BLASTX nr result

ID: Bupleurum21_contig00032120 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00032120
         (272 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002864911.1| hypothetical protein ARALYDRAFT_496675 [Arab...   147   1e-33
ref|NP_974992.1| transducin/WD40 domain-containing protein [Arab...   144   7e-33
ref|NP_974991.1| transducin/WD40 domain-containing protein [Arab...   144   7e-33
ref|NP_568990.1| transducin/WD40 domain-containing protein [Arab...   144   7e-33
ref|XP_002274967.1| PREDICTED: chromatin assembly factor 1 subun...   143   2e-32

>ref|XP_002864911.1| hypothetical protein ARALYDRAFT_496675 [Arabidopsis lyrata subsp.
           lyrata] gi|297310746|gb|EFH41170.1| hypothetical protein
           ARALYDRAFT_496675 [Arabidopsis lyrata subsp. lyrata]
          Length = 489

 Score =  147 bits (370), Expect = 1e-33
 Identities = 70/91 (76%), Positives = 78/91 (85%), Gaps = 1/91 (1%)
 Frame = -3

Query: 270 GSVDNSCIIWDMKKGSVHQILEAHCHYVQGVAWDPLAKYAASLSSDRSLRIYVNKP-TKT 94
           GSVDNSCIIWD+ KG+VHQIL+AHCHYVQGVAWDPLAKY ASLSSDR+ RIYVNKP TK+
Sbjct: 130 GSVDNSCIIWDVSKGTVHQILDAHCHYVQGVAWDPLAKYVASLSSDRTCRIYVNKPQTKS 189

Query: 93  KGTEKVNYVSQQVITKVDQQTVDGSKPAKSH 1
           KG EK+NYV Q VITK DQQ  D +K  K+H
Sbjct: 190 KGVEKLNYVCQHVITKADQQRGDETKTIKTH 220


>ref|NP_974992.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana]
           gi|332010545|gb|AED97928.1| transducin/WD40
           domain-containing protein [Arabidopsis thaliana]
          Length = 428

 Score =  144 bits (363), Expect = 7e-33
 Identities = 69/91 (75%), Positives = 76/91 (83%), Gaps = 1/91 (1%)
 Frame = -3

Query: 270 GSVDNSCIIWDMKKGSVHQILEAHCHYVQGVAWDPLAKYAASLSSDRSLRIYVNKP-TKT 94
           GSVDNSCIIWD+ KGSVHQIL+AHCHYVQGVAWDPLAKY ASLSSDR+ RIY NKP TK+
Sbjct: 71  GSVDNSCIIWDVNKGSVHQILDAHCHYVQGVAWDPLAKYVASLSSDRTCRIYANKPQTKS 130

Query: 93  KGTEKVNYVSQQVITKVDQQTVDGSKPAKSH 1
           KG EK+NYV Q VI K DQQ  D +K  K+H
Sbjct: 131 KGVEKMNYVCQHVIMKADQQRGDETKTIKTH 161


>ref|NP_974991.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana]
           gi|75337830|sp|Q9SXY1.1|FAS2_ARATH RecName:
           Full=Chromatin assembly factor 1 subunit FAS2;
           Short=CAF-1 subunit FAS2; AltName: Full=CAF-1 p60
           homolog; AltName: Full=Protein FASCIATA 2
           gi|4884488|dbj|BAA77766.1| FAS2 [Arabidopsis thaliana]
           gi|10178066|dbj|BAB11430.1| FAS2 [Arabidopsis thaliana]
           gi|332010547|gb|AED97930.1| transducin/WD40
           domain-containing protein [Arabidopsis thaliana]
          Length = 487

 Score =  144 bits (363), Expect = 7e-33
 Identities = 69/91 (75%), Positives = 76/91 (83%), Gaps = 1/91 (1%)
 Frame = -3

Query: 270 GSVDNSCIIWDMKKGSVHQILEAHCHYVQGVAWDPLAKYAASLSSDRSLRIYVNKP-TKT 94
           GSVDNSCIIWD+ KGSVHQIL+AHCHYVQGVAWDPLAKY ASLSSDR+ RIY NKP TK+
Sbjct: 130 GSVDNSCIIWDVNKGSVHQILDAHCHYVQGVAWDPLAKYVASLSSDRTCRIYANKPQTKS 189

Query: 93  KGTEKVNYVSQQVITKVDQQTVDGSKPAKSH 1
           KG EK+NYV Q VI K DQQ  D +K  K+H
Sbjct: 190 KGVEKMNYVCQHVIMKADQQRGDETKTIKTH 220


>ref|NP_568990.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana]
           gi|14030689|gb|AAK53019.1|AF375435_1 AT5g64630/MUB3_15
           [Arabidopsis thaliana] gi|18491113|gb|AAL69523.1|
           AT5g64630/MUB3_15 [Arabidopsis thaliana]
           gi|332010546|gb|AED97929.1| transducin/WD40
           domain-containing protein [Arabidopsis thaliana]
          Length = 397

 Score =  144 bits (363), Expect = 7e-33
 Identities = 69/91 (75%), Positives = 76/91 (83%), Gaps = 1/91 (1%)
 Frame = -3

Query: 270 GSVDNSCIIWDMKKGSVHQILEAHCHYVQGVAWDPLAKYAASLSSDRSLRIYVNKP-TKT 94
           GSVDNSCIIWD+ KGSVHQIL+AHCHYVQGVAWDPLAKY ASLSSDR+ RIY NKP TK+
Sbjct: 130 GSVDNSCIIWDVNKGSVHQILDAHCHYVQGVAWDPLAKYVASLSSDRTCRIYANKPQTKS 189

Query: 93  KGTEKVNYVSQQVITKVDQQTVDGSKPAKSH 1
           KG EK+NYV Q VI K DQQ  D +K  K+H
Sbjct: 190 KGVEKMNYVCQHVIMKADQQRGDETKTIKTH 220


>ref|XP_002274967.1| PREDICTED: chromatin assembly factor 1 subunit B [Vitis vinifera]
           gi|296088566|emb|CBI37557.3| unnamed protein product
           [Vitis vinifera]
          Length = 456

 Score =  143 bits (360), Expect = 2e-32
 Identities = 70/91 (76%), Positives = 75/91 (82%), Gaps = 1/91 (1%)
 Frame = -3

Query: 270 GSVDNSCIIWDMKKGSVHQILEAHCHYVQGVAWDPLAKYAASLSSDRSLRIYVNKP-TKT 94
           GSVDNSCIIWD+ KGSVHQIL+AH HYVQGVAWDP +KY ASLSSDRS RIYVNKP  KT
Sbjct: 130 GSVDNSCIIWDVNKGSVHQILDAHLHYVQGVAWDPQSKYVASLSSDRSCRIYVNKPQNKT 189

Query: 93  KGTEKVNYVSQQVITKVDQQTVDGSKPAKSH 1
           KG EK+NYV Q VITK +QQ  D SK  KSH
Sbjct: 190 KGIEKMNYVCQHVITKSEQQMTDDSKSVKSH 220


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