BLASTX nr result

ID: Bupleurum21_contig00032090 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00032090
         (483 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACB28472.1| polyprotein [Ananas comosus]                           240   1e-61
gb|AFJ66186.1| hypothetical protein 11M19.5 [Arabidopsis halleri]     239   2e-61
emb|CAE02919.3| OSJNBb0108J11.11 [Oryza sativa Japonica Group]        234   4e-60
gb|AAG51046.1|AC069473_8 gypsy/Ty-3 retroelement polyprotein; 69...   234   4e-60
gb|AAL68643.1|AF458767_1 polyprotein [Oryza sativa Japonica Group]    234   4e-60

>gb|ACB28472.1| polyprotein [Ananas comosus]
          Length = 953

 Score =  240 bits (612), Expect = 1e-61
 Identities = 108/160 (67%), Positives = 135/160 (84%)
 Frame = +2

Query: 2   DHRIPIIPGACPVNIRPYRYPLKQKDVIEQLIQEMLDRGIIQHSASPYASPVVLVGKKDG 181
           DH+IP+  G  P+N+RPYRYP  QK  IE+L+QEML +G+I  S SPY+SPVVLV KKDG
Sbjct: 218 DHKIPLKEGTNPINVRPYRYPAYQKTEIEKLVQEMLSQGVITPSNSPYSSPVVLVKKKDG 277

Query: 182 TWRLCIDYRALNKQTVKDKFPIPVIEELMDELSGAVVFSKLDLRAGYHQIRMYKDDVFKT 361
           +WRLCIDYR+LN  T+KDKFPIP+++EL+DELSGA +FS+LDLR+GYHQIRM+ DD+ KT
Sbjct: 278 SWRLCIDYRSLNDSTIKDKFPIPLVDELLDELSGAKLFSELDLRSGYHQIRMHADDISKT 337

Query: 362 AFKTHSGHYEFLVLPFGLTNAPAAFQRWMNSVFSPALRKY 481
           AF+TH GHYEFLV+PFGLTNAP+ FQ  MN +F P LR++
Sbjct: 338 AFRTHEGHYEFLVMPFGLTNAPSTFQGLMNHIFKPYLRRF 377


>gb|AFJ66186.1| hypothetical protein 11M19.5 [Arabidopsis halleri]
          Length = 1557

 Score =  239 bits (609), Expect = 2e-61
 Identities = 107/160 (66%), Positives = 136/160 (85%)
 Frame = +2

Query: 2    DHRIPIIPGACPVNIRPYRYPLKQKDVIEQLIQEMLDRGIIQHSASPYASPVVLVGKKDG 181
            DH+IP+  GA PV++RPYRY   QKD+I+++++EML +GIIQ+S+SPYASPVVLV KKDG
Sbjct: 675  DHQIPVEAGASPVSLRPYRYNSIQKDIIDRMVREMLSQGIIQNSSSPYASPVVLVKKKDG 734

Query: 182  TWRLCIDYRALNKQTVKDKFPIPVIEELMDELSGAVVFSKLDLRAGYHQIRMYKDDVFKT 361
            +WRLC+DYR +NKQT+KDK+PIP++E+L+DEL G+  FSKLDLRAG+HQIRM+  DV+KT
Sbjct: 735  SWRLCVDYRGVNKQTIKDKYPIPLLEDLLDELGGSTYFSKLDLRAGFHQIRMHPHDVYKT 794

Query: 362  AFKTHSGHYEFLVLPFGLTNAPAAFQRWMNSVFSPALRKY 481
            AFKTH+GHYE+LV+PFGLTN P  FQ  MN VF    RKY
Sbjct: 795  AFKTHAGHYEYLVMPFGLTNVPCTFQGLMNQVFRHIARKY 834


>emb|CAE02919.3| OSJNBb0108J11.11 [Oryza sativa Japonica Group]
          Length = 815

 Score =  234 bits (598), Expect = 4e-60
 Identities = 111/159 (69%), Positives = 132/159 (83%)
 Frame = +2

Query: 2   DHRIPIIPGACPVNIRPYRYPLKQKDVIEQLIQEMLDRGIIQHSASPYASPVVLVGKKDG 181
           DH IP+IPGA PVN+RPYRY   QKD IEQ ++EMLD+GIIQ S+SP++SPV+LV KKDG
Sbjct: 145 DHTIPLIPGAVPVNVRPYRYTPAQKDEIEQQVREMLDKGIIQPSSSPFSSPVLLVKKKDG 204

