BLASTX nr result

ID: Bupleurum21_contig00031883 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00031883
         (472 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314701.1| predicted protein [Populus trichocarpa] gi|2...   194   8e-48
ref|XP_002312528.1| predicted protein [Populus trichocarpa] gi|2...   184   5e-45
ref|XP_002282170.1| PREDICTED: uncharacterized protein LOC100247...   183   1e-44
emb|CAN68227.1| hypothetical protein VITISV_040534 [Vitis vinifera]   179   2e-43
ref|XP_004134139.1| PREDICTED: uncharacterized protein LOC101206...   172   3e-41

>ref|XP_002314701.1| predicted protein [Populus trichocarpa] gi|222863741|gb|EEF00872.1|
           predicted protein [Populus trichocarpa]
          Length = 427

 Score =  194 bits (492), Expect = 8e-48
 Identities = 101/162 (62%), Positives = 117/162 (72%), Gaps = 5/162 (3%)
 Frame = -1

Query: 472 VKPWYLSLGDTSASKVGPTNTSLAGPALMXXXXXXXXXXXXXXXRTTRGNIN-----TVA 308
           +KPW+L+L DTSASKVGPTN S  GPAL+               RT RG++N      +A
Sbjct: 266 LKPWHLTLTDTSASKVGPTNLSSLGPALISPLNARSFSFASPVARTPRGSMNGGSYTRLA 325

Query: 307 RKSFFPSTPLPQKTHAFDHSSIKQPRTPKPSFLQSPAMSFFTNKKECHASKSDKCRESFY 128
           +KS FPSTPLPQ+    D   I QPRTP+PSFLQSPA+ F   KKECH SK+D+ RESF 
Sbjct: 326 QKSLFPSTPLPQRVTTSDTLKISQPRTPRPSFLQSPALFF---KKECHVSKADRSRESFV 382

Query: 127 VFLKFYRRPYDEMTYRSKMRPPLGGLISVVSPQLRRRHMSVS 2
            FLKFYRRPYDEM YRSKMRPPLGGLIS+VSP ++RRHMSVS
Sbjct: 383 PFLKFYRRPYDEMIYRSKMRPPLGGLISIVSPHIKRRHMSVS 424


>ref|XP_002312528.1| predicted protein [Populus trichocarpa] gi|222852348|gb|EEE89895.1|
           predicted protein [Populus trichocarpa]
          Length = 429

 Score =  184 bits (468), Expect = 5e-45
 Identities = 98/162 (60%), Positives = 113/162 (69%), Gaps = 5/162 (3%)
 Frame = -1

Query: 472 VKPWYLSLGDTSASKVGPTNTSLAGPALMXXXXXXXXXXXXXXXRTTRGNINTVA----- 308
           +KPW+LSL DTS+SKVGPT+ S  GPAL+               R  RG+IN  +     
Sbjct: 268 LKPWHLSLTDTSSSKVGPTSLSHLGPALVSPLNARSYSFASPVARAPRGSINGCSYTRPT 327

Query: 307 RKSFFPSTPLPQKTHAFDHSSIKQPRTPKPSFLQSPAMSFFTNKKECHASKSDKCRESFY 128
           RKS FPSTPLPQ+    D   I  PRTP+PSFLQSPA+ F   KKECH SK+D+ RESF 
Sbjct: 328 RKSLFPSTPLPQRVTEGDPIKISLPRTPRPSFLQSPALFF---KKECHVSKADRSRESFV 384

Query: 127 VFLKFYRRPYDEMTYRSKMRPPLGGLISVVSPQLRRRHMSVS 2
            F KFYRRPYDEM YRSKMRPPLGGLIS+VSP +RRRH+SVS
Sbjct: 385 PFFKFYRRPYDEMIYRSKMRPPLGGLISIVSPHIRRRHVSVS 426


>ref|XP_002282170.1| PREDICTED: uncharacterized protein LOC100247799 [Vitis vinifera]
           gi|297737041|emb|CBI26242.3| unnamed protein product
           [Vitis vinifera]
          Length = 423

 Score =  183 bits (465), Expect = 1e-44
 Identities = 101/166 (60%), Positives = 117/166 (70%), Gaps = 9/166 (5%)
 Frame = -1

Query: 472 VKPWYLSLGDTSASKVGPTNTS--LAGPALMXXXXXXXXXXXXXXXRTTRGNI-----NT 314
           +KPWYLSL DTS SKVGPT+ S  + GPAL+               RT RG I     + 
Sbjct: 258 LKPWYLSLADTSGSKVGPTSPSPSMLGPALISPLNARSLSFASPAARTPRGGIYGGSASR 317

Query: 313 VARKSFFPSTPLPQKTH--AFDHSSIKQPRTPKPSFLQSPAMSFFTNKKECHASKSDKCR 140
            A+KS F STPLP++T+    D  SI  PRTP+PSFLQSPA+ F   +KECH S++DK R
Sbjct: 318 PAKKSLFASTPLPERTNYGKNDAMSINHPRTPRPSFLQSPALFF---RKECHVSRADKSR 374

Query: 139 ESFYVFLKFYRRPYDEMTYRSKMRPPLGGLISVVSPQLRRRHMSVS 2
           ESF  FLKFYRRPYDEM YRSKMRPPLGGLIS+VSPQL+RRHMSVS
Sbjct: 375 ESFLPFLKFYRRPYDEMIYRSKMRPPLGGLISIVSPQLKRRHMSVS 420


>emb|CAN68227.1| hypothetical protein VITISV_040534 [Vitis vinifera]
          Length = 465

 Score =  179 bits (455), Expect = 2e-43
 Identities = 100/166 (60%), Positives = 116/166 (69%), Gaps = 9/166 (5%)
 Frame = -1

Query: 472 VKPWYLSLGDTSASKVGPTNTS--LAGPALMXXXXXXXXXXXXXXXRTTRGNI-----NT 314
           +KPWYLSL DTS SKVGPT+ S  + GPAL+               RT RG I     + 
Sbjct: 300 LKPWYLSLADTSGSKVGPTSPSPSMLGPALISPLNARSLSFASPAARTPRGGIYGGSASR 359

Query: 313 VARKSFFPSTPLPQKTH--AFDHSSIKQPRTPKPSFLQSPAMSFFTNKKECHASKSDKCR 140
            A+KS F STPL ++T+    D  SI  PRTP+PSFLQSPA+ F   +KECH S++DK R
Sbjct: 360 PAKKSLFASTPLLERTNYGKNDAMSINHPRTPRPSFLQSPALFF---RKECHVSRADKSR 416

Query: 139 ESFYVFLKFYRRPYDEMTYRSKMRPPLGGLISVVSPQLRRRHMSVS 2
           ESF  FLKFYRRPYDEM YRSKMRPPLGGLIS+VSPQL+RRHMSVS
Sbjct: 417 ESFLPFLKFYRRPYDEMIYRSKMRPPLGGLISIVSPQLKRRHMSVS 462


>ref|XP_004134139.1| PREDICTED: uncharacterized protein LOC101206735 [Cucumis sativus]
           gi|449513431|ref|XP_004164324.1| PREDICTED:
           uncharacterized LOC101206735 [Cucumis sativus]
          Length = 423

 Score =  172 bits (436), Expect = 3e-41
 Identities = 94/169 (55%), Positives = 113/169 (66%), Gaps = 12/169 (7%)
 Frame = -1

Query: 472 VKPWYLSLGDTSASKVGPTNTSLAGPALMXXXXXXXXXXXXXXXRTTRGNINT------- 314
           +KPWYLSL DTSASKVGPT+ S  GPAL+               R  RG IN        
Sbjct: 255 LKPWYLSLTDTSASKVGPTSPSPLGPALISPLNARSLSFASPAARMPRGEINDSSSFSSR 314

Query: 313 VARKSFFPSTPLPQKTHAFDHSSIK-----QPRTPKPSFLQSPAMSFFTNKKECHASKSD 149
           + RKS FPSTPLP ++ A D    K      PRTP+PSFLQSPA+ F   ++ECH S+++
Sbjct: 315 LTRKSLFPSTPLPPRSAAMDGGGKKGKIKNPPRTPRPSFLQSPAVFF---RRECHVSRTE 371

Query: 148 KCRESFYVFLKFYRRPYDEMTYRSKMRPPLGGLISVVSPQLRRRHMSVS 2
           + RE+F   LKFYRRPYDEM YRSKMRPPLGGLIS+V+P LRRRH+S+S
Sbjct: 372 RNREAFRSVLKFYRRPYDEMVYRSKMRPPLGGLISIVTPHLRRRHVSMS 420


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