BLASTX nr result

ID: Bupleurum21_contig00031890 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00031890
         (306 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634816.1| PREDICTED: protein strawberry notch-like [Vi...   140   8e-32
emb|CBI24134.3| unnamed protein product [Vitis vinifera]              140   8e-32
ref|XP_003545739.1| PREDICTED: protein strawberry notch-like [Gl...   140   1e-31
gb|AAC17076.1| Similar to D. melanogaster sno gene gb|U95760. ES...   138   5e-31
ref|NP_178053.4| RING/FYVE/PHD zinc finger domain-containing pro...   138   5e-31

>ref|XP_003634816.1| PREDICTED: protein strawberry notch-like [Vitis vinifera]
          Length = 1242

 Score =  140 bits (354), Expect = 8e-32
 Identities = 70/100 (70%), Positives = 85/100 (85%)
 Frame = -3

Query: 301 RAAVFWADLRVKLLSAVKSLPDEQRPNLSQLLRLYWANHQRFFKHMCMSAKVPAVVRICC 122
           RAA FWA+LRV+LLSA   L DE +PN SQ+ R+YWA+HQRFF+HMCMSAKVPA VR+  
Sbjct: 464 RAAEFWAELRVELLSASAFLTDE-KPNSSQVWRVYWASHQRFFRHMCMSAKVPAAVRLSK 522

Query: 121 KAVTEDKCVVIGLQSTGEARTEEVVTKHGVDHDNFISGAR 2
           +A+ E+KCVVIGLQSTGEARTEE VTK+G++ D+FISG R
Sbjct: 523 QALMENKCVVIGLQSTGEARTEEAVTKYGLELDDFISGPR 562


>emb|CBI24134.3| unnamed protein product [Vitis vinifera]
          Length = 1294

 Score =  140 bits (354), Expect = 8e-32
 Identities = 70/100 (70%), Positives = 85/100 (85%)
 Frame = -3

Query: 301 RAAVFWADLRVKLLSAVKSLPDEQRPNLSQLLRLYWANHQRFFKHMCMSAKVPAVVRICC 122
           RAA FWA+LRV+LLSA   L DE +PN SQ+ R+YWA+HQRFF+HMCMSAKVPA VR+  
Sbjct: 516 RAAEFWAELRVELLSASAFLTDE-KPNSSQVWRVYWASHQRFFRHMCMSAKVPAAVRLSK 574

Query: 121 KAVTEDKCVVIGLQSTGEARTEEVVTKHGVDHDNFISGAR 2
           +A+ E+KCVVIGLQSTGEARTEE VTK+G++ D+FISG R
Sbjct: 575 QALMENKCVVIGLQSTGEARTEEAVTKYGLELDDFISGPR 614


>ref|XP_003545739.1| PREDICTED: protein strawberry notch-like [Glycine max]
          Length = 1252

 Score =  140 bits (353), Expect = 1e-31
 Identities = 70/100 (70%), Positives = 83/100 (83%)
 Frame = -3

Query: 301 RAAVFWADLRVKLLSAVKSLPDEQRPNLSQLLRLYWANHQRFFKHMCMSAKVPAVVRICC 122
           +AA FWA+LRV+LLSA   L D  +PN SQL RLYWA+HQRFF+HMCMSAKVPA VR+  
Sbjct: 481 KAAEFWAELRVELLSASAFLND--KPNSSQLWRLYWASHQRFFRHMCMSAKVPAAVRLAH 538

Query: 121 KAVTEDKCVVIGLQSTGEARTEEVVTKHGVDHDNFISGAR 2
           KA+ E+KCVVIGLQSTGEARTEE VTK+G + D+F+SG R
Sbjct: 539 KALVEEKCVVIGLQSTGEARTEEAVTKYGSELDDFVSGPR 578


>gb|AAC17076.1| Similar to D. melanogaster sno gene gb|U95760. EST gb|N97148 and
           gb|Z26221 come from this gene [Arabidopsis thaliana]
          Length = 1257

 Score =  138 bits (347), Expect = 5e-31
 Identities = 65/101 (64%), Positives = 85/101 (84%)
 Frame = -3

Query: 304 NRAAVFWADLRVKLLSAVKSLPDEQRPNLSQLLRLYWANHQRFFKHMCMSAKVPAVVRIC 125
           N++A FWA+LR++LLSA   LP+E +PN SQL RLYW++HQRFF+H+CMSAKVP  VR+ 
Sbjct: 513 NKSAEFWAELRIELLSASAFLPNE-KPNSSQLWRLYWSSHQRFFRHLCMSAKVPVTVRLA 571

Query: 124 CKAVTEDKCVVIGLQSTGEARTEEVVTKHGVDHDNFISGAR 2
            KA++ +KCVVIGLQSTGEARTEE V K+G++ D+F+SG R
Sbjct: 572 KKALSTNKCVVIGLQSTGEARTEEAVNKYGLELDDFVSGPR 612


>ref|NP_178053.4| RING/FYVE/PHD zinc finger domain-containing protein [Arabidopsis
           thaliana] gi|332198112|gb|AEE36233.1| RING/FYVE/PHD zinc
           finger domain-containing protein [Arabidopsis thaliana]
          Length = 1295

 Score =  138 bits (347), Expect = 5e-31
 Identities = 65/101 (64%), Positives = 85/101 (84%)
 Frame = -3

Query: 304 NRAAVFWADLRVKLLSAVKSLPDEQRPNLSQLLRLYWANHQRFFKHMCMSAKVPAVVRIC 125
           N++A FWA+LR++LLSA   LP+E +PN SQL RLYW++HQRFF+H+CMSAKVP  VR+ 
Sbjct: 513 NKSAEFWAELRIELLSASAFLPNE-KPNSSQLWRLYWSSHQRFFRHLCMSAKVPVTVRLA 571

Query: 124 CKAVTEDKCVVIGLQSTGEARTEEVVTKHGVDHDNFISGAR 2
            KA++ +KCVVIGLQSTGEARTEE V K+G++ D+F+SG R
Sbjct: 572 KKALSTNKCVVIGLQSTGEARTEEAVNKYGLELDDFVSGPR 612


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