Query: 182 TWRLCIDYRALNKQTVKDKFPIPVIEELMDELSGAVVFSKLDLRAGYHQIRMYKDDVFKT 361
           TWR C+DYR LN  TVK+K+P+P+I+EL+DELS A  F+KLDLRAGYHQIRM   D  KT
Sbjct: 205 TWRFCVDYRHLNAITVKNKYPLPIIDELLDELSRAQWFTKLDLRAGYHQIRMKMSDEHKT 264

Query: 362 AFKTHSGHYEFLVLPFGLTNAPAAFQRWMNSVFSPALRK 478
           AFKTHSGHYEF V+PFGLT+APA FQ  MNS+ SP LR+
Sbjct: 265 AFKTHSGHYEFRVIPFGLTSAPATFQGGMNSILSPLLRR 303


>gb|AAG51046.1|AC069473_8 gypsy/Ty-3 retroelement polyprotein; 69905-74404 [Arabidopsis
            thaliana] gi|10998138|dbj|BAB03109.1| retroelement pol
            polyprotein [Arabidopsis thaliana]
          Length = 1499

 Score =  234 bits (598), Expect = 4e-60
 Identities = 107/160 (66%), Positives = 134/160 (83%)
 Frame = +2

Query: 2    DHRIPIIPGACPVNIRPYRYPLKQKDVIEQLIQEMLDRGIIQHSASPYASPVVLVGKKDG 181
            +H+I ++ G+ PVN RPYRY + QK+ I++L++++L  G +Q S+SPYASPVVLV KKDG
Sbjct: 590  NHKIKLLEGSNPVNQRPYRYSIHQKNEIDKLVEDLLTNGTVQASSSPYASPVVLVKKKDG 649

Query: 182  TWRLCIDYRALNKQTVKDKFPIPVIEELMDELSGAVVFSKLDLRAGYHQIRMYKDDVFKT 361
            TWRLC+DYR LN  TVKD FPIP+IE+LMDEL GAV+FSK+DLRAGYHQ+RM  DD+ KT
Sbjct: 650  TWRLCVDYRELNGMTVKDSFPIPLIEDLMDELGGAVIFSKIDLRAGYHQVRMDPDDIQKT 709

Query: 362  AFKTHSGHYEFLVLPFGLTNAPAAFQRWMNSVFSPALRKY 481
            AFKTHSGH+E+LV+PFGLTNAPA FQ  MN +F P LRK+
Sbjct: 710  AFKTHSGHFEYLVMPFGLTNAPATFQGLMNFIFKPFLRKF 749


>gb|AAL68643.1|AF458767_1 polyprotein [Oryza sativa Japonica Group]
          Length = 775

 Score =  234 bits (598), Expect = 4e-60
 Identities = 111/159 (69%), Positives = 132/159 (83%)
 Frame = +2

Query: 2   DHRIPIIPGACPVNIRPYRYPLKQKDVIEQLIQEMLDRGIIQHSASPYASPVVLVGKKDG 181
           DH IP+IPGA PVN+RPYRY   QKD IEQ ++EMLD+GIIQ S+SP++SPV+LV KKDG
Sbjct: 145 DHTIPLIPGAVPVNVRPYRYTPAQKDEIEQQVREMLDKGIIQPSSSPFSSPVLLVKKKDG 204

Query: 182 TWRLCIDYRALNKQTVKDKFPIPVIEELMDELSGAVVFSKLDLRAGYHQIRMYKDDVFKT 361
           TWR C+DYR LN  TVK+K+P+P+I+EL+DELS A  F+KLDLRAGYHQIRM   D  KT
Sbjct: 205 TWRFCVDYRHLNAITVKNKYPLPIIDELLDELSRAQWFTKLDLRAGYHQIRMKMSDEHKT 264

Query: 362 AFKTHSGHYEFLVLPFGLTNAPAAFQRWMNSVFSPALRK 478
           AFKTHSGHYEF V+PFGLT+APA FQ  MNS+ SP LR+
Sbjct: 265 AFKTHSGHYEFRVIPFGLTSAPATFQGGMNSILSPLLRR 303


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