BLASTX nr result

ID: Bupleurum21_contig00031975 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00031975
         (537 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAC05653.1| OJ1005_B10.22 [Oryza sativa Japonica Group]           132   2e-29
gb|EAZ12157.1| hypothetical protein OsJ_02038 [Oryza sativa Japo...   130   9e-29
gb|ADN33754.1| retrotransposon protein [Cucumis melo subsp. melo]     124   1e-26
emb|CAN65842.1| hypothetical protein VITISV_027369 [Vitis vinifera]   123   2e-26
gb|ADN34114.1| retrotransposon protein [Cucumis melo subsp. melo]     121   6e-26

>dbj|BAC05653.1| OJ1005_B10.22 [Oryza sativa Japonica Group]
          Length = 305

 Score =  132 bits (333), Expect = 2e-29
 Identities = 69/145 (47%), Positives = 92/145 (63%), Gaps = 13/145 (8%)
 Frame = -2

Query: 536 NCEGFLTPFRGQRYHLSVWKTGAQPTSAEEYFNMKHSQARNVIERSFGLLKMRWGILRNT 357
           N +GFL P+RGQRYHL  +     P SAEEYFNM+H+ ARN++ERSFG LK RW ILR+ 
Sbjct: 161 NADGFLAPYRGQRYHLGRFTARNPPRSAEEYFNMRHASARNIVERSFGRLKGRWAILRSP 220

Query: 356 TWYSRKAVGRIILACALMHNFIRTHMTSDPIEHLIEYNIEEDSRENSIGIME-------- 201
           +++  K   RII+ACAL+HN I   M+SDP E   + + +ED  E  + I+E        
Sbjct: 221 SYFPIKTQCRIIMACALLHNLILQKMSSDPFE---DEDEDEDEDEIPLDILEGELAEPEF 277

Query: 200 -----TSNTWTNFRKDLAKQMYDAH 141
                TS+ WTNFR  LA  MY+++
Sbjct: 278 ISAISTSDDWTNFRNTLAHGMYNSY 302


>gb|EAZ12157.1| hypothetical protein OsJ_02038 [Oryza sativa Japonica Group]
          Length = 598

 Score =  130 bits (328), Expect = 9e-29
 Identities = 69/144 (47%), Positives = 90/144 (62%), Gaps = 13/144 (9%)
 Frame = -2

Query: 536 NCEGFLTPFRGQRYHLSVWKTGAQPTSAEEYFNMKHSQARNVIERSFGLLKMRWGILRNT 357
           N +GFL P+RGQRYHL  +     P SAEEYFNM+H+ ARN++ERSFG LK RW ILR+ 
Sbjct: 143 NADGFLAPYRGQRYHLGRFTARNPPRSAEEYFNMRHASARNIVERSFGRLKGRWAILRSP 202

Query: 356 TWYSRKAVGRIILACALMHNFIRTHMTSDPIEHLIEYNIEEDSRENSIGIME-------- 201
           +++  K   RII+ACAL+HN I   M+SDP E   + + +ED  E  + I+E        
Sbjct: 203 SYFPIKTQCRIIMACALLHNLILQKMSSDPFE---DEDEDEDEDEIPLDILEGELAEPEF 259

Query: 200 -----TSNTWTNFRKDLAKQMYDA 144
                TS+ WTNFR  LA  +Y A
Sbjct: 260 ISAISTSDDWTNFRNTLAHGIYGA 283


>gb|ADN33754.1| retrotransposon protein [Cucumis melo subsp. melo]
          Length = 623

 Score =  124 bits (310), Expect = 1e-26
 Identities = 67/136 (49%), Positives = 85/136 (62%), Gaps = 7/136 (5%)
 Frame = -2

Query: 536 NCEGFLTPFRGQRYHLSVWKTGAQ-PTSAEEYFNMKHSQARNVIERSFGLLKMRWGILRN 360
           N EGFL P++GQRYHL  W+  A  PT+A+EYFNMKHS ARNVIER+FG+LK RW ILR 
Sbjct: 197 NAEGFLAPYKGQRYHLQEWRGAANAPTNAKEYFNMKHSSARNVIERAFGVLKGRWTILRG 256

Query: 359 TTWYSRKAVGRIILACALMHNFIRTHMTSDPIEHLIEYNIEEDS------RENSIGIMET 198
            ++Y  +   R ILAC L+HN I   MT     + +E   E DS          I  +ET
Sbjct: 257 KSYYPLQVQCRTILACTLLHNLINREMT---YCNDVEDEDEGDSTYATTTASEDIQYIET 313

Query: 197 SNTWTNFRKDLAKQMY 150
           +N W+ +R DLA  M+
Sbjct: 314 TNEWSQWRDDLATSMF 329


>emb|CAN65842.1| hypothetical protein VITISV_027369 [Vitis vinifera]
          Length = 579

 Score =  123 bits (308), Expect = 2e-26
 Identities = 59/106 (55%), Positives = 74/106 (69%), Gaps = 7/106 (6%)
 Frame = -2

Query: 536 NCEGFLTPFRGQRYHLSVWKTGAQPTSAEEYFNMKHSQARNVIERSFGLLKMRWGILRNT 357
           N +GFL P+RGQRYHL+ W+ G  PT+ EE+FNMKHS ARNVIER FGLLK+RW ILR+ 
Sbjct: 256 NGKGFLAPYRGQRYHLNDWREGHMPTTHEEFFNMKHSAARNVIERCFGLLKLRWAILRSP 315

Query: 356 TWYSRKAVGRIILACALMHNFIRTHMTSDPIE-------HLIEYNI 240
            +Y  K   +IILAC L+HN I+  M  DP+E       H + YN+
Sbjct: 316 CFYPIKTQCKIILACCLIHNLIKREMXVDPLEQELDVQDHQVLYNL 361


>gb|ADN34114.1| retrotransposon protein [Cucumis melo subsp. melo]
          Length = 657

 Score =  121 bits (304), Expect = 6e-26
 Identities = 64/141 (45%), Positives = 91/141 (64%), Gaps = 3/141 (2%)
 Frame = -2

Query: 536 NCEGFLTPFRGQRYHLSVWKTGAQ-PTSAEEYFNMKHSQARNVIERSFGLLKMRWGILRN 360
           N EGFL P+RGQRYHL  W+     P++++E+FNMKH  ARNVIER+FG+LK RW ILR 
Sbjct: 225 NAEGFLAPYRGQRYHLQEWRGPENAPSTSKEFFNMKHYSARNVIERAFGVLKGRWAILRG 284

Query: 359 TTWYSRKAVGRIILACALMHNFIRTHMTSDPIEHLIEY--NIEEDSRENSIGIMETSNTW 186
            ++Y  +   R ILAC L+HN I   MT+  IE  I+   +    +  + I  +ETSN W
Sbjct: 285 KSYYPVEVQCRTILACCLLHNLINREMTNFDIEDNIDEVDSTHATTAADDIHYIETSNEW 344

Query: 185 TNFRKDLAKQMYDAHLETRLP 123
           + +R +LA+++  +   +RLP
Sbjct: 345 SQWRDNLAEEIMTS--SSRLP 363


Top