BLASTX nr result

ID: Bupleurum21_contig00031960 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00031960
         (332 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN73732.1| hypothetical protein VITISV_022576 [Vitis vinifera]    86   2e-15
emb|CBI16901.3| unnamed protein product [Vitis vinifera]               80   2e-13
gb|AFK40640.1| unknown [Medicago truncatula]                           77   2e-12
ref|XP_002530814.1| conserved hypothetical protein [Ricinus comm...    76   2e-12
ref|XP_002539968.1| conserved hypothetical protein [Ricinus comm...    76   3e-12

>emb|CAN73732.1| hypothetical protein VITISV_022576 [Vitis vinifera]
          Length = 101

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 45/77 (58%), Positives = 54/77 (70%), Gaps = 2/77 (2%)
 Frame = -2

Query: 235 WNSPIPWLFGGIALMLGLILVALFILVCSYHRRRQSPPSTGDKPP--LKSSADVLQMVSV 62
           WNSP P+LFGG AL+LGLI+VAL IL CS+ +R  SP    DKPP  + +  D L     
Sbjct: 15  WNSPFPYLFGGFALILGLIVVALIILSCSHKKRTSSPDHVKDKPPKTICTEPDTLPR--- 71

Query: 61  PVVVIMAGDENPTYVAT 11
            V+VIMAGDENPTY+AT
Sbjct: 72  -VIVIMAGDENPTYLAT 87


>emb|CBI16901.3| unnamed protein product [Vitis vinifera]
          Length = 119

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 43/77 (55%), Positives = 54/77 (70%), Gaps = 2/77 (2%)
 Frame = -2

Query: 235 WNSPIPWLFGGIALMLGLILVALFILVCSYHRRRQSPPSTGDKP--PLKSSADVLQMVSV 62
           WNS +P+LFGG+AL++GLI+VAL IL CS+ +R  SP    DKP   + +  D L     
Sbjct: 15  WNSLLPYLFGGLALIIGLIVVALIILSCSHKKRTPSPDHDKDKPAKTICTEPDTLPR--- 71

Query: 61  PVVVIMAGDENPTYVAT 11
            VVVIMAGDENPTY+AT
Sbjct: 72  -VVVIMAGDENPTYLAT 87


>gb|AFK40640.1| unknown [Medicago truncatula]
          Length = 135

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 47/96 (48%), Positives = 63/96 (65%), Gaps = 7/96 (7%)
 Frame = -2

Query: 280 NTLSSH----LKTNHYSVGWNSPIPWLFGGIALMLGLILVALFILVCSYHRRRQSPPSTG 113
           NTLSS      +TN   + W SPIP+LFGG+A+ML LI VAL ILVCSY +R  S  S+ 
Sbjct: 5   NTLSSSSTTTTQTNEIKI-WQSPIPYLFGGLAIMLILISVALVILVCSYKKRGSSSQSSN 63

Query: 112 DKPPLKS--SADVLQMVSVP-VVVIMAGDENPTYVA 14
               +K   S ++ ++ S P V+VIMAG++ PTY+A
Sbjct: 64  SDEEMKQVMSKNIEKINSEPEVLVIMAGEDKPTYIA 99


>ref|XP_002530814.1| conserved hypothetical protein [Ricinus communis]
           gi|223529635|gb|EEF31582.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 115

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 41/78 (52%), Positives = 53/78 (67%), Gaps = 4/78 (5%)
 Frame = -2

Query: 235 WNSPIPWLFGGIALMLGLILVALFILVCSYHRRRQSPPSTGD----KPPLKSSADVLQMV 68
           W+SP+P+LFGG+ALMLG+I VAL IL CSY R+  S  S GD    KP  K +   +   
Sbjct: 16  WSSPMPYLFGGLALMLGVIAVALIILACSY-RKSLSDESRGDGHEEKPGAKQAELTVDSD 74

Query: 67  SVPVVVIMAGDENPTYVA 14
              +VVIMAGD+NPT++A
Sbjct: 75  EPKIVVIMAGDDNPTFLA 92


>ref|XP_002539968.1| conserved hypothetical protein [Ricinus communis]
           gi|223500659|gb|EEF22415.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 118

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 44/85 (51%), Positives = 52/85 (61%), Gaps = 11/85 (12%)
 Frame = -2

Query: 235 WNSPIPWLFGGIALMLGLILVALFILVCSYHRRRQSPPSTGDKPPLKSSAD--------- 83
           WNSP+P+LFGG+ALMLGLI +AL IL CSY   + S PS    P    +A+         
Sbjct: 22  WNSPVPYLFGGLALMLGLIAMALMILACSY---KNSSPSNNSSPRDHQAAEEKSRHDHKR 78

Query: 82  -VLQMVSVP-VVVIMAGDENPTYVA 14
             LQM   P +VVIMAGD NPTY A
Sbjct: 79  AELQMEMEPKIVVIMAGDHNPTYFA 103


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