BLASTX nr result

ID: Bupleurum21_contig00031912 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00031912
         (287 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305188.1| predicted protein [Populus trichocarpa] gi|2...   127   7e-28
ref|XP_002518024.1| conserved hypothetical protein [Ricinus comm...   125   4e-27
ref|XP_002334699.1| predicted protein [Populus trichocarpa] gi|2...   124   6e-27
ref|XP_002302988.1| predicted protein [Populus trichocarpa] gi|2...   124   6e-27
emb|CBI27712.3| unnamed protein product [Vitis vinifera]              122   2e-26

>ref|XP_002305188.1| predicted protein [Populus trichocarpa] gi|222848152|gb|EEE85699.1|
           predicted protein [Populus trichocarpa]
          Length = 381

 Score =  127 bits (320), Expect = 7e-28
 Identities = 61/93 (65%), Positives = 70/93 (75%)
 Frame = -1

Query: 287 KQSAVNYIICFDIASHTFPLREQLQEQYGDKNHTEPLHCLFKNTSVKNVVPDPDLPRGCD 108
           KQSA NYI  FD + H FP RE LQ QYGDK H E  + LFKN S+KN+VPDPD+P GCD
Sbjct: 67  KQSAANYIKVFDPSVHAFPSREHLQHQYGDKVHPEADNSLFKNISLKNIVPDPDVPHGCD 126

Query: 107 VDSSEFDQQSGVKPIVGAGDRDETVTGLLENLS 9
            +S EFD Q GVKP +G+GDRDE +TGLL NLS
Sbjct: 127 ANSQEFDLQPGVKPKLGSGDRDEALTGLLANLS 159


>ref|XP_002518024.1| conserved hypothetical protein [Ricinus communis]
           gi|223543006|gb|EEF44542.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 373

 Score =  125 bits (314), Expect = 4e-27
 Identities = 57/95 (60%), Positives = 74/95 (77%)
 Frame = -1

Query: 287 KQSAVNYIICFDIASHTFPLREQLQEQYGDKNHTEPLHCLFKNTSVKNVVPDPDLPRGCD 108
           K SA NYI  FD ++H FP R+QLQ+QY DK H+EP +CLFKN +VKN+V DPD+P  C+
Sbjct: 85  KISAANYIKNFDPSAHVFPQRDQLQQQYCDKVHSEPYNCLFKNAAVKNIVADPDVPHSCN 144

Query: 107 VDSSEFDQQSGVKPIVGAGDRDETVTGLLENLSFQ 3
            +S EFD Q+G KP +G+GDRDET+TGLL +LS +
Sbjct: 145 ANSQEFDMQTGAKPKLGSGDRDETLTGLLVHLSME 179


>ref|XP_002334699.1| predicted protein [Populus trichocarpa] gi|222874201|gb|EEF11332.1|
           predicted protein [Populus trichocarpa]
          Length = 380

 Score =  124 bits (312), Expect = 6e-27
 Identities = 59/93 (63%), Positives = 69/93 (74%)
 Frame = -1

Query: 287 KQSAVNYIICFDIASHTFPLREQLQEQYGDKNHTEPLHCLFKNTSVKNVVPDPDLPRGCD 108
           KQSA NYI  FD + H FP REQLQ QY DK H E  + +FKN S+KN+VPDPD+PRGCD
Sbjct: 66  KQSAANYIKLFDPSVHAFPSREQLQHQYSDKVHPEAHNSIFKNDSLKNIVPDPDVPRGCD 125

Query: 107 VDSSEFDQQSGVKPIVGAGDRDETVTGLLENLS 9
            +S EFD Q G KP +G+GDRDE + GLL NLS
Sbjct: 126 ANSPEFDLQPGAKPKLGSGDRDEALLGLLANLS 158


>ref|XP_002302988.1| predicted protein [Populus trichocarpa] gi|222844714|gb|EEE82261.1|
           predicted protein [Populus trichocarpa]
          Length = 385

 Score =  124 bits (312), Expect = 6e-27
 Identities = 59/93 (63%), Positives = 69/93 (74%)
 Frame = -1

Query: 287 KQSAVNYIICFDIASHTFPLREQLQEQYGDKNHTEPLHCLFKNTSVKNVVPDPDLPRGCD 108
           KQSA NYI  FD + H FP REQLQ QY DK H E  + +FKN S+KN+VPDPD+PRGCD
Sbjct: 71  KQSAANYIKLFDPSVHAFPSREQLQHQYSDKVHPEAHNSIFKNDSLKNIVPDPDVPRGCD 130

Query: 107 VDSSEFDQQSGVKPIVGAGDRDETVTGLLENLS 9
            +S EFD Q G KP +G+GDRDE + GLL NLS
Sbjct: 131 ANSPEFDLQPGAKPKLGSGDRDEALLGLLANLS 163


>emb|CBI27712.3| unnamed protein product [Vitis vinifera]
          Length = 408

 Score =  122 bits (307), Expect = 2e-26
 Identities = 54/95 (56%), Positives = 74/95 (77%)
 Frame = -1

Query: 287 KQSAVNYIICFDIASHTFPLREQLQEQYGDKNHTEPLHCLFKNTSVKNVVPDPDLPRGCD 108
           KQ+A +++  FD +S  FP +EQLQ+QY D+ H EP +CL +N +VKNVVPDPD+P GCD
Sbjct: 94  KQTATDFVKGFDPSSQAFPQQEQLQQQYCDRVHPEPYNCLLRNATVKNVVPDPDVPSGCD 153

Query: 107 VDSSEFDQQSGVKPIVGAGDRDETVTGLLENLSFQ 3
           ++S EFD + G KP +G+GDRDE +TGLL+NLS +
Sbjct: 154 INSPEFDLEPGAKPKLGSGDRDEALTGLLQNLSLE 188


Top