BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00032100
         (468 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276416.2| PREDICTED: putative pentatricopeptide repeat...   183   1e-44
emb|CBI30310.3| unnamed protein product [Vitis vinifera]              183   1e-44
ref|XP_002882733.1| pentatricopeptide repeat-containing protein ...   163   2e-38
ref|XP_002309422.1| predicted protein [Populus trichocarpa] gi|2...   163   2e-38
ref|XP_004156253.1| PREDICTED: putative pentatricopeptide repeat...   162   3e-38

>ref|XP_002276416.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g11460-like [Vitis vinifera]
          Length = 629

 Score =  183 bits (465), Expect = 1e-44
 Identities = 85/126 (67%), Positives = 103/126 (81%)
 Frame = -3

Query: 379 SPNALTFPFALEACAALHFPVAGQQIHAHVVRTGCLSEPFVQTALMSMYCKCSLTVNARK 200
           SPNA TFPFA ++CA+L  P+AG Q+H HV++TGC  EPFVQT+L+SMYCKCS   +ARK
Sbjct: 53  SPNAFTFPFAFKSCASLSLPLAGSQLHGHVIKTGCEPEPFVQTSLISMYCKCSTIASARK 112

Query: 199 VFDESSYAKTLTVCYNALIAGYTHNSEFSSAVLLFSQMRLLGVSVNSVTLLGLIPGCTVP 20
           VFDE+ +++ L VCYNALIAGY+ NS FS AVLLF QMR  GVSVN+VT+LGLIP C  P
Sbjct: 113 VFDENHHSRNLAVCYNALIAGYSLNSRFSDAVLLFRQMRKEGVSVNAVTMLGLIPVCAGP 172

Query: 19  LHLGFG 2
           +HLGFG
Sbjct: 173 IHLGFG 178



 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 40/124 (32%), Positives = 60/124 (48%)
 Frame = -3

Query: 379 SPNALTFPFALEACAALHFPVAGQQIHAHVVRTGCLSEPFVQTALMSMYCKCSLTVNARK 200
           S NA+T    +  CA       G  +HA  VR G   +  V   L++MY +C     ARK
Sbjct: 156 SVNAVTMLGLIPVCAGPIHLGFGTSLHACSVRFGLDGDLSVGNCLLTMYVRCGSVDFARK 215

Query: 199 VFDESSYAKTLTVCYNALIAGYTHNSEFSSAVLLFSQMRLLGVSVNSVTLLGLIPGCTVP 20
           +FD       +T  +NA+I+GY  N      + L+ +M   G+  + VTL+G++  C   
Sbjct: 216 LFDGMPEKGLIT--WNAMISGYAQNGLAGHVLDLYRKMEFTGIVPDPVTLVGVLSSCA-- 271

Query: 19  LHLG 8
            HLG
Sbjct: 272 -HLG 274



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 31/97 (31%), Positives = 52/97 (53%)
 Frame = -3

Query: 376 PNALTFPFALEACAALHFPVAGQQIHAHVVRTGCLSEPFVQTALMSMYCKCSLTVNARKV 197
           P+ +T    L +CA L    AG+++   +  +G    PF++ AL++MY +C   V AR +
Sbjct: 258 PDPVTLVGVLSSCAHLGAHAAGREVEQRIELSGFGFNPFLKNALINMYARCGNLVKARAI 317

Query: 196 FDESSYAKTLTVCYNALIAGYTHNSEFSSAVLLFSQM 86
           FD     +   + + A+IAGY  + +   AV LF +M
Sbjct: 318 FD--GMTEKNVISWTAIIAGYGMHGQGELAVQLFDEM 352


>emb|CBI30310.3| unnamed protein product [Vitis vinifera]
          Length = 543

 Score =  183 bits (465), Expect = 1e-44
 Identities = 85/126 (67%), Positives = 103/126 (81%)
 Frame = -3

Query: 379 SPNALTFPFALEACAALHFPVAGQQIHAHVVRTGCLSEPFVQTALMSMYCKCSLTVNARK 200
           SPNA TFPFA ++CA+L  P+AG Q+H HV++TGC  EPFVQT+L+SMYCKCS   +ARK
Sbjct: 53  SPNAFTFPFAFKSCASLSLPLAGSQLHGHVIKTGCEPEPFVQTSLISMYCKCSTIASARK 112

Query: 199 VFDESSYAKTLTVCYNALIAGYTHNSEFSSAVLLFSQMRLLGVSVNSVTLLGLIPGCTVP 20
           VFDE+ +++ L VCYNALIAGY+ NS FS AVLLF QMR  GVSVN+VT+LGLIP C  P
Sbjct: 113 VFDENHHSRNLAVCYNALIAGYSLNSRFSDAVLLFRQMRKEGVSVNAVTMLGLIPVCAGP 172

