BLASTX nr result
ID: Bupleurum21_contig00031949
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00031949
(637 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAR13317.1| gag-pol polyprotein [Phaseolus vulgaris] 191 8e-47
dbj|BAD66751.1| orf764 [Beta vulgaris subsp. vulgaris] 190 2e-46
ref|NP_063998.1| orf764 gene product (mitochondrion) [Beta vulga... 190 2e-46
emb|CAH66336.1| OSIGBa0097I24.4 [Oryza sativa Indica Group] 182 3e-44
emb|CAD40289.2| OSJNBb0062H02.6 [Oryza sativa Japonica Group] 182 3e-44
>gb|AAR13317.1| gag-pol polyprotein [Phaseolus vulgaris]
Length = 1859
Score = 191 bits (486), Expect = 8e-47
Identities = 100/206 (48%), Positives = 134/206 (65%)
Frame = +2
Query: 2 RPVYYVSQILKDAATRDPNIEKCALALIMASRKLRHYFQGREIRVVTNIPLKKILHKPDL 181
RPVY+VS++L DA TR +EK A AL++ +R++R YFQ ++ V TN P+ KIL KPDL
Sbjct: 1222 RPVYFVSRVLHDAETRYQMVEKVAFALVITARRMRMYFQNHKVIVRTNYPIMKILTKPDL 1281
Query: 182 SGRMANWAMELSQFQIEYVPRTAIKAQALADFIVECTFPEESTGGSPLRSEEPFATWILY 361
+GRM WA+ELS+F IEY PR AIK+QALADF E T P +E W LY
Sbjct: 1282 AGRMIGWAVELSEFHIEYQPRGAIKSQALADFTAELT---------PYLTERT-PRWTLY 1331
Query: 362 VDGSSTADRSGAGIILSSPDGFQIKQALRFAFKATNNQAEYEXXXXXXXXXXHLQVQNIS 541
VDGSS + SGAG++L P ++QA++F FK +NNQAEYE L+V NI+
Sbjct: 1332 VDGSSNSRSSGAGVVLEGPGEIVVEQAMKFEFKTSNNQAEYEAIIAGLHLAIELEVTNIT 1391
Query: 542 VHSDSQLVVRQIQGEYMAKDPIMMRY 619
SDS+LVV Q+ GEY ++ ++ +Y
Sbjct: 1392 CKSDSRLVVGQLTGEYEVRETLLQQY 1417
>dbj|BAD66751.1| orf764 [Beta vulgaris subsp. vulgaris]
Length = 764
Score = 190 bits (483), Expect = 2e-46
Identities = 100/205 (48%), Positives = 137/205 (66%)
Frame = +2
Query: 5 PVYYVSQILKDAATRDPNIEKCALALIMASRKLRHYFQGREIRVVTNIPLKKILHKPDLS 184
P+Y+VS +L +A R P +EK +LA+++A+RKLR YF I+V++N PL+K L K D S
Sbjct: 91 PIYFVSHVLNEAEQRYPLLEKMSLAVMIAARKLRPYFDAHTIQVLSNHPLEKALQKLDTS 150
Query: 185 GRMANWAMELSQFQIEYVPRTAIKAQALADFIVECTFPEESTGGSPLRSEEPFATWILYV 364
GR+ WA+ELS+F++EY PRTAIKAQALADFIVE ++ EE EEP W L V
Sbjct: 151 GRLLRWAVELSEFEVEYKPRTAIKAQALADFIVEASYEEE---------EEPVGVWKLAV 201
Query: 365 DGSSTADRSGAGIILSSPDGFQIKQALRFAFKATNNQAEYEXXXXXXXXXXHLQVQNISV 544
DGS+ SGAGII++SP+G + A++ FKA+NN+AEYE + I +
Sbjct: 202 DGSAAQTGSGAGIIMTSPEGNVFEYAIK--FKASNNEAEYEAAIAGIKMCMAADAKKIRL 259
Query: 545 HSDSQLVVRQIQGEYMAKDPIMMRY 619
+DSQLV QI+GEY A++P M +Y
Sbjct: 260 QTDSQLVASQIRGEYEAREPAMQKY 284
>ref|NP_063998.1| orf764 gene product (mitochondrion) [Beta vulgaris subsp. vulgaris]
gi|323435157|ref|YP_004222375.1| hypothetical protein
BevumaM_p142 [Beta vulgaris subsp. maritima]
gi|346683249|ref|YP_004842181.1| hypothetical protein
BemaM_p137 [Beta macrocarpa] gi|9049300|dbj|BAA99310.1|
orf764 [Beta vulgaris subsp. vulgaris]
gi|317905608|emb|CBJ14014.1| hypothetical protein [Beta
vulgaris subsp. maritima] gi|319439890|emb|CBJ17590.1|
hypothetical protein [Beta vulgaris subsp. maritima]
gi|320148045|emb|CBJ20708.1| hypothetical protein [Beta
