BLASTX nr result

ID: Bupleurum21_contig00031886 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00031886
         (929 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525966.1| conserved hypothetical protein [Ricinus comm...   121   9e-28
ref|XP_002329268.1| predicted protein [Populus trichocarpa] gi|2...   110   5e-22
ref|XP_002457497.1| hypothetical protein SORBIDRAFT_03g008320 [S...   107   3e-21
ref|XP_003516862.1| PREDICTED: uncharacterized protein LOC100782...   107   4e-21
tpg|DAA53802.1| TPA: hypothetical protein ZEAMMB73_148989 [Zea m...   107   5e-21

>ref|XP_002525966.1| conserved hypothetical protein [Ricinus communis]
           gi|223534698|gb|EEF36390.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 576

 Score =  121 bits (304), Expect(2) = 9e-28
 Identities = 79/189 (41%), Positives = 105/189 (55%), Gaps = 4/189 (2%)
 Frame = +3

Query: 39  VDSKSLFNNVLVSKKDVASASGSFLNKGLIPPLVTPSHFLQPGTSIASFXXXXXXXXXXX 218
           V SKS+  ++  + + + S S    N+G IP LVTP HFLQPGT + S            
Sbjct: 325 VPSKSMSESLSSNTRALVSVS----NEGAIPSLVTPGHFLQPGT-VPSLQSSQAAQKDVE 379

Query: 219 XXXXLASTGQTLETLPGDKAHILPLPPLVNYKIHGDASDSHYINR---RGRGQGHWASDN 389
                 S   +   +   +  ILPLP   + +++G    +++ +R   RGRG   W  D 
Sbjct: 380 AVQSSESPPPSTVAVMEMQEPILPLPCPPDRRVYGAPMHTYHGSRGHERGRGNRVW--DA 437

Query: 390 VTSFTEEFDFVSMNKKFNKNEVWGQLGKNNSTQED-RYSQDRDNVLKTWKTTSETKPVYV 566
            T F E+FDF +MN+KFNK+EVWG LGK+N  QED   S+D DN L  +    E KPVYV
Sbjct: 438 ATRFEEDFDFTAMNEKFNKDEVWGHLGKSNKAQEDEEESEDEDNELSKY----EKKPVYV 493

Query: 567 KDDFFDSLS 593
           KDDFFDSLS
Sbjct: 494 KDDFFDSLS 502



 Score = 28.9 bits (63), Expect(2) = 9e-28
 Identities = 14/31 (45%), Positives = 18/31 (58%)
 Frame = +2

Query: 704 AGGLLSYMQTFGNSARHRVGHGTRGYGCNGR 796
           +G +    +TFGN +RHR G G  G G  GR
Sbjct: 518 SGQIRKNTETFGNFSRHRGGGGGWGPGRGGR 548


>ref|XP_002329268.1| predicted protein [Populus trichocarpa] gi|222870722|gb|EEF07853.1|
           predicted protein [Populus trichocarpa]
          Length = 564

 Score =  110 bits (275), Expect = 5e-22
 Identities = 69/185 (37%), Positives = 94/185 (50%), Gaps = 6/185 (3%)
 Frame = +3

Query: 57  FNNVLVSKKDVASASGSFLNKGLIPPLVTPSHFLQPGT----SIASFXXXXXXXXXXXXX 224
           F ++      +  AS S  N+G  P LVTP   LQPG     S+ S              
Sbjct: 317 FKSISEPPTSIMRASSSVTNEGKTPSLVTPGQLLQPGPPIMPSLQSSHIAQKDVEVVQVS 376

Query: 225 XXLASTGQTLETLPGDKAHILPLPPLVNYKIHGDASDSHYINR--RGRGQGHWASDNVTS 398
               S       L   +  ILPLP    +K++G    ++  +R  RGRG+G+  + + T 
Sbjct: 377 SPELSAPPPTTALTEVQESILPLPSQPEHKVYGAPMYTYQSSRGGRGRGRGNEIARSATR 436

Query: 399 FTEEFDFVSMNKKFNKNEVWGQLGKNNSTQEDRYSQDRDNVLKTWKTTSETKPVYVKDDF 578
           F E+FDF +MN+KFNK EVWG LGK++  Q+     D D+V     +  E KPVYVKDDF
Sbjct: 437 FEEDFDFTAMNEKFNKEEVWGHLGKSHKAQDRDDLLDEDDV---GSSKHEAKPVYVKDDF 493

Query: 579 FDSLS 593
           FDS+S
Sbjct: 494 FDSIS 498


>ref|XP_002457497.1| hypothetical protein SORBIDRAFT_03g008320 [Sorghum bicolor]
           gi|241929472|gb|EES02617.1| hypothetical protein
           SORBIDRAFT_03g008320 [Sorghum bicolor]
          Length = 662

 Score =  107 bits (268), Expect = 3e-21
 Identities = 61/122 (50%), Positives = 79/122 (64%), Gaps = 8/122 (6%)
 Frame = +3

Query: 261 LPGDKAHILPLPPLVNYKIHGDASDSHYINR-RGRGQGHWASDNVTSFTEEFDFVSMNKK 437
           LP +K  ILPLP     K +G  S +H+  R RGRG+G   S +VT+FTEEFDF +MN+K
Sbjct: 450 LPENKEPILPLPKQTPQKYNGSGSHNHHNFRGRGRGRGSAFSQSVTAFTEEFDFTAMNEK 509

Query: 438 FNKNEVWGQLGKNNSTQ-------EDRYSQDRDNVLKTWKTTSETKPVYVKDDFFDSLSS 596
           FNK+EVWG LGK + ++       +D + +D + V +T       KPVYVKDDFFDSLSS
Sbjct: 510 FNKDEVWGHLGKKSQSRDKDGEVGDDVFDEDLE-VEETDNPELAVKPVYVKDDFFDSLSS 568

Query: 597 NT 602
            T
Sbjct: 569 GT 570


>ref|XP_003516862.1| PREDICTED: uncharacterized protein LOC100782890 [Glycine max]
          Length = 610

 Score =  107 bits (267), Expect = 4e-21
 Identities = 73/190 (38%), Positives = 96/190 (50%), Gaps = 19/190 (10%)
 Frame = +3

Query: 87  VASASGSFLNKGLIPPLVTPSHFLQPGTSIASFXXXXXXXXXXXXXXXLASTGQTLETLP 266
           V  +S S   +   P LVTP   LQPG SI S                ++ST     ++P
Sbjct: 359 VLGSSTSIHTETSAPSLVTPGQLLQPGPSIVSSAQPSQAPHKDVEVVQVSSTSSPEPSVP 418

Query: 267 GD---KAHILPLPPLV--NYKIHGDASDSHY---INRRGRGQGHWASDNVTSFTEEFDFV 422
                +  ILPLP     +Y+  G  S +H+      RGRG+G      VT FTE+FDF+
Sbjct: 419 VSAETQPPILPLPVTSRPSYRPGGAPSQTHHGYNYRGRGRGRGTGGLHPVTKFTEDFDFM 478

Query: 423 SMNKKFNKNEVWGQLGKN-----------NSTQEDRYSQDRDNVLKTWKTTSETKPVYVK 569
           +MN+KF K+EVWG LGK+           N+  ED   +D D+V     +  E KP+Y K
Sbjct: 479 AMNEKFKKDEVWGHLGKSKSHSKEKDGEENAFDEDYQDEDNDDV-----SNIEVKPIYNK 533

Query: 570 DDFFDSLSSN 599
           DDFFDSLSSN
Sbjct: 534 DDFFDSLSSN 543


>tpg|DAA53802.1| TPA: hypothetical protein ZEAMMB73_148989 [Zea mays]
          Length = 585

 Score =  107 bits (266), Expect = 5e-21
 Identities = 60/124 (48%), Positives = 80/124 (64%), Gaps = 8/124 (6%)
 Frame = +3

Query: 255 ETLPGDKAHILPLPPLVNYKIHGDASDSHYINR-RGRGQGHWASDNVTSFTEEFDFVSMN 431
           ++LP +K  ILPLP     K +G    +H+  R RGRG+G   S +VT+FTEEFDF +MN
Sbjct: 441 QSLPENKEPILPLPKQTPQKYNGSGLHNHHNFRGRGRGRGSAFSQSVTTFTEEFDFTAMN 500

Query: 432 KKFNKNEVWGQLGKNNSTQ-------EDRYSQDRDNVLKTWKTTSETKPVYVKDDFFDSL 590
           +KFNK+EVWG LGK + ++       +D + +D + V +T       KPVYVKDDFFDSL
Sbjct: 501 EKFNKDEVWGHLGKKSQSRDKDGEVGDDVFDEDLE-VEETDNPELSVKPVYVKDDFFDSL 559

Query: 591 SSNT 602
           SS T
Sbjct: 560 SSGT 563


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