BLASTX nr result

ID: Bupleurum21_contig00031918 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00031918
         (403 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34752.3| unnamed protein product [Vitis vinifera]              102   2e-20
emb|CAN60407.1| hypothetical protein VITISV_008798 [Vitis vinifera]   100   1e-19
ref|XP_002298068.1| predicted protein [Populus trichocarpa] gi|2...    98   8e-19
ref|XP_004143994.1| PREDICTED: uncharacterized protein LOC101219...    96   2e-18
ref|XP_002304465.1| predicted protein [Populus trichocarpa] gi|2...    96   3e-18

>emb|CBI34752.3| unnamed protein product [Vitis vinifera]
          Length = 273

 Score =  102 bits (255), Expect = 2e-20
 Identities = 63/139 (45%), Positives = 86/139 (61%), Gaps = 21/139 (15%)
 Frame = -1

Query: 403 DDFSSCSSNGFRSFPRRQCCTTTVRFL--------DLAKKK---QNHQIPAPSKSSLSML 257
           DD SSCSSNGF+SFPRR CC TTVR+L        D  K K   +  +  A + +++S L
Sbjct: 27  DDMSSCSSNGFKSFPRRHCC-TTVRYLVEKDFKAKDSTKAKRLLRKSRSKAAASTTISAL 85

Query: 256 KRASTAVLNAVKHLPFASAAV-------KPRRAILPRSISKRLFKRSFFWRKS---DRKE 107
           +RAS AV+NAVK LPF+S          + R+ ILPRS+S++L KR  FW+++   +  E
Sbjct: 86  QRASEAVINAVKLLPFSSVKAPSFSVKNRSRKGILPRSLSRKLLKRK-FWKRTAVEEEIE 144

Query: 106 IARWKSFHTVADIKSEPSA 50
           I RWKSFH   + K + S+
Sbjct: 145 IERWKSFHDFLEEKQKSSS 163


>emb|CAN60407.1| hypothetical protein VITISV_008798 [Vitis vinifera]
          Length = 520

 Score =  100 bits (249), Expect = 1e-19
 Identities = 62/138 (44%), Positives = 84/138 (60%), Gaps = 21/138 (15%)
 Frame = -1

Query: 403 DDFSSCSSNGFRSFPRRQCCTTTVRFL---DLAKKK--------QNHQIPAPSKSSLSML 257
           DD SSCSSNGF+SFPRR CC TTVR+L   D   K         +  +  A + +++S L
Sbjct: 27  DDMSSCSSNGFKSFPRRHCC-TTVRYLVEKDFKAKDSTKAXRLLRKSRSKAAASTTISAL 85

Query: 256 KRASTAVLNAVKHLPFASAAV-------KPRRAILPRSISKRLFKRSFFWRKS---DRKE 107
           +RAS AV+NAVK LPF+S          + R+ ILPRS+S++L KR  FW+++   +  E
Sbjct: 86  QRASEAVINAVKJLPFSSVKAPSXSVKNRSRKGILPRSLSRKLLKRK-FWKRTAVEEEIE 144

Query: 106 IARWKSFHTVADIKSEPS 53
           I RWKSFH   + K + S
Sbjct: 145 IERWKSFHDFLEEKQKSS 162


>ref|XP_002298068.1| predicted protein [Populus trichocarpa] gi|222845326|gb|EEE82873.1|
           predicted protein [Populus trichocarpa]
          Length = 471

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 61/159 (38%), Positives = 92/159 (57%), Gaps = 26/159 (16%)
 Frame = -1

Query: 403 DDFSSCSSNGFRSFPRRQCCTTTVRFLDLAKKKQNHQIP---------APSKSSLSMLKR 251
           DD SSCSSNGF+SFPRR+CCTT    L++  K +  Q P           + +++S L++
Sbjct: 29  DDQSSCSSNGFKSFPRRRCCTTVRLLLEIDLKTKQQQQPRQLFKRSKSKAASTTISALQK 88

Query: 250 ASTAVLNAVKHLPFAS--------AAVKPRRAILPRSISKRLFKRSFFWRKS-------- 119
           AS AV+ AVK LPF S        +  + R+ +LPRS+S++LFK++ FWRK+        
Sbjct: 89  ASVAVMKAVKLLPFPSPNSTVRSPSPSRTRKGLLPRSLSRKLFKKN-FWRKAADQHGQCK 147

Query: 118 DRKEIARWKSFHTVADIKSEPS-ALNSPIKTSAAENSRN 5
           +R EI  W+ F    + + + S  + S I TS++ NS +
Sbjct: 148 ERNEIRGWRLFGEFLEEQDKLSDQITSGISTSSSSNSNS 186


>ref|XP_004143994.1| PREDICTED: uncharacterized protein LOC101219575 [Cucumis sativus]
          Length = 476

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 63/132 (47%), Positives = 80/132 (60%), Gaps = 14/132 (10%)
 Frame = -1

Query: 403 DDFSSCSSNGFRSFPRRQCCTTTVRFL---DLAKKKQN---HQIPAPSK-----SSLSML 257
           DDFSSCSSNGFRSFPRRQCC+TTVRFL   DL  K  +     +P  +      S++S L
Sbjct: 31  DDFSSCSSNGFRSFPRRQCCSTTVRFLLEIDLKVKDSSVTKRFLPRTTSRKIALSTISTL 90

Query: 256 KRASTAVLNAVKHLPFASAAVKPRRAILPRSISKRLFKRSFFWRKSDRKE---IARWKSF 86
           +RAS AVL A K  P  S+    R++  PRSIS++L  ++ F +KSD  +     RWKSF
Sbjct: 91  QRASDAVLRAFKQFPLPSS----RKSFFPRSISRKLISKA-FRKKSDIVDPNINKRWKSF 145

Query: 85  HTVADIKSEPSA 50
               D K  PS+
Sbjct: 146 KEFLDEKEPPSS 157


>ref|XP_002304465.1| predicted protein [Populus trichocarpa] gi|222841897|gb|EEE79444.1|
           predicted protein [Populus trichocarpa]
          Length = 222

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 65/161 (40%), Positives = 91/161 (56%), Gaps = 28/161 (17%)
 Frame = -1

Query: 403 DDFSSCSSNGFRSFPRRQCCTTTVRFL-----DLAKKKQNHQIPAPSKSS------LSML 257
           DD SSCSS GF+SFPR  CC TTVRFL        +++Q  Q+   SKSS      +S L
Sbjct: 33  DDLSSCSSKGFKSFPRSHCC-TTVRFLLEVDHKTKQQRQQRQLYKRSKSSKAASTTISAL 91

Query: 256 KRASTAVLNAVKHLPFAS--------AAVKPRRAILPRSISKRLFKRSFFWRKS------ 119
           ++AS AV+NAVK LPF S        +  + R+ +LPR +S++LFK+S FWRK+      
Sbjct: 92  QKASVAVINAVKLLPFPSSNSTVKSPSPSRTRKGLLPRCLSRKLFKKS-FWRKTPDHNGQ 150

Query: 118 --DRKEIARWKSFHTVADIKSEPS-ALNSPIKTSAAENSRN 5
             +  EI  W+ FH   + +   S  + S I TS+  +S +
Sbjct: 151 CKESNEIRGWRLFHEFLEEQDRQSDQITSRISTSSRTSSNS 191


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