BLASTX nr result

ID: Bupleurum21_contig00031903 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00031903
         (466 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002429204.1| zinc finger and cchc domain-containing prote...    54   1e-05

>ref|XP_002429204.1| zinc finger and cchc domain-containing protein, putative [Pediculus
           humanus corporis] gi|212514093|gb|EEB16466.1| zinc
           finger and cchc domain-containing protein, putative
           [Pediculus humanus corporis]
          Length = 709

 Score = 54.3 bits (129), Expect = 1e-05
 Identities = 48/156 (30%), Positives = 77/156 (49%), Gaps = 4/156 (2%)
 Frame = +3

Query: 6   LLILKHKPSGIDVDLTLNKFETAYIAKFIEYSISAHPLVKMLILTVKKWLKDQEVKKSML 185
           +LIL    +G+  D++     +   ++ I++  S    VK ++L VK W+KD   KKS+L
Sbjct: 470 ILILTEISTGLQCDISFKNGLSVNNSRLIKFFTSLDERVKPIMLFVKYWIKDYG-KKSIL 528

Query: 186 PSVSPALMCIAYLQERKKLPVLPT----EEMDCSKLNSKGSKGEFYDDALEIYKDAIKQS 353
            S +  LM + YLQ R   P+LPT    E+    K N+       +DD +  Y   IK S
Sbjct: 529 SSFALTLMVVFYLQ-RLSQPILPTVDELEKKFVGKRNTVAGWNCDFDDNIVNYVYRIKNS 587

Query: 354 KAENPFNNLSIGEIVHDFFIHYSRIHNFKKDVISVL 461
            +      L + +   +F+IH+    N+ + VIS L
Sbjct: 588 NSV-----LDLIKGFFEFYIHF----NYDEYVISPL 614


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