Query: 19  LHLGFG 2
           +HLGFG
Sbjct: 173 IHLGFG 178



 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 40/124 (32%), Positives = 60/124 (48%)
 Frame = -3

Query: 379 SPNALTFPFALEACAALHFPVAGQQIHAHVVRTGCLSEPFVQTALMSMYCKCSLTVNARK 200
           S NA+T    +  CA       G  +HA  VR G   +  V   L++MY +C     ARK
Sbjct: 156 SVNAVTMLGLIPVCAGPIHLGFGTSLHACSVRFGLDGDLSVGNCLLTMYVRCGSVDFARK 215

Query: 199 VFDESSYAKTLTVCYNALIAGYTHNSEFSSAVLLFSQMRLLGVSVNSVTLLGLIPGCTVP 20
           +FD       +T  +NA+I+GY  N      + L+ +M   G+  + VTL+G++  C   
Sbjct: 216 LFDGMPEKGLIT--WNAMISGYAQNGLAGHVLDLYRKMEFTGIVPDPVTLVGVLSSCA-- 271

Query: 19  LHLG 8
            HLG
Sbjct: 272 -HLG 274



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 31/97 (31%), Positives = 52/97 (53%)
 Frame = -3

Query: 376 PNALTFPFALEACAALHFPVAGQQIHAHVVRTGCLSEPFVQTALMSMYCKCSLTVNARKV 197
           P+ +T    L +CA L    AG+++   +  +G    PF++ AL++MY +C   V AR +
Sbjct: 258 PDPVTLVGVLSSCAHLGAHAAGREVEQRIELSGFGFNPFLKNALINMYARCGNLVKARAI 317

Query: 196 FDESSYAKTLTVCYNALIAGYTHNSEFSSAVLLFSQM 86
           FD     +   + + A+IAGY  + +   AV LF +M
Sbjct: 318 FD--GMTEKNVISWTAIIAGYGMHGQGELAVQLFDEM 352


>ref|XP_002882733.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297328573|gb|EFH58992.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 620

 Score =  163 bits (412), Expect = 2e-38
 Identities = 76/127 (59%), Positives = 100/127 (78%)
 Frame = -3

Query: 382 SSPNALTFPFALEACAALHFPVAGQQIHAHVVRTGCLSEPFVQTALMSMYCKCSLTVNAR 203
           SSP+A +FPF L++CA+L  PV+GQQ+H HV+R GC +EPFV TAL+SMYCKC L  +AR
Sbjct: 46  SSPDAFSFPFILKSCASLSLPVSGQQLHCHVIRGGCEAEPFVLTALISMYCKCGLVEDAR 105

Query: 202 KVFDESSYAKTLTVCYNALIAGYTHNSEFSSAVLLFSQMRLLGVSVNSVTLLGLIPGCTV 23
           KVF+E+ ++  L VCYNALI+GYT NS+ S A  +F +M+  GVSV+SVT+LGL+P CTV
Sbjct: 106 KVFEENPHSSQLGVCYNALISGYTANSKVSDAAFMFRRMKETGVSVDSVTILGLVPLCTV 165

Query: 22  PLHLGFG 2
           P +L  G
Sbjct: 166 PEYLWLG 172



 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 37/124 (29%), Positives = 62/124 (50%)
 Frame = -3

Query: 379 SPNALTFPFALEACAALHFPVAGQQIHAHVVRTGCLSEPFVQTALMSMYCKCSLTVNARK 200
           S +++T    +  C    +   G+ +H   V+ G  SE  V  + ++MY KC    + R+
Sbjct: 150 SVDSVTILGLVPLCTVPEYLWLGRSLHGECVKGGTYSEVAVLNSFITMYMKCGSVESGRR 209

Query: 199 VFDESSYAKTLTVCYNALIAGYTHNSEFSSAVLLFSQMRLLGVSVNSVTLLGLIPGCTVP 20
           +FDE      +T  +NA+I+GY+ N      + LF QM+  GV  +  TL+ ++  C   
Sbjct: 210 LFDEMPVKGLIT--WNAVISGYSQNGLAYDVLELFEQMKSSGVCPDPFTLVSVLSSCA-- 265

Query: 19  LHLG 8
            HLG
Sbjct: 266 -HLG 268


>ref|XP_002309422.1| predicted protein [Populus trichocarpa] gi|222855398|gb|EEE92945.1|
           predicted protein [Populus trichocarpa]
          Length = 582

 Score =  163 bits (412), Expect = 2e-38
 Identities = 74/127 (58%), Positives = 98/127 (77%)
 Frame = -3

Query: 382 SSPNALTFPFALEACAALHFPVAGQQIHAHVVRTGCLSEPFVQTALMSMYCKCSLTVNAR 203
           +SPNA TFPFA+++CAAL  P+ G+Q+H HV +TGCL EPFVQT+L+SMY KCSL  NAR
Sbjct: 6   ASPNAFTFPFAIKSCAALSLPITGKQLHCHVFKTGCLLEPFVQTSLISMYGKCSLIDNAR 65

Query: 202 KVFDESSYAKTLTVCYNALIAGYTHNSEFSSAVLLFSQMRLLGVSVNSVTLLGLIPGCTV 23
           K+FDE+  ++ LTVCYN+L++GY  NS     V+LF +MR LGV +N VT+LGL+  C +
Sbjct: 66  KLFDENPQSRKLTVCYNSLLSGYALNSRVKDVVVLFCEMRELGVEINGVTMLGLVQPCGI 125

Query: 22  PLHLGFG 2
           P +LG G
Sbjct: 126 PGNLGLG 132



 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 33/117 (28%), Positives = 55/117 (47%)
 Frame = -3

Query: 376 PNALTFPFALEACAALHFPVAGQQIHAHVVRTGCLSEPFVQTALMSMYCKCSLTVNARKV 197
           P+ LT    L +CA L     G+++   +   G  S PF+  AL++MY +C     AR +
Sbjct: 212 PDPLTLVGVLSSCAHLGALSVGKEVERKMEGFGFSSNPFLNNALVNMYARCGNLKKARDI 271

Query: 196 FDESSYAKTLTVCYNALIAGYTHNSEFSSAVLLFSQMRLLGVSVNSVTLLGLIPGCT 26
           FD         V + A+I GY  + +   AV LF +M   G+  +    + ++  C+
Sbjct: 272 FDGMPVKS--VVSWTAIIGGYGMHGQGEVAVGLFDEMIRGGIKPDGTAFVSVLSACS 326


>ref|XP_004156253.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g11460-like [Cucumis sativus]
          Length = 614

 Score =  162 bits (410), Expect = 3e-38
 Identities = 77/125 (61%), Positives = 94/125 (75%)
 Frame = -3

Query: 376 PNALTFPFALEACAALHFPVAGQQIHAHVVRTGCLSEPFVQTALMSMYCKCSLTVNARKV 197
           PNA TFPFAL++CAAL  P+ G Q H  + + GC+ EPFVQT L+SMYCK SL  NARKV
Sbjct: 38  PNAFTFPFALKSCAALSLPILGSQFHGQITKVGCVFEPFVQTGLISMYCKGSLVDNARKV 97

Query: 196 FDESSYAKTLTVCYNALIAGYTHNSEFSSAVLLFSQMRLLGVSVNSVTLLGLIPGCTVPL 17
           F+E+ +++ LTVCYNAL++GY  NS+ S AVLLF QM   GV VNSVTLLGLIP C  P+
Sbjct: 98  FEENFHSRKLTVCYNALVSGYVSNSKCSDAVLLFRQMNEEGVPVNSVTLLGLIPACVSPI 157

Query: 16  HLGFG 2
           +L  G
Sbjct: 158 NLELG 162



 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 32/115 (27%), Positives = 59/115 (51%)
 Frame = -3

Query: 373 NALTFPFALEACAALHFPVAGQQIHAHVVRTGCLSEPFVQTALMSMYCKCSLTVNARKVF 194
           N++T    + AC +      G  +H   ++ G  S+  V    ++MY KC     A+K+F
Sbjct: 142 NSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFITMYMKCGSVNYAQKLF 201

Query: 193 DESSYAKTLTVCYNALIAGYTHNSEFSSAVLLFSQMRLLGVSVNSVTLLGLIPGC 29
           DE      ++  +NA+++GY  N   ++ + L+  M + GV  + VTL+G++  C
Sbjct: 202 DEMPVKGLIS--WNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPVTLVGVLSSC 254



 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 32/117 (27%), Positives = 55/117 (47%)
 Frame = -3

Query: 376 PNALTFPFALEACAALHFPVAGQQIHAHVVRTGCLSEPFVQTALMSMYCKCSLTVNARKV 197
           P+ +T    L +CA L     G ++   +  +G  S PF+  AL++MY +C     A+ V
Sbjct: 242 PDPVTLVGVLSSCANLGAQSVGHEVEFKMQASGFTSNPFLNNALINMYARCGNLTKAQAV 301

Query: 196 FDESSYAKTLTVCYNALIAGYTHNSEFSSAVLLFSQMRLLGVSVNSVTLLGLIPGCT 26
           FD     +   V + A+I GY  +     AV LF +M   G+  +    + ++  C+
Sbjct: 302 FD--GMPERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACS 356