  G+ L+  QK ++SIAR VL N  ILLLD+
Sbjct: 1323 PHGYDTHVGMRGVDLTPGQKQRISIARVVLKNAPILLLDE 1362


>ref|XP_003536773.1| PREDICTED: ABC transporter B family member 20-like [Glycine max]
          Length = 1399

 Score =  256 bits (653), Expect = 2e-66
 Identities = 127/161 (78%), Positives = 149/161 (92%)
 Frame = +1

Query: 1   VYFSYPSRQEVPILSGFYLTIPAKKTVAIVGRTGSGKSSIIPIMERFYDPTLGEVLLDGE 180
           VYFSY SR E+PILSGFYLT+PAKKTVA+VGR GSGKSSIIP+MERFYDPTLGEVLLDGE
Sbjct: 408 VYFSYLSRPEIPILSGFYLTVPAKKTVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGE 467

Query: 181 NIKSLNLEWLRSQIGLVTYEPALLTSSIKDNISYGRANTTLIQIEEAAKVARLHAFINSL 360
           NIK++ LEWLRSQIGLVT EPALL+ SI+DNI+YGR +TT+ QIEEAAK+A  H FI+SL
Sbjct: 468 NIKNMKLEWLRSQIGLVTQEPALLSLSIRDNIAYGR-DTTMDQIEEAAKIAHAHTFISSL 526

Query: 361 DKGYETKVGRSGLLLSQEQKVKLSIARAVLMNPSILLLDDI 483
           DKGY+T+VGR+GL L++EQK+KLSIARAVL+NPSILLLD++
Sbjct: 527 DKGYDTQVGRAGLALTEEQKIKLSIARAVLLNPSILLLDEV 567



 Score =  165 bits (418), Expect = 3e-39
 Identities = 81/158 (51%), Positives = 114/158 (72%)
 Frame = +1

Query: 7    FSYPSRQEVPILSGFYLTIPAKKTVAIVGRTGSGKSSIIPIMERFYDPTLGEVLLDGENI 186
            F YPSR EV +LS F L +   +T+A+VG +GSGKS+II ++ERFYDP  G+VLLDG ++
Sbjct: 1157 FCYPSRPEVLVLSNFSLKVNGGQTIAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDL 1216

Query: 187  KSLNLEWLRSQIGLVTYEPALLTSSIKDNISYGRANTTLIQIEEAAKVARLHAFINSLDK 366
            K  NL WLRS +GLV  EP + +++I++NI Y R N +  +++EAA++A  H FI+SL  
Sbjct: 1217 KQYNLRWLRSHLGLVQQEPIIFSTTIRENIIYARHNASEAEMKEAARIANAHHFISSLPH 1276

Query: 367  GYETKVGRSGLLLSQEQKVKLSIARAVLMNPSILLLDD 480
            GY+T VG  G+ L+  QK +++IAR VL N  ILLLD+
Sbjct: 1277 GYDTHVGMRGVDLTPGQKQRIAIARVVLKNAPILLLDE 1314


Top