BLASTX nr result

ID: Bupleurum21_contig00032048 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00032048
         (477 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002336671.1| predicted protein [Populus trichocarpa] gi|2...   167   8e-40
ref|XP_002322288.1| predicted protein [Populus trichocarpa] gi|2...   156   2e-36
ref|XP_002322287.1| predicted protein [Populus trichocarpa] gi|2...   156   2e-36
emb|CBI15722.3| unnamed protein product [Vitis vinifera]              154   7e-36
ref|XP_002280614.1| PREDICTED: uncharacterized protein LOC100257...   154   7e-36

>ref|XP_002336671.1| predicted protein [Populus trichocarpa] gi|222836495|gb|EEE74902.1|
           predicted protein [Populus trichocarpa]
          Length = 1060

 Score =  167 bits (423), Expect = 8e-40
 Identities = 78/159 (49%), Positives = 112/159 (70%), Gaps = 1/159 (0%)
 Frame = +3

Query: 3   NGGVSLTSLNDMSR-YGVKLFRATEDSYASWLISWNREFGNVTDYFFLPVTTQKAIRSLR 179
           +G VSL S+N+ ++ YG  L  + + S  SWLI WNREF  + ++FF+P TTQ+AI S  
Sbjct: 283 DGSVSLCSVNESAQPYGKTLCLSLQSSRVSWLIDWNREFRCMANHFFVPRTTQEAICSSS 342

Query: 180 NNQILFDWLSDPVNVKAVNVYSYADMLTQSVNNDRKLAVAYCHFIYHSFIKKFVSEQETS 359
           N +++  WL D V +KA++VY+YAD+    V+ DRKL +AY HF++HSF+  ++SE+E  
Sbjct: 343 NKELVLKWLVDLVKIKALSVYNYADLYGDQVSCDRKLVIAYAHFLHHSFLNDYLSEREVV 402

Query: 360 QLCSGMPLVDSYGRIVSQKRSVLLPANGSNWVGLIGSNP 476
            LC  MPL+DSYG ++  + +VL+PAN S WV LIGSNP
Sbjct: 403 SLCGKMPLIDSYGHVIKARNAVLVPANESKWVQLIGSNP 441


>ref|XP_002322288.1| predicted protein [Populus trichocarpa] gi|222869284|gb|EEF06415.1|
            predicted protein [Populus trichocarpa]
          Length = 1356

 Score =  156 bits (394), Expect = 2e-36
 Identities = 74/159 (46%), Positives = 107/159 (67%), Gaps = 1/159 (0%)
 Frame = +3

Query: 3    NGGVSLTSLNDMSRYGVK-LFRATEDSYASWLISWNREFGNVTDYFFLPVTTQKAIRSLR 179
            +G VSL S+N+ ++   K L  +   S+ SWLI WNREF  + ++FF+P TTQ+AI S  
Sbjct: 549  DGSVSLCSVNESAQRNSKTLCLSRYSSHVSWLIDWNREFQCMANHFFVPRTTQEAISSSS 608

Query: 180  NNQILFDWLSDPVNVKAVNVYSYADMLTQSVNNDRKLAVAYCHFIYHSFIKKFVSEQETS 359
            N +++ +WL D V +  ++VY YA +    V+ D+KL +AY HF+YHSF  +++SE+E  
Sbjct: 609  NKELVLEWLEDLVEITTLSVYKYAVLYGDQVSCDQKLVIAYAHFLYHSFQNEYLSEREVV 668

Query: 360  QLCSGMPLVDSYGRIVSQKRSVLLPANGSNWVGLIGSNP 476
             LC  MPLVDSYG ++  + +VL+PA  S WV LIGSNP
Sbjct: 669  SLCGKMPLVDSYGHVIKARNAVLVPATESKWVQLIGSNP 707


>ref|XP_002322287.1| predicted protein [Populus trichocarpa] gi|222869283|gb|EEF06414.1|
            predicted protein [Populus trichocarpa]
          Length = 1467

 Score =  156 bits (394), Expect = 2e-36
 Identities = 74/159 (46%), Positives = 107/159 (67%), Gaps = 1/159 (0%)
 Frame = +3

