BLASTX nr result

ID: Bupleurum21_contig00032151 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00032151
         (442 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002324261.1| predicted protein [Populus trichocarpa] gi|2...   189   3e-46
ref|XP_002281904.2| PREDICTED: uncharacterized protein LOC100247...   181   6e-44
emb|CBI20936.3| unnamed protein product [Vitis vinifera]              181   6e-44
emb|CAN76132.1| hypothetical protein VITISV_022809 [Vitis vinifera]   181   6e-44
ref|XP_003545508.1| PREDICTED: uncharacterized protein LOC100779...   171   4e-41

>ref|XP_002324261.1| predicted protein [Populus trichocarpa] gi|222865695|gb|EEF02826.1|
           predicted protein [Populus trichocarpa]
          Length = 693

 Score =  189 bits (479), Expect = 3e-46
 Identities = 88/117 (75%), Positives = 101/117 (86%)
 Frame = -2

Query: 351 LKSEFSPKVKDIVAELVEKVDEGESLSIEKMIPITLDSIHFKGGTLMLLAYGDKEPREME 172
           +KS   PKV+DIVAELV+ VD  +S  IEKM+P++LDS+HFKGGTLMLLAYGD+EPREM 
Sbjct: 468 IKSGVGPKVEDIVAELVDGVDVVQSERIEKMLPVSLDSVHFKGGTLMLLAYGDREPREMG 527

Query: 171 NASGHVKFQNDYDRVHVQLSGNCKMWRSDATSEDGGWLSTDVFVDINEQKWHANLKI 1
           N +GH+KFQN Y RVHVQLSGNC+MWRSDA SEDGGWLS DVFVD+ EQ WHANLKI
Sbjct: 528 NVNGHLKFQNHYGRVHVQLSGNCRMWRSDAVSEDGGWLSADVFVDVVEQTWHANLKI 584


>ref|XP_002281904.2| PREDICTED: uncharacterized protein LOC100247424 [Vitis vinifera]
          Length = 2197

 Score =  181 bits (459), Expect = 6e-44
 Identities = 89/134 (66%), Positives = 102/134 (76%)
 Frame = -2

Query: 402 RGMGELWSYISAGPFQRLKSEFSPKVKDIVAELVEKVDEGESLSIEKMIPITLDSIHFKG 223
           + MG+L S   A   Q+LKS    KV+DIVA     +DE  +  IEKM P+TLDS+HFK 
Sbjct: 583 KNMGDLLSCFLAHSIQKLKSCIGQKVEDIVAG---HLDEVHTEGIEKMFPVTLDSVHFKS 639

Query: 222 GTLMLLAYGDKEPREMENASGHVKFQNDYDRVHVQLSGNCKMWRSDATSEDGGWLSTDVF 43
           GTL+LLAYGD EPREMEN +GH KFQN Y R+HVQLSGNCKMWRSD TSEDGGWLS DVF
Sbjct: 640 GTLLLLAYGDSEPREMENVNGHAKFQNHYGRMHVQLSGNCKMWRSDVTSEDGGWLSLDVF 699

Query: 42  VDINEQKWHANLKI 1
           VD  EQ+WHANLK+
Sbjct: 700 VDNVEQQWHANLKV 713


>emb|CBI20936.3| unnamed protein product [Vitis vinifera]
          Length = 2180

 Score =  181 bits (459), Expect = 6e-44
 Identities = 89/134 (66%), Positives = 102/134 (76%)
 Frame = -2

Query: 402 RGMGELWSYISAGPFQRLKSEFSPKVKDIVAELVEKVDEGESLSIEKMIPITLDSIHFKG 223
           + MG+L S   A   Q+LKS    KV+DIVA     +DE  +  IEKM P+TLDS+HFK 
Sbjct: 581 KNMGDLLSCFLAHSIQKLKSCIGQKVEDIVAG---HLDEVHTEGIEKMFPVTLDSVHFKS 637

Query: 222 GTLMLLAYGDKEPREMENASGHVKFQNDYDRVHVQLSGNCKMWRSDATSEDGGWLSTDVF 43
           GTL+LLAYGD EPREMEN +GH KFQN Y R+HVQLSGNCKMWRSD TSEDGGWLS DVF
Sbjct: 638 GTLLLLAYGDSEPREMENVNGHAKFQNHYGRMHVQLSGNCKMWRSDVTSEDGGWLSLDVF 697

Query: 42  VDINEQKWHANLKI 1
           VD  EQ+WHANLK+
Sbjct: 698 VDNVEQQWHANLKV 711


>emb|CAN76132.1| hypothetical protein VITISV_022809 [Vitis vinifera]
          Length = 2404

 Score =  181 bits (459), Expect = 6e-44
 Identities = 89/134 (66%), Positives = 102/134 (76%)
 Frame = -2

Query: 402 RGMGELWSYISAGPFQRLKSEFSPKVKDIVAELVEKVDEGESLSIEKMIPITLDSIHFKG 223
           + MG+L S   A   Q+LKS    KV+DIVA     +DE  +  IEKM P+TLDS+HFK 
Sbjct: 533 KNMGDLLSCFLAHSIQKLKSCIGQKVEDIVAG---HLDEVHTEGIEKMFPVTLDSVHFKS 589

Query: 222 GTLMLLAYGDKEPREMENASGHVKFQNDYDRVHVQLSGNCKMWRSDATSEDGGWLSTDVF 43
           GTL+LLAYGD EPREMEN +GH KFQN Y R+HVQLSGNCKMWRSD TSEDGGWLS DVF
Sbjct: 590 GTLLLLAYGDSEPREMENVNGHAKFQNHYGRMHVQLSGNCKMWRSDVTSEDGGWLSLDVF 649

Query: 42  VDINEQKWHANLKI 1
           VD  EQ+WHANLK+
Sbjct: 650 VDNVEQQWHANLKV 663


>ref|XP_003545508.1| PREDICTED: uncharacterized protein LOC100779257 [Glycine max]
          Length = 2196

 Score =  171 bits (434), Expect = 4e-41
 Identities = 83/134 (61%), Positives = 101/134 (75%)
 Frame = -2

Query: 402 RGMGELWSYISAGPFQRLKSEFSPKVKDIVAELVEKVDEGESLSIEKMIPITLDSIHFKG 223
           + + +L S+  +G  + LKS+   KV+DIV+E V+ VD  +S  I K +PITLDS+HF+G
Sbjct: 578 KNIEDLISHFLSGSIEMLKSDVGLKVEDIVSEHVDGVDFVQSEGITKTLPITLDSVHFRG 637

Query: 222 GTLMLLAYGDKEPREMENASGHVKFQNDYDRVHVQLSGNCKMWRSDATSEDGGWLSTDVF 43
            TLMLLAYGDKE REMEN +G+VKFQN Y R+HV LSGNC  WRSD  SEDGGWLS +VF
Sbjct: 638 ATLMLLAYGDKEVREMENVNGNVKFQNHYSRIHVDLSGNCNSWRSDIISEDGGWLSANVF 697

Query: 42  VDINEQKWHANLKI 1
           VD  EQ WHANLKI
Sbjct: 698 VDTIEQNWHANLKI 711


Top