vulgaris subsp. maritima] gi|345500167|emb|CBX24986.1|
hypothetical protein [Beta macrocarpa]
gi|384977907|emb|CBL54131.1| hypothetical protein
(mitochondrion) [Beta vulgaris subsp. maritima]
Length = 764
Score = 190 bits (483), Expect = 2e-46
Identities = 100/205 (48%), Positives = 137/205 (66%)
Frame = +2
Query: 5 PVYYVSQILKDAATRDPNIEKCALALIMASRKLRHYFQGREIRVVTNIPLKKILHKPDLS 184
P+Y+VS +L +A R P +EK +LA+++A+RKLR YF I+V++N PL+K L K D S
Sbjct: 91 PIYFVSHVLNEAEQRYPLLEKMSLAVMIAARKLRPYFDAHTIQVLSNHPLEKALQKLDTS 150
Query: 185 GRMANWAMELSQFQIEYVPRTAIKAQALADFIVECTFPEESTGGSPLRSEEPFATWILYV 364
GR+ WA+ELS+F++EY PRTAIKAQALADFIVE ++ EE EEP W L V
Sbjct: 151 GRLLRWAVELSEFEVEYKPRTAIKAQALADFIVEASYEEE---------EEPVGVWKLAV 201
Query: 365 DGSSTADRSGAGIILSSPDGFQIKQALRFAFKATNNQAEYEXXXXXXXXXXHLQVQNISV 544
DGS+ SGAGII++SP+G + A++ FKA+NN+AEYE + I +
Sbjct: 202 DGSAAQTGSGAGIIMTSPEGNVFEYAIK--FKASNNEAEYEAAIAGIKMCMAADAKKIRL 259
Query: 545 HSDSQLVVRQIQGEYMAKDPIMMRY 619
+DSQLV QI+GEY A++P M +Y
Sbjct: 260 QTDSQLVASQIRGEYEAREPAMQKY 284
>emb|CAH66336.1| OSIGBa0097I24.4 [Oryza sativa Indica Group]
Length = 2027
Score = 182 bits (463), Expect = 3e-44
Identities = 97/211 (45%), Positives = 131/211 (62%), Gaps = 5/211 (2%)
Frame = +2
Query: 2 RPVYYVSQILKDAATRDPNIEKCALALIMASRKLRHYFQGREIRVVTNIPLKKILHKPDL 181
RPVY+VS+ L+DA TR P +K A++MASRKLRHYFQ + VVT+ PL +ILH +
Sbjct: 1316 RPVYFVSEALRDAKTRYPQAQKMLYAILMASRKLRHYFQAHRVTVVTSYPLGQILHNREG 1375
Query: 182 SGRMANWAMELSQFQIEYVPRTAIKAQALADFIVECTFPEESTGGSPLRSEEP-----FA 346
+GR+ WA+ELS+F + + PR AIK+QALADF+ ECT P T P S +P A
Sbjct: 1376 TGRVVKWAIELSEFDLHFEPRHAIKSQALADFVAECT-PAPETVSIPEASTDPSQLPHTA 1434
Query: 347 TWILYVDGSSTADRSGAGIILSSPDGFQIKQALRFAFKATNNQAEYEXXXXXXXXXXHLQ 526
W++ DGS + +GAG+ L+SP+G ++ +R F+ATNN AEYE L
Sbjct: 1435 HWVMQFDGSLSLQGAGAGVTLTSPNGDVLRYLVRLDFRATNNMAEYEGLLAGLRVAAGLG 1494
Query: 527 VQNISVHSDSQLVVRQIQGEYMAKDPIMMRY 619
++ + V DSQLVV Q+ EY DP M Y
Sbjct: 1495 IRRLLVLGDSQLVVNQVCKEYRCSDPQMDAY 1525
>emb|CAD40289.2| OSJNBb0062H02.6 [Oryza sativa Japonica Group]
Length = 2001
Score = 182 bits (463), Expect = 3e-44
Identities = 97/211 (45%), Positives = 131/211 (62%), Gaps = 5/211 (2%)
Frame = +2
Query: 2 RPVYYVSQILKDAATRDPNIEKCALALIMASRKLRHYFQGREIRVVTNIPLKKILHKPDL 181
RPVY+VS+ L+DA TR P +K A++MASRKLRHYFQ + VVT+ PL +ILH +
Sbjct: 1316 RPVYFVSEALRDAKTRYPQAQKMLYAILMASRKLRHYFQAHRVTVVTSYPLGQILHNREG 1375
Query: 182 SGRMANWAMELSQFQIEYVPRTAIKAQALADFIVECTFPEESTGGSPLRSEEP-----FA 346
+GR+ WA+ELS+F + + PR AIK+QALADF+ ECT P T P S +P A
Sbjct: 1376 TGRVVKWAIELSEFDLHFEPRHAIKSQALADFVAECT-PAPETVSIPEASTDPSQLPHTA 1434
Query: 347 TWILYVDGSSTADRSGAGIILSSPDGFQIKQALRFAFKATNNQAEYEXXXXXXXXXXHLQ 526
W++ DGS + +GAG+ L+SP+G ++ +R F+ATNN AEYE L
Sbjct: 1435 HWVMQFDGSLSLQGAGAGVTLTSPNGDVLRYLVRLDFRATNNMAEYEGLLAGLRVAAGLG 1494
Query: 527 VQNISVHSDSQLVVRQIQGEYMAKDPIMMRY 619
++ + V DSQLVV Q+ EY DP M Y
Sbjct: 1495 IRRLLVLGDSQLVVNQVCKEYRCSDPQMDAY 1525