BLASTX nr result

ID: Bupleurum21_contig00032063 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00032063
         (284 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520212.1| F-box and wd40 domain protein, putative [Ric...   156   1e-36
ref|XP_003631291.1| PREDICTED: uncharacterized WD repeat-contain...   154   5e-36
emb|CAN76269.1| hypothetical protein VITISV_004097 [Vitis vinifera]   154   9e-36
ref|XP_003517744.1| PREDICTED: uncharacterized WD repeat-contain...   149   2e-34
gb|ACB59206.1| transducin family protein [Brassica oleracea]          145   3e-33

>ref|XP_002520212.1| F-box and wd40 domain protein, putative [Ricinus communis]
           gi|223540704|gb|EEF42267.1| F-box and wd40 domain
           protein, putative [Ricinus communis]
          Length = 431

 Score =  156 bits (395), Expect = 1e-36
 Identities = 69/93 (74%), Positives = 82/93 (88%)
 Frame = +2

Query: 5   GIDDDTPYQKHKCIATLPTVNDRITRFFLAKNYVEIRRHKKSTWVHHVDTVSALALSKDG 184
           G +D+    K+ CIATLPT+NDR  RFF +KNYV++RRHKK TWVHHVDTVSALA+SKDG
Sbjct: 152 GSNDNNKQHKYNCIATLPTMNDRFLRFFSSKNYVQVRRHKKCTWVHHVDTVSALAVSKDG 211

Query: 185 SFIYSASWDQTFKVWRTSDFKCLESVWNAHDDA 283
           SF++SASWD+TFK+WRTSDF+CLESV NAHDDA
Sbjct: 212 SFLFSASWDRTFKIWRTSDFRCLESVANAHDDA 244


>ref|XP_003631291.1| PREDICTED: uncharacterized WD repeat-containing protein
           alr3466-like [Vitis vinifera]
          Length = 427

 Score =  154 bits (390), Expect = 5e-36
 Identities = 64/94 (68%), Positives = 83/94 (88%)
 Frame = +2

Query: 2   WGIDDDTPYQKHKCIATLPTVNDRITRFFLAKNYVEIRRHKKSTWVHHVDTVSALALSKD 181
           W +D+D+P+QK+KC+ATLPT++DR  + F A NYV++RRHKK TWVHHVDT+SALALS+D
Sbjct: 154 WKVDNDSPHQKYKCMATLPTLSDRALKLFSASNYVQVRRHKKCTWVHHVDTISALALSED 213

Query: 182 GSFIYSASWDQTFKVWRTSDFKCLESVWNAHDDA 283
           GS +YSASWD+TFK+W+T+DF+CLES   AHDDA
Sbjct: 214 GSLLYSASWDRTFKIWKTTDFRCLESAEKAHDDA 247


>emb|CAN76269.1| hypothetical protein VITISV_004097 [Vitis vinifera]
          Length = 507

 Score =  154 bits (388), Expect = 9e-36
 Identities = 64/94 (68%), Positives = 82/94 (87%)
 Frame = +2

Query: 2   WGIDDDTPYQKHKCIATLPTVNDRITRFFLAKNYVEIRRHKKSTWVHHVDTVSALALSKD 181
           W +D+D P+QK+KC+ATLPT++DR  + F A NYV++RRHKK TWVHHVDT+SALALS+D
Sbjct: 234 WKVDNDXPHQKYKCMATLPTLSDRALKLFSASNYVQVRRHKKCTWVHHVDTISALALSED 293

Query: 182 GSFIYSASWDQTFKVWRTSDFKCLESVWNAHDDA 283
           GS +YSASWD+TFK+W+T+DF+CLES   AHDDA
Sbjct: 294 GSLLYSASWDRTFKIWKTTDFRCLESAEKAHDDA 327


>ref|XP_003517744.1| PREDICTED: uncharacterized WD repeat-containing protein
           alr3466-like [Glycine max]
          Length = 433

 Score =  149 bits (377), Expect = 2e-34
 Identities = 66/83 (79%), Positives = 78/83 (93%)
 Frame = +2

Query: 35  HKCIATLPTVNDRITRFFLAKNYVEIRRHKKSTWVHHVDTVSALALSKDGSFIYSASWDQ 214
           +KC+ATLPT++DRI++ F +KNYVEIRRHKK TWVHHVDTVSALALS+DGS +YSASWD+
Sbjct: 167 YKCVATLPTLHDRISKLFSSKNYVEIRRHKKRTWVHHVDTVSALALSRDGSLLYSASWDR 226

Query: 215 TFKVWRTSDFKCLESVWNAHDDA 283
           TFK+WRTSDFKCLESV NAH+DA
Sbjct: 227 TFKIWRTSDFKCLESVKNAHEDA 249


>gb|ACB59206.1| transducin family protein [Brassica oleracea]
          Length = 410

 Score =  145 bits (366), Expect = 3e-33
 Identities = 65/94 (69%), Positives = 78/94 (82%)
 Frame = +2

Query: 2   WGIDDDTPYQKHKCIATLPTVNDRITRFFLAKNYVEIRRHKKSTWVHHVDTVSALALSKD 181
           W  +DD+   K+KC+ATLPT+NDR T  F  K+YVE+RRHKKSTWVHHVD VS+LALS D
Sbjct: 136 WKTNDDS--NKYKCVATLPTMNDRFTSLFSQKSYVEVRRHKKSTWVHHVDAVSSLALSLD 193

Query: 182 GSFIYSASWDQTFKVWRTSDFKCLESVWNAHDDA 283
           GS +YSASWD++FK+WR SDFKCLES+  AHDDA
Sbjct: 194 GSLLYSASWDRSFKIWRASDFKCLESIEKAHDDA 227


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