BLASTX nr result

ID: Bupleurum21_contig00031868 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00031868
         (439 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331548.1| predicted protein [Populus trichocarpa] gi|2...   141   6e-32
ref|XP_002331547.1| predicted protein [Populus trichocarpa] gi|2...   140   1e-31
ref|XP_002518439.1| conserved hypothetical protein [Ricinus comm...   137   9e-31
ref|XP_002331546.1| predicted protein [Populus trichocarpa] gi|2...   132   3e-29
ref|XP_002518440.1| conserved hypothetical protein [Ricinus comm...   130   1e-28

>ref|XP_002331548.1| predicted protein [Populus trichocarpa] gi|222873772|gb|EEF10903.1|
           predicted protein [Populus trichocarpa]
          Length = 152

 Score =  141 bits (355), Expect = 6e-32
 Identities = 71/155 (45%), Positives = 95/155 (61%), Gaps = 11/155 (7%)
 Frame = -2

Query: 438 MEYLYKIIFMIFLLTMAMTSTIFATVSNEDDNLDLD-----------VPNEASSSFIRQT 292
           M+YL KI F++ +L M++   + AT   E+  LD D           + N+ ++S +R  
Sbjct: 1   MKYL-KIFFLLAML-MSLAIILSATTPEEESFLDFDNEDEENSDLPQLENQETTSSLRGA 58

Query: 291 GRLANKQPRGWRTCDKYPRVCDNKGSSGPDCCKKQCVDVMVDKAXXXXXXXXXKYSQLCC 112
            R    Q R   TCDKYPR C  KGS GPDCCKK+CV+VM DK          KY ++CC
Sbjct: 59  NRFL-AQTRAVMTCDKYPRACRAKGSPGPDCCKKKCVNVMTDKLNCGMCGKKCKYPEICC 117

Query: 111 QGKCVNPSKDKSNCGSCNNKCKRGSSCAFGMCSYA 7
           +G+CVNP  +K NCG C+NKCK+GS+C +GMCSYA
Sbjct: 118 KGQCVNPMSNKKNCGGCSNKCKKGSTCQYGMCSYA 152


>ref|XP_002331547.1| predicted protein [Populus trichocarpa] gi|222873771|gb|EEF10902.1|
           predicted protein [Populus trichocarpa]
          Length = 155

 Score =  140 bits (353), Expect = 1e-31
 Identities = 66/150 (44%), Positives = 91/150 (60%), Gaps = 13/150 (8%)
 Frame = -2

Query: 417 IFMIFLLTMAMTSTIFATVSNED----------DNLDLDVP---NEASSSFIRQTGRLAN 277
           IF +  + MA+  ++ AT S ED          D  + D+P   ++ ++S +R   R   
Sbjct: 6   IFFVLAIIMALAVSLTATPSEEDQSSLDFSENEDEENFDLPWLESQETTSSLRGANRFLA 65

Query: 276 KQPRGWRTCDKYPRVCDNKGSSGPDCCKKQCVDVMVDKAXXXXXXXXXKYSQLCCQGKCV 97
           ++ R   TCDKYPR C  KGS GPDCCKK+CV+VM D+          KY ++CC+G+CV
Sbjct: 66  QKIRAVMTCDKYPRACRAKGSPGPDCCKKKCVNVMTDRLNCGMCGKKCKYPEICCKGQCV 125

Query: 96  NPSKDKSNCGSCNNKCKRGSSCAFGMCSYA 7
           NP  +K NCG C+NKCK+GS C +GMCSYA
Sbjct: 126 NPMSNKKNCGGCSNKCKKGSKCQYGMCSYA 155


>ref|XP_002518439.1| conserved hypothetical protein [Ricinus communis]
           gi|223542284|gb|EEF43826.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 156

 Score =  137 bits (345), Expect = 9e-31
 Identities = 67/150 (44%), Positives = 94/150 (62%), Gaps = 11/150 (7%)
 Frame = -2

Query: 423 KIIFMIFLLTMAMTSTIFATVSNE---------DDNLDLDVP--NEASSSFIRQTGRLAN 277
           +I+F + +L     + + AT +NE         D N +L +P  ++ +S  +R +  LA+
Sbjct: 7   RILFTLLVLVTTGINILSATTTNEKLQAKNENNDTNGELPLPRSDQEASYPLRHSRFLAS 66

Query: 276 KQPRGWRTCDKYPRVCDNKGSSGPDCCKKQCVDVMVDKAXXXXXXXXXKYSQLCCQGKCV 97
                  TCD+YP VC  KGS+GP CC+KQCV+VM D++         KYS+ CCQGKCV
Sbjct: 67  NPRPAAMTCDRYPSVCGAKGSAGPYCCRKQCVNVMTDESNCGKCGKKCKYSETCCQGKCV 126

Query: 96  NPSKDKSNCGSCNNKCKRGSSCAFGMCSYA 7
           N S D+ NCG CNN+CK+GSSCA+G+CSYA
Sbjct: 127 NVSNDEKNCGKCNNRCKKGSSCAYGLCSYA 156


>ref|XP_002331546.1| predicted protein [Populus trichocarpa] gi|222873770|gb|EEF10901.1|
           predicted protein [Populus trichocarpa]
          Length = 144

 Score =  132 bits (332), Expect = 3e-29
 Identities = 61/120 (50%), Positives = 79/120 (65%), Gaps = 3/120 (2%)
 Frame = -2

Query: 357 NEDDNLDLDVP---NEASSSFIRQTGRLANKQPRGWRTCDKYPRVCDNKGSSGPDCCKKQ 187
           N DD  + D+P   NE ++S +R   R    Q R   TCDKYPRVC   GS GPDCCKK+
Sbjct: 26  NNDDEGNSDLPWPENEETTSSLRGANRFL-AQTRAVMTCDKYPRVCRVIGSPGPDCCKKK 84

Query: 186 CVDVMVDKAXXXXXXXXXKYSQLCCQGKCVNPSKDKSNCGSCNNKCKRGSSCAFGMCSYA 7
           CV+V+ D+          KY ++CC+G+CVNP  +K NCG C+NKCK+GS+C +GMCSYA
Sbjct: 85  CVNVITDRLNCGMCGNKCKYPEICCKGQCVNPMSNKKNCGGCSNKCKKGSTCQYGMCSYA 144


>ref|XP_002518440.1| conserved hypothetical protein [Ricinus communis]
           gi|223542285|gb|EEF43827.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 159

 Score =  130 bits (326), Expect = 1e-28
 Identities = 63/152 (41%), Positives = 87/152 (57%), Gaps = 16/152 (10%)
 Frame = -2

Query: 414 FMIFLLTMAMTSTIFATVS---------NEDDNLDLDVP------NEASSSFIRQTGR-L 283
           F++  + MA  +++ ++ +         N+D + D D P          +S +R   R L
Sbjct: 8   FLLLAMLMAFAASVLSSTAPTEEETFLENDDGSTDDDTPWLNQDRETTLTSSLRGANRFL 67

Query: 282 ANKQPRGWRTCDKYPRVCDNKGSSGPDCCKKQCVDVMVDKAXXXXXXXXXKYSQLCCQGK 103
           A K  +   TCDKYPRVC  KGS GPDCCKK+CV+VM D           KY ++CC+G 
Sbjct: 68  AQKTSQAVMTCDKYPRVCRAKGSPGPDCCKKKCVNVMTDGLNCGNCGKKCKYPEICCKGG 127

Query: 102 CVNPSKDKSNCGSCNNKCKRGSSCAFGMCSYA 7
           CVNP  +  +CG CNNKCK+G+ C +GMCSYA
Sbjct: 128 CVNPMSNNKHCGGCNNKCKKGNKCVYGMCSYA 159


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