BLASTX nr result

ID: Bupleurum21_contig00032104 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00032104
         (563 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635054.1| PREDICTED: cysteine desulfurase 1, mitochond...    58   2e-15
emb|CAN71439.1| hypothetical protein VITISV_011331 [Vitis vinifera]    57   1e-14
ref|XP_002311007.1| predicted protein [Populus trichocarpa] gi|2...    59   2e-14
emb|CAN68617.1| hypothetical protein VITISV_000452 [Vitis vinifera]    59   2e-13
ref|XP_002520658.1| conserved hypothetical protein [Ricinus comm...    55   2e-12

>ref|XP_003635054.1| PREDICTED: cysteine desulfurase 1, mitochondrial [Vitis vinifera]
          Length = 865

 Score = 57.8 bits (138), Expect(2) = 2e-15
 Identities = 25/58 (43%), Positives = 35/58 (60%)
 Frame = +2

Query: 389 FFLQFYHREDLSWVYNGGPWSFDNAMLAVSKIPQGEEPLNVPLRSLEMWIQIHDLPKG 562
           F  QF+H  DL  V  GGPW+FDN +L +  + QG  P  +PL  +  WIQ++D+  G
Sbjct: 532 FLFQFFHIVDLKRVLEGGPWTFDNHLLILHHLKQGAIPTAIPLFHVLFWIQVYDILVG 589



 Score = 49.3 bits (116), Expect(2) = 2e-15
 Identities = 22/47 (46%), Positives = 32/47 (68%)
 Frame = +1

Query: 256 TYELCLVGRFLMEKSINTRAMTTKLVDVWKPAMGVNIKEIDSCIFLF 396
           +++LCL+GRFL ++ IN  AM   L  VW+   G+ IKEI+  +FLF
Sbjct: 488 SFDLCLIGRFLTDRMINFNAMKHCLASVWRLEKGICIKEINKQLFLF 534


>emb|CAN71439.1| hypothetical protein VITISV_011331 [Vitis vinifera]
          Length = 626

 Score = 57.4 bits (137), Expect(2) = 1e-14
 Identities = 25/58 (43%), Positives = 35/58 (60%)
 Frame = +2

Query: 389 FFLQFYHREDLSWVYNGGPWSFDNAMLAVSKIPQGEEPLNVPLRSLEMWIQIHDLPKG 562
           F  QF+H  DL  V  GGPW+FDN +L +  + QG  P  +PL  +  WIQ++D+  G
Sbjct: 75  FXFQFFHIVDLKRVLEGGPWTFDNHLLILHHLKQGAIPTAIPLFHVLFWIQVYDILVG 132



 Score = 47.4 bits (111), Expect(2) = 1e-14
 Identities = 21/47 (44%), Positives = 31/47 (65%)
 Frame = +1

Query: 256 TYELCLVGRFLMEKSINTRAMTTKLVDVWKPAMGVNIKEIDSCIFLF 396
           +++LCL+GRFL ++ IN  AM   L  VW+   G+ IKEI+  +F F
Sbjct: 31  SFDLCLIGRFLTDRMINFNAMKHCLASVWRLEKGICIKEINKQLFXF 77


>ref|XP_002311007.1| predicted protein [Populus trichocarpa] gi|222850827|gb|EEE88374.1|
           predicted protein [Populus trichocarpa]
          Length = 280

 Score = 58.5 bits (140), Expect(2) = 2e-14
 Identities = 20/58 (34%), Positives = 38/58 (65%)
 Frame = +2

Query: 389 FFLQFYHREDLSWVYNGGPWSFDNAMLAVSKIPQGEEPLNVPLRSLEMWIQIHDLPKG 562
           + +QF+H  D+  V  G PW+FDN +L + ++ +G+ P  +P+  ++ W+QI++L  G
Sbjct: 64  YLIQFFHSVDMKRVLEGAPWAFDNHLLLLHRLVEGDVPRQIPVNHVDFWVQIYELQVG 121



 Score = 45.4 bits (106), Expect(2) = 2e-14
 Identities = 20/55 (36%), Positives = 31/55 (56%)
 Frame = +1

Query: 247 IDMTYELCLVGRFLMEKSINTRAMTTKLVDVWKPAMGVNIKEIDSCIFLFAILPS 411
           I  +Y+LCL GRFL ++SIN  A   K+  +W+P  G+  +E+    +L     S
Sbjct: 17  IVQSYDLCLAGRFLTDRSINFNATRNKVARLWRPGRGMCTRELSDSKYLIQFFHS 71


>emb|CAN68617.1| hypothetical protein VITISV_000452 [Vitis vinifera]
          Length = 344

 Score = 59.3 bits (142), Expect(3) = 2e-13
 Identities = 25/58 (43%), Positives = 33/58 (56%)
 Frame = +2

Query: 389 FFLQFYHREDLSWVYNGGPWSFDNAMLAVSKIPQGEEPLNVPLRSLEMWIQIHDLPKG 562
           F  QF H  D+  +   GPW++DN  L   ++ QG+    V L  L MWIQ+HDLP G
Sbjct: 89  FLFQFGHEADIRRIQESGPWAYDNHPLIFERVAQGDNLDKVDLNELAMWIQLHDLPAG 146



 Score = 38.1 bits (87), Expect(3) = 2e-13
 Identities = 18/42 (42%), Positives = 26/42 (61%)
 Frame = +1

Query: 271 LVGRFLMEKSINTRAMTTKLVDVWKPAMGVNIKEIDSCIFLF 396
           LVGRFL E+ I    M+  +   W+P MG++I++I    FLF
Sbjct: 50  LVGRFLTERFIRLNEMSQVMAANWRPGMGISIQDIYPQRFLF 91



 Score = 23.1 bits (48), Expect(3) = 2e-13
 Identities = 12/44 (27%), Positives = 22/44 (50%)
 Frame = +3

Query: 156 QNLEEQLGDLNIDEEENGDFTFDDEVEEQVNRYDL*AMFSGKVL 287
           +N+  ++  + +D+EE      D   E+ V +YDL     G+ L
Sbjct: 12  ENITNKVATVALDDEEIEVEDTDFHEEQSVTKYDLRFALVGRFL 55


>ref|XP_002520658.1| conserved hypothetical protein [Ricinus communis]
           gi|223540043|gb|EEF41620.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 250

 Score = 55.5 bits (132), Expect(2) = 2e-12
 Identities = 22/58 (37%), Positives = 36/58 (62%)
 Frame = +2

Query: 389 FFLQFYHREDLSWVYNGGPWSFDNAMLAVSKIPQGEEPLNVPLRSLEMWIQIHDLPKG 562
           +  QF+H  D+  V NGGPW+F+N  + + ++ + E P  V L+  + WIQ++ LP G
Sbjct: 84  YLFQFFHEVDVKRVENGGPWTFNNYHILLHRLKEKENPHEVELKWTDFWIQVYRLPIG 141



 Score = 41.6 bits (96), Expect(2) = 2e-12
 Identities = 18/43 (41%), Positives = 27/43 (62%)
 Frame = +1

Query: 247 IDMTYELCLVGRFLMEKSINTRAMTTKLVDVWKPAMGVNIKEI 375
           +D  ++ CLV R L +K IN +AM   +  +W+P  GV IKE+
Sbjct: 31  LDEDFQWCLVSRVLADKMINFQAMRNTMAMLWRPLQGVCIKEL 73


Top