Query: 3    NGGVSLTSLNDMSRYGVK-LFRATEDSYASWLISWNREFGNVTDYFFLPVTTQKAIRSLR 179
            +G VSL S+N+ ++   K L  + + S  SWLI WNREF  + ++FF+P TTQ+AI S  
Sbjct: 549  DGSVSLCSVNESAQRNSKTLCLSLQSSRVSWLIDWNREFQCMANHFFVPRTTQEAISSSS 608

Query: 180  NNQILFDWLSDPVNVKAVNVYSYADMLTQSVNNDRKLAVAYCHFIYHSFIKKFVSEQETS 359
            N +++ +WL D V +  ++VY YA +    V+ D+KL +AY HF+YHSF  +++SE+E  
Sbjct: 609  NKELVLEWLEDLVEITTLSVYKYAVLYGDQVSCDQKLVIAYAHFLYHSFQNEYLSEREVV 668

Query: 360  QLCSGMPLVDSYGRIVSQKRSVLLPANGSNWVGLIGSNP 476
             LC  MPLVDSYG ++  + +VL+PA  S WV LIGSNP
Sbjct: 669  SLCGKMPLVDSYGHVIKARNAVLVPATESKWVQLIGSNP 707


>emb|CBI15722.3| unnamed protein product [Vitis vinifera]
          Length = 875

 Score =  154 bits (389), Expect = 7e-36
 Identities = 71/160 (44%), Positives = 106/160 (66%), Gaps = 2/160 (1%)
 Frame = +3

Query: 3    NGGVSLTSLNDMSRY--GVKLFRATEDSYASWLISWNREFGNVTDYFFLPVTTQKAIRSL 176
            +G V L   +++S +  G  +  + E  + SWLI WNREF  VTD +F+P +TQ+AI+  
Sbjct: 548  DGNVVLCPTSNVSMWNGGSMICMSRESQHISWLIDWNREFRRVTDRYFMPKSTQEAIKVF 607

Query: 177  RNNQILFDWLSDPVNVKAVNVYSYADMLTQSVNNDRKLAVAYCHFIYHSFIKKFVSEQET 356
               + L +WL + V V+ V+VY +A +L  S   DR+LA+AY HF+YHS  K ++ + + 
Sbjct: 608  SKRETLLEWLQNQVKVRVVSVYDFAVILYNSFKGDRQLAIAYVHFLYHSLSKSYLPKGDV 667

Query: 357  SQLCSGMPLVDSYGRIVSQKRSVLLPANGSNWVGLIGSNP 476
              LC  MPLVD+YG + +Q++ VL+PANGS WVGL+G+NP
Sbjct: 668  DNLCRIMPLVDNYGHVSTQRKGVLVPANGSKWVGLMGANP 707


>ref|XP_002280614.1| PREDICTED: uncharacterized protein LOC100257713 [Vitis vinifera]
          Length = 1725

 Score =  154 bits (389), Expect = 7e-36
 Identities = 71/160 (44%), Positives = 113/160 (70%), Gaps = 2/160 (1%)
 Frame = +3

Query: 3    NGGVSLTSLNDMS-RYGVKLF-RATEDSYASWLISWNREFGNVTDYFFLPVTTQKAIRSL 176
            +G V+L ++++++ R G  +   + E  + SW+I WNREFG +TD +F+P +TQ AI S 
Sbjct: 548  DGRVALCAISNVTMRDGESMICMSHEPRHISWMIDWNREFGFMTDRYFMPRSTQAAIMSF 607

Query: 177  RNNQILFDWLSDPVNVKAVNVYSYADMLTQSVNNDRKLAVAYCHFIYHSFIKKFVSEQET 356
               + L +WL   V V+ V +Y++A +L  S+N+DR+LA+AY HF+YHSF K ++ +++ 
Sbjct: 608  FRRETLLEWLKIQVKVRVVGMYNFAVILYNSLNDDRQLAIAYAHFLYHSFSKSYLPKEKV 667

Query: 357  SQLCSGMPLVDSYGRIVSQKRSVLLPANGSNWVGLIGSNP 476
              LC  MPLVD+YG ++ +++ VL+PANGS WVGL+G+NP
Sbjct: 668  DYLCGIMPLVDNYGHVMRRRKGVLVPANGSKWVGLMGANP 707


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