BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00031844
         (413 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635554.1| PREDICTED: pentatricopeptide repeat-containi...   177   8e-43
emb|CAN64316.1| hypothetical protein VITISV_027915 [Vitis vinifera]   177   8e-43
ref|XP_002270938.2| PREDICTED: pentatricopeptide repeat-containi...   177   1e-42
ref|XP_004147606.1| PREDICTED: pentatricopeptide repeat-containi...   169   2e-40
ref|XP_003609609.1| Pentatricopeptide repeat-containing protein ...   164   5e-39

>ref|XP_003635554.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g22760-like [Vitis vinifera]
           gi|296083555|emb|CBI23551.3| unnamed protein product
           [Vitis vinifera]
          Length = 580

 Score =  177 bits (449), Expect = 8e-43
 Identities = 88/138 (63%), Positives = 112/138 (81%), Gaps = 3/138 (2%)
 Frame = +2

Query: 8   SIRFLSENGEYVEAFAQYVGMQRSGLLPNTFAVSSALKACARVKILRGGMSIHