BLASTX nr result

ID: Bupleurum21_contig00032058 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00032058
         (481 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635054.1| PREDICTED: cysteine desulfurase 1, mitochond...   151   5e-35
emb|CAN71439.1| hypothetical protein VITISV_011331 [Vitis vinifera]   147   7e-34
ref|XP_003630747.1| hypothetical protein MTR_8g102880 [Medicago ...   140   1e-31
ref|XP_002311007.1| predicted protein [Populus trichocarpa] gi|2...   137   9e-31
emb|CAN77450.1| hypothetical protein VITISV_016971 [Vitis vinifera]   137   1e-30

>ref|XP_003635054.1| PREDICTED: cysteine desulfurase 1, mitochondrial [Vitis vinifera]
          Length = 865

 Score =  151 bits (382), Expect = 5e-35
 Identities = 68/145 (46%), Positives = 98/145 (67%)
 Frame = +1

Query: 4   TNKFELCLIGRFLTEKTINTRSMKIKMADIWKPAMGVNIKELETGIFLFQFYHKEDKAWV 183
           T  F+LCLIGRFLT++ IN  +MK  +A +W+   G+ IKE+   +FLFQF+H  D   V
Sbjct: 486 TQSFDLCLIGRFLTDRMINFNAMKHCLASVWRLEKGICIKEINKQLFLFQFFHIVDLKRV 545

Query: 184 MNGGPWTFDNAMLLIEEIPTGEEPLKVQLWFLNIWIQVYDLPNGFMSEAVGQQLGNFFGE 363
           + GGPWTFDN +L++  +  G  P  + L+ +  WIQVYD+  G MS  VG+QL NF G+
Sbjct: 546 LEGGPWTFDNHLLILHHLKQGAIPTAIPLFHVLFWIQVYDILVGSMSLNVGKQLDNFIGK 605

Query: 364 FISYDAKNNSSIWREYMRIKIRVDV 438
           F+ Y+  NN+ +WR +MRI++ +DV
Sbjct: 606 FVDYNINNNAGLWRNFMRIRVLLDV 630


>emb|CAN71439.1| hypothetical protein VITISV_011331 [Vitis vinifera]
          Length = 626

 Score =  147 bits (372), Expect = 7e-34
 Identities = 66/144 (45%), Positives = 96/144 (66%)
 Frame = +1

Query: 4   TNKFELCLIGRFLTEKTINTRSMKIKMADIWKPAMGVNIKELETGIFLFQFYHKEDKAWV 183
           T  F+LCLIGRFLT++ IN  +MK  +A +W+   G+ IKE+   +F FQF+H  D   V
Sbjct: 29  TXSFDLCLIGRFLTDRMINFNAMKHCLASVWRLEKGICIKEINKQLFXFQFFHIVDLKRV 88

Query: 184 MNGGPWTFDNAMLLIEEIPTGEEPLKVQLWFLNIWIQVYDLPNGFMSEAVGQQLGNFFGE 363
           + GGPWTFDN +L++  +  G  P  + L+ +  WIQVYD+  G MS  VG+QL NF G+
Sbjct: 89  LEGGPWTFDNHLLILHHLKQGAIPTAIPLFHVLFWIQVYDILVGSMSLNVGKQLDNFIGK 148

Query: 364 FISYDAKNNSSIWREYMRIKIRVD 435
           F+ Y+  NN+ +WR +MRI++ +D
Sbjct: 149 FVDYNINNNAGLWRNFMRIRVLLD 172


>ref|XP_003630747.1| hypothetical protein MTR_8g102880 [Medicago truncatula]
           gi|355524769|gb|AET05223.1| hypothetical protein
           MTR_8g102880 [Medicago truncatula]
          Length = 214

 Score =  140 bits (352), Expect = 1e-31
 Identities = 63/135 (46%), Positives = 87/135 (64%)
 Frame = +1

Query: 19  LCLIGRFLTEKTINTRSMKIKMADIWKPAMGVNIKELETGIFLFQFYHKEDKAWVMNGGP 198
           LCL+GRFL  + I  + MKI+M ++W+P  GV +KE +  +FLFQF+HK D   ++NGGP
Sbjct: 33  LCLVGRFLVNRPIRLKEMKIRMYEVWRPVKGVAVKEAQPRLFLFQFFHKLDMEEILNGGP 92

Query: 199 WTFDNAMLLIEEIPTGEEPLKVQLWFLNIWIQVYDLPNGFMSEAVGQQLGNFFGEFISYD 378
           WT+D+  L++E++  G                VY+LP G M E VG  LGN+ GEF++YD
Sbjct: 93  WTYDSHSLVLEKLRIG---------------VVYNLPTGMMKEKVGTGLGNYIGEFLTYD 137

Query: 379 AKNNSSIWREYMRIK 423
             NNSS W EYMR+K
Sbjct: 138 GNNNSSFWHEYMRLK 152


>ref|XP_002311007.1| predicted protein [Populus trichocarpa] gi|222850827|gb|EEE88374.1|
           predicted protein [Populus trichocarpa]
          Length = 280

 Score =  137 bits (345), Expect = 9e-31
 Identities = 57/141 (40%), Positives = 93/141 (65%)
 Frame = +1

Query: 13  FELCLIGRFLTEKTINTRSMKIKMADIWKPAMGVNIKELETGIFLFQFYHKEDKAWVMNG 192
           ++LCL GRFLT+++IN  + + K+A +W+P  G+  +EL    +L QF+H  D   V+ G
Sbjct: 21  YDLCLAGRFLTDRSINFNATRNKVARLWRPGRGMCTRELSDSKYLIQFFHSVDMKRVLEG 80

Query: 193 GPWTFDNAMLLIEEIPTGEEPLKVQLWFLNIWIQVYDLPNGFMSEAVGQQLGNFFGEFIS 372
            PW FDN +LL+  +  G+ P ++ +  ++ W+Q+Y+L  G+MS  +G+QLG+F G F+ 
Sbjct: 81  APWAFDNHLLLLHRLVEGDVPRQIPVNHVDFWVQIYELQVGYMSLVIGKQLGDFIGTFVD 140

Query: 373 YDAKNNSSIWREYMRIKIRVD 435
           YD  NN+   R YMRI++ +D
Sbjct: 141 YDTINNNGARRSYMRIRVTID 161


>emb|CAN77450.1| hypothetical protein VITISV_016971 [Vitis vinifera]
          Length = 652

 Score =  137 bits (344), Expect = 1e-30
 Identities = 58/123 (47%), Positives = 84/123 (68%)
 Frame = +1

Query: 70  MKIKMADIWKPAMGVNIKELETGIFLFQFYHKEDKAWVMNGGPWTFDNAMLLIEEIPTGE 249
           MK ++  +W+P  G+ IKE+   +FLFQF+H  D   V+ GGPWTFDN +L++  +  G 
Sbjct: 1   MKHRLTSVWRPGKGICIKEINKQLFLFQFFHIVDLKRVLEGGPWTFDNHLLILHHLKQGA 60

Query: 250 EPLKVQLWFLNIWIQVYDLPNGFMSEAVGQQLGNFFGEFISYDAKNNSSIWREYMRIKIR 429
            P  + L+ +  WIQVYD+P G MS  VG+QLGNF G+F+ YD  NN+ +WR +MRI++ 
Sbjct: 61  IPTAIPLFHVLFWIQVYDIPVGSMSLNVGKQLGNFIGKFVDYDINNNAGLWRNFMRIRVL 120

Query: 430 VDV 438
           +DV
Sbjct: 121 LDV 123


Top