BLASTX nr result

ID: Bupleurum21_contig00032028 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00032028
         (465 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002534014.1| conserved hypothetical protein [Ricinus comm...   222   2e-56
emb|CBI31405.3| unnamed protein product [Vitis vinifera]              218   3e-55
ref|NP_181454.1| major facilitator protein [Arabidopsis thaliana...   218   3e-55
ref|XP_002881636.1| predicted protein [Arabidopsis lyrata subsp....   217   9e-55
ref|XP_002862889.1| nodulin family protein [Arabidopsis lyrata s...   217   9e-55

>ref|XP_002534014.1| conserved hypothetical protein [Ricinus communis]
           gi|223525979|gb|EEF28367.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 544

 Score =  222 bits (566), Expect = 2e-56
 Identities = 113/140 (80%), Positives = 121/140 (86%), Gaps = 5/140 (3%)
 Frame = -2

Query: 407 MVVAGANTN-----PTMKILFLQVLTGRWFMVFASNLIMSVAGATYMFSLYSGDIKSTLG 243
           MVVAG           MK L +QV+TGRWFMVFAS LIMS AGATYMFSLYSGDIKS LG
Sbjct: 1   MVVAGPGGGGGGGLADMKNLTIQVITGRWFMVFASFLIMSAAGATYMFSLYSGDIKSALG 60

Query: 242 YDQSTLNLLSFFKDLGANVGVLSGLINEVTPPYVVLSIGAVLNFFGYFMIWLAVTRRIST 63
           YDQ+TLNLLSFFKDLGANVGVLSGLINEVTPP+VVLS+GAVLNFFGYFMIWLAVTR+I+ 
Sbjct: 61  YDQTTLNLLSFFKDLGANVGVLSGLINEVTPPWVVLSMGAVLNFFGYFMIWLAVTRKITG 120

Query: 62  PQIWHMCLYICIGANSQSFA 3
             +WHMCLYICIGANSQSFA
Sbjct: 121 VHVWHMCLYICIGANSQSFA 140


>emb|CBI31405.3| unnamed protein product [Vitis vinifera]
          Length = 567

 Score =  218 bits (556), Expect = 3e-55
 Identities = 106/137 (77%), Positives = 120/137 (87%)
 Frame = -2

Query: 413 LAMVVAGANTNPTMKILFLQVLTGRWFMVFASNLIMSVAGATYMFSLYSGDIKSTLGYDQ 234
           +A + AG      MK L +QV+TGRWF+VFAS LIMS AGATYMF LYSG IKS LGYDQ
Sbjct: 3   VAGIAAGGGGWADMKSLSVQVITGRWFVVFASFLIMSAAGATYMFGLYSGTIKSALGYDQ 62

Query: 233 STLNLLSFFKDLGANVGVLSGLINEVTPPYVVLSIGAVLNFFGYFMIWLAVTRRISTPQI 54
           +TLNLLSFFKDLGANVGVLSGLINEVTPP+VVLS+GA LNFFGYFMIWLAV+++I+ PQ+
Sbjct: 63  TTLNLLSFFKDLGANVGVLSGLINEVTPPWVVLSMGAALNFFGYFMIWLAVSQKIAKPQV 122

Query: 53  WHMCLYICIGANSQSFA 3
           WHMCLYICIGANSQ+FA
Sbjct: 123 WHMCLYICIGANSQAFA 139


>ref|NP_181454.1| major facilitator protein [Arabidopsis thaliana]
           gi|16930479|gb|AAL31925.1|AF419593_1 At2g39210/T16B24.15
           [Arabidopsis thaliana] gi|3402684|gb|AAC28987.1|
           nodulin-like protein [Arabidopsis thaliana]
           gi|330254552|gb|AEC09646.1| major facilitator protein
           [Arabidopsis thaliana]
          Length = 601

 Score =  218 bits (556), Expect = 3e-55
 Identities = 102/133 (76%), Positives = 116/133 (87%)
 Frame = -2

Query: 401 VAGANTNPTMKILFLQVLTGRWFMVFASNLIMSVAGATYMFSLYSGDIKSTLGYDQSTLN 222
           +  A+   +MK L +Q+LTGRWFM F S LIMS AGATYMF +YSGDIK TLGYDQ+TLN
Sbjct: 1   MVAASPGGSMKSLTIQILTGRWFMFFGSLLIMSTAGATYMFGIYSGDIKETLGYDQTTLN 60

Query: 221 LLSFFKDLGANVGVLSGLINEVTPPYVVLSIGAVLNFFGYFMIWLAVTRRISTPQIWHMC 42
           LLSFFKDLGANVGVL+GL+NEVTPP+ +L IGA+LNFFGYFMIWLAVT RIS PQ+WHMC
Sbjct: 61  LLSFFKDLGANVGVLAGLLNEVTPPWFILLIGAILNFFGYFMIWLAVTERISKPQVWHMC 120

Query: 41  LYICIGANSQSFA 3
           LYIC+GANSQSFA
Sbjct: 121 LYICVGANSQSFA 133


>ref|XP_002881636.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297327475|gb|EFH57895.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 576

 Score =  217 bits (552), Expect = 9e-55
 Identities = 101/133 (75%), Positives = 115/133 (86%)
 Frame = -2

Query: 401 VAGANTNPTMKILFLQVLTGRWFMVFASNLIMSVAGATYMFSLYSGDIKSTLGYDQSTLN 222
           +  A+   +MK L +Q+LTGRWFM F S LIMS AGATYMF +YSGDIK TLGYDQ+TLN
Sbjct: 1   MVAASPGGSMKSLTIQILTGRWFMFFGSLLIMSTAGATYMFGIYSGDIKKTLGYDQTTLN 60

Query: 221 LLSFFKDLGANVGVLSGLINEVTPPYVVLSIGAVLNFFGYFMIWLAVTRRISTPQIWHMC 42
           LLSFFKDLGANVGVL+GL+NEVTPP+ +L IG +LNFFGYFMIWLAVT RIS PQ+WHMC
Sbjct: 61  LLSFFKDLGANVGVLAGLLNEVTPPWFILLIGGILNFFGYFMIWLAVTERISKPQVWHMC 120

Query: 41  LYICIGANSQSFA 3
           LYIC+GANSQSFA
Sbjct: 121 LYICVGANSQSFA 133


>ref|XP_002862889.1| nodulin family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297308654|gb|EFH39148.1| nodulin family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 556

 Score =  217 bits (552), Expect = 9e-55
 Identities = 101/133 (75%), Positives = 115/133 (86%)
 Frame = -2

Query: 401 VAGANTNPTMKILFLQVLTGRWFMVFASNLIMSVAGATYMFSLYSGDIKSTLGYDQSTLN 222
           +  A+   +MK L +Q+LTGRWFM F S LIMS AGATYMF +YSGDIK TLGYDQ+TLN
Sbjct: 1   MVAASPGGSMKSLTIQILTGRWFMFFGSLLIMSTAGATYMFGIYSGDIKKTLGYDQTTLN 60

Query: 221 LLSFFKDLGANVGVLSGLINEVTPPYVVLSIGAVLNFFGYFMIWLAVTRRISTPQIWHMC 42
           LLSFFKDLGANVGVL+GL+NEVTPP+ +L IG +LNFFGYFMIWLAVT RIS PQ+WHMC
Sbjct: 61  LLSFFKDLGANVGVLAGLLNEVTPPWFILLIGGILNFFGYFMIWLAVTERISKPQVWHMC 120

Query: 41  LYICIGANSQSFA 3
           LYIC+GANSQSFA
Sbjct: 121 LYICVGANSQSFA 133


Top