BLASTX nr result

ID: Bupleurum21_contig00032134 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00032134
         (294 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN71221.1| hypothetical protein VITISV_043564 [Vitis vinifera]    88   8e-16
emb|CAN61713.1| hypothetical protein VITISV_034504 [Vitis vinifera]    88   8e-16
gb|AAD22283.1| putative retroelement pol polyprotein [Arabidopsi...    88   8e-16
emb|CAN79562.1| hypothetical protein VITISV_020822 [Vitis vinifera]    87   1e-15
emb|CAN78580.1| hypothetical protein VITISV_013552 [Vitis vinifera]    87   2e-15

>emb|CAN71221.1| hypothetical protein VITISV_043564 [Vitis vinifera]
          Length = 1145

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 40/94 (42%), Positives = 59/94 (62%)
 Frame = -1

Query: 294  SYRTTPRMSTNETPFKLCYGTEALIPVEVGSPSFRSVYFNEQNNQLGIKTNLDLLDEVRD 115
            +YRTTP+     TPF L YG +A+IP E+G P+ +     ++N  + +  +LD  DE R+
Sbjct: 1006 AYRTTPKRPIRNTPFALAYGVDAVIPTEIGLPTAQIAIQGQRNEDMELARHLDCADETRE 1065

Query: 114  KAVESMKAYKQKTVDYFSKKVRPRQYSEGDLVLR 13
             A   M AY+QK+  Y++KKVRPR + +G LV R
Sbjct: 1066 AASVRMAAYQQKSAAYYNKKVRPRVFKKGSLVFR 1099


>emb|CAN61713.1| hypothetical protein VITISV_034504 [Vitis vinifera]
          Length = 1027

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 41/94 (43%), Positives = 58/94 (61%)
 Frame = -1

Query: 294  SYRTTPRMSTNETPFKLCYGTEALIPVEVGSPSFRSVYFNEQNNQLGIKTNLDLLDEVRD 115
            +YRTTP   T  TPF L YG +A+IP E+G P+ R+    + N  + +  NLD  DEVR+
Sbjct: 877  AYRTTPGRPTGNTPFALAYGMDAIIPTEIGLPTIRTEAVKQDNASVEVGRNLDWADEVRE 936

Query: 114  KAVESMKAYKQKTVDYFSKKVRPRQYSEGDLVLR 13
             A   M  Y+Q+   ++++KVRPR +  G LVLR
Sbjct: 937  SAXIRMADYQQRAFAHYNRKVRPRSFKNGTLVLR 970


>gb|AAD22283.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1787

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 47/96 (48%), Positives = 64/96 (66%), Gaps = 2/96 (2%)
 Frame = -1

Query: 294  SYRTTPRMSTNETPFKLCYGTEALIPVEVGSPSF-RSVYFNEQN-NQLGIKTNLDLLDEV 121
            SYRTTPR ST+ TPF L YG EAL P E G P+  RS+  N+   N   +  NLD L+E 
Sbjct: 1635 SYRTTPRRSTDRTPFSLTYGMEALAPCEAGLPTVRRSMLINDPTLNDQMLLDNLDTLEEQ 1694

Query: 120  RDKAVESMKAYKQKTVDYFSKKVRPRQYSEGDLVLR 13
            RD+A+  ++ Y+Q    +++KKV+ R ++EGDLVLR
Sbjct: 1695 RDQALLRIQNYQQAAAKFYNKKVKNRLFAEGDLVLR 1730


>emb|CAN79562.1| hypothetical protein VITISV_020822 [Vitis vinifera]
          Length = 1027

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 41/94 (43%), Positives = 59/94 (62%)
 Frame = -1

Query: 294  SYRTTPRMSTNETPFKLCYGTEALIPVEVGSPSFRSVYFNEQNNQLGIKTNLDLLDEVRD 115
            +YRTTP   T  TPF L YG +A+IP E+G P+ R+   N+ +  + +  NLD  DEVR+
Sbjct: 877  AYRTTPGRPTGNTPFALAYGMDAVIPTEIGLPTIRTNAANQSDANMELGRNLDWADEVRE 936

Query: 114  KAVESMKAYKQKTVDYFSKKVRPRQYSEGDLVLR 13
             A   M  Y+Q+   ++++KVRPR +  G LVLR
Sbjct: 937  SAAIRMADYQQRASAHYNRKVRPRSFKNGTLVLR 970


>emb|CAN78580.1| hypothetical protein VITISV_013552 [Vitis vinifera]
          Length = 978

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 41/94 (43%), Positives = 59/94 (62%)
 Frame = -1

Query: 294  SYRTTPRMSTNETPFKLCYGTEALIPVEVGSPSFRSVYFNEQNNQLGIKTNLDLLDEVRD 115
            +YRTTP   T  TPF L YG +A+IP E+G P+ R+    + +  + +  NLD  DEVR+
Sbjct: 828  AYRTTPERPTGNTPFALAYGMDAVIPTEIGLPTIRTDAAKQSDANMELGRNLDWTDEVRE 887

Query: 114  KAVESMKAYKQKTVDYFSKKVRPRQYSEGDLVLR 13
             AV  M  Y+Q+   ++++KVRPR +  G LVLR
Sbjct: 888  SAVIRMADYQQRASAHYNRKVRPRAFKNGTLVLR 921


Top