BLASTX nr result

ID: Bupleurum21_contig00032014 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00032014
         (358 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA95229.1| retrotransposon protein, putative, Ty3-gypsy subc...   162   3e-38
gb|AAT07561.1| putative polyprotein [Oryza sativa Japonica Group...   160   8e-38
emb|CAH67397.1| H0115B09.9 [Oryza sativa Indica Group]                160   1e-37
emb|CAD41263.1| OSJNBb0103I08.2 [Oryza sativa Japonica Group] gi...   160   1e-37
ref|NP_001068285.2| Os11g0617500 [Oryza sativa Japonica Group] g...   154   9e-36

>gb|ABA95229.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1980

 Score =  162 bits (410), Expect = 3e-38
 Identities = 78/120 (65%), Positives = 96/120 (80%), Gaps = 1/120 (0%)
 Frame = -2

Query: 357  IGRNMECYVDDMIVKSNDK-DHGKDLRECFETLRQHSMRVNPSKCTFGVRSGKFLGYMVS 181
            +GRN+E YVDD++VKS     HGKDL+E FE LR+ S+++NP KC FGVR+GK LG++VS
Sbjct: 1133 LGRNVEAYVDDIVVKSKQAFTHGKDLQETFENLRKCSVKLNPEKCVFGVRAGKLLGFLVS 1192

Query: 180  QRGIEANPEKIQAILDMEPPKTKREVQRLTGRLAALRRFISRGAEKALPFFDTLRGVKNF 1
            +RGIEANP+KI AI  MEPPK  REVQRLTGR+A+L RF+S+ AEK LPFF TLRG   F
Sbjct: 1193 KRGIEANPDKIAAIHQMEPPKNTREVQRLTGRMASLSRFLSKSAEKGLPFFKTLRGANTF 1252


>gb|AAT07561.1| putative polyprotein [Oryza sativa Japonica Group]
           gi|46981311|gb|AAT07629.1| putative polyprotein [Oryza
           sativa Japonica Group]
          Length = 1459

 Score =  160 bits (406), Expect = 8e-38
 Identities = 77/120 (64%), Positives = 96/120 (80%), Gaps = 1/120 (0%)
 Frame = -2

Query: 357 IGRNMECYVDDMIVKSNDK-DHGKDLRECFETLRQHSMRVNPSKCTFGVRSGKFLGYMVS 181
           +GRN+E YVDD++VKS     HGKDL+E FE LR+ S+++NP KC FGVR GK LG++VS
Sbjct: 611 LGRNVEAYVDDIVVKSKKAFTHGKDLQETFENLRKFSVKLNPEKCMFGVRVGKLLGFLVS 670

Query: 180 QRGIEANPEKIQAILDMEPPKTKREVQRLTGRLAALRRFISRGAEKALPFFDTLRGVKNF 1
           +RGIEANP+KI AI  MEPPK  RE+QRLTGR+A+L RF+S+ AE+ LPFF TLR V NF
Sbjct: 671 KRGIEANPDKIAAIQQMEPPKNTREMQRLTGRMASLSRFLSKSAERGLPFFKTLRAVNNF 730


>emb|CAH67397.1| H0115B09.9 [Oryza sativa Indica Group]
          Length = 943

 Score =  160 bits (404), Expect = 1e-37
 Identities = 75/120 (62%), Positives = 97/120 (80%), Gaps = 1/120 (0%)
 Frame = -2

Query: 357 IGRNMECYVDDMIVKSNDK-DHGKDLRECFETLRQHSMRVNPSKCTFGVRSGKFLGYMVS 181
           +GRN+E YVDD++VKS     HGKDL+E FE LR++S+++NP KC FGV +GK LG++VS
Sbjct: 139 LGRNVEAYVDDIVVKSKQAFSHGKDLQETFENLRKYSVKLNPEKCVFGVGAGKLLGFLVS 198

Query: 180 QRGIEANPEKIQAILDMEPPKTKREVQRLTGRLAALRRFISRGAEKALPFFDTLRGVKNF 1
           +RGIEANP+KI AI  M+PPK  RE+QRLTGR+A+L RF+S+ AEK LPFF TLRG  +F
Sbjct: 199 KRGIEANPDKIAAIHQMQPPKNTREMQRLTGRMASLSRFLSKSAEKGLPFFKTLRGANSF 258


>emb|CAD41263.1| OSJNBb0103I08.2 [Oryza sativa Japonica Group]
           gi|38344987|emb|CAE02793.2| OSJNBa0011L07.17 [Oryza
           sativa Japonica Group]
          Length = 943

 Score =  160 bits (404), Expect = 1e-37
 Identities = 75/120 (62%), Positives = 97/120 (80%), Gaps = 1/120 (0%)
 Frame = -2

Query: 357 IGRNMECYVDDMIVKSNDK-DHGKDLRECFETLRQHSMRVNPSKCTFGVRSGKFLGYMVS 181
           +GRN+E YVDD++VKS     HGKDL+E FE LR++S+++NP KC FGV +GK LG++VS
Sbjct: 139 LGRNVEAYVDDIVVKSKQAFSHGKDLQETFENLRKYSVKLNPEKCVFGVGAGKLLGFLVS 198

Query: 180 QRGIEANPEKIQAILDMEPPKTKREVQRLTGRLAALRRFISRGAEKALPFFDTLRGVKNF 1
           +RGIEANP+KI AI  M+PPK  RE+QRLTGR+A+L RF+S+ AEK LPFF TLRG  +F
Sbjct: 199 KRGIEANPDKIAAIHQMQPPKNTREMQRLTGRMASLSRFLSKSAEKGLPFFKTLRGANSF 258


>ref|NP_001068285.2| Os11g0617500 [Oryza sativa Japonica Group]
           gi|255680267|dbj|BAF28648.2| Os11g0617500, partial
           [Oryza sativa Japonica Group]
          Length = 627

 Score =  154 bits (388), Expect = 9e-36
 Identities = 73/120 (60%), Positives = 93/120 (77%), Gaps = 1/120 (0%)
 Frame = -2

Query: 357 IGRNMECYVDDMIVKSNDK-DHGKDLRECFETLRQHSMRVNPSKCTFGVRSGKFLGYMVS 181
           +GRN+E YVDD++VKS    DH  DL+E F+ LR    ++NP KC FGVR+GK LG++VS
Sbjct: 208 LGRNVEAYVDDVVVKSRKAFDHASDLQETFDNLRAAGTKLNPEKCVFGVRAGKLLGFLVS 267

Query: 180 QRGIEANPEKIQAILDMEPPKTKREVQRLTGRLAALRRFISRGAEKALPFFDTLRGVKNF 1
           +RGIEANPEKI AI  M+PP + REVQ+L GR+AAL RF+S+ AE+ LPFF TLRGV+ F
Sbjct: 268 ERGIEANPEKIDAIQQMKPPLSVREVQKLAGRIAALNRFLSKAAERGLPFFKTLRGVEKF 327


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