BLASTX nr result

ID: Bupleurum21_contig00032116 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00032116
         (522 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002322706.1| predicted protein [Populus trichocarpa] gi|2...    77   2e-12
emb|CBI16367.3| unnamed protein product [Vitis vinifera]               75   6e-12
ref|XP_002313340.1| predicted protein [Populus trichocarpa] gi|2...    75   6e-12
ref|XP_002285425.1| PREDICTED: uncharacterized protein LOC100257...    75   6e-12
emb|CAN73276.1| hypothetical protein VITISV_031232 [Vitis vinifera]    75   6e-12

>ref|XP_002322706.1| predicted protein [Populus trichocarpa] gi|222867336|gb|EEF04467.1|
           predicted protein [Populus trichocarpa]
          Length = 117

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 40/93 (43%), Positives = 52/93 (55%), Gaps = 6/93 (6%)
 Frame = +3

Query: 225 STSIINSNTGTNLEVNSNNG------CSTPKGKKFKIPRINKCPPAPMKRRXXXXXXXXX 386
           ST+  +S     + +N   G      CSTPK ++FKIP I  CPPAPMKRR         
Sbjct: 33  STTSTSSKESCTVNINDQEGDKDIVGCSTPKAQRFKIPEILSCPPAPMKRR--------- 83

Query: 387 XXXXXXXXKRNPIAFFSPPDLELFFFFASDDHL 485
                   K++PI FF+PPD+ELFFFFA  D++
Sbjct: 84  -ATTKCSSKKSPIVFFAPPDIELFFFFAFRDNI 115


>emb|CBI16367.3| unnamed protein product [Vitis vinifera]
          Length = 245

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 38/69 (55%), Positives = 44/69 (63%)
 Frame = +3

Query: 273 SNNGCSTPKGKKFKIPRINKCPPAPMKRRXXXXXXXXXXXXXXXXXKRNPIAFFSPPDLE 452
           SNNG STPK ++F+IP I  CPPAP KRR                 +R+PIAFF+PPDLE
Sbjct: 111 SNNGFSTPKAQRFRIPEILTCPPAPKKRR------------PNYSLRRSPIAFFAPPDLE 158

Query: 453 LFFFFASDD 479
           LFFFFA  D
Sbjct: 159 LFFFFALGD 167


>ref|XP_002313340.1| predicted protein [Populus trichocarpa] gi|222849748|gb|EEE87295.1|
           predicted protein [Populus trichocarpa]
          Length = 126

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 44/103 (42%), Positives = 56/103 (54%), Gaps = 4/103 (3%)
 Frame = +3

Query: 174 KQKKKISTDNQGVGENISTSIINSNTGTNLEVN----SNNGCSTPKGKKFKIPRINKCPP 341
           K  K  ST +Q    N STS  + +    L+V     S + CSTPK ++F+IP I  CPP
Sbjct: 31  KSIKGASTIDQDFPSNSSTSCDDCSRIDGLDVEGVDISTSACSTPKAERFRIPEIQTCPP 90

Query: 342 APMKRRXXXXXXXXXXXXXXXXXKRNPIAFFSPPDLELFFFFA 470
           AP K+R                 +R PIAFF+PPDLELFFF+A
Sbjct: 91  APRKQR----------MISICSLQRRPIAFFAPPDLELFFFYA 123


>ref|XP_002285425.1| PREDICTED: uncharacterized protein LOC100257066 [Vitis vinifera]
          Length = 110

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 38/69 (55%), Positives = 44/69 (63%)
 Frame = +3

Query: 273 SNNGCSTPKGKKFKIPRINKCPPAPMKRRXXXXXXXXXXXXXXXXXKRNPIAFFSPPDLE 452
           SNNG STPK ++F+IP I  CPPAP KRR                 +R+PIAFF+PPDLE
Sbjct: 51  SNNGFSTPKAQRFRIPEILTCPPAPKKRR------------PNYSLRRSPIAFFAPPDLE 98

Query: 453 LFFFFASDD 479
           LFFFFA  D
Sbjct: 99  LFFFFALGD 107


>emb|CAN73276.1| hypothetical protein VITISV_031232 [Vitis vinifera]
          Length = 110

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 38/69 (55%), Positives = 44/69 (63%)
 Frame = +3

Query: 273 SNNGCSTPKGKKFKIPRINKCPPAPMKRRXXXXXXXXXXXXXXXXXKRNPIAFFSPPDLE 452
           SNNG STPK ++F+IP I  CPPAP KRR                 +R+PIAFF+PPDLE
Sbjct: 51  SNNGFSTPKAQRFRIPEILTCPPAPKKRR------------PNYSLRRSPIAFFAPPDLE 98

Query: 453 LFFFFASDD 479
           LFFFFA  D
Sbjct: 99  LFFFFALGD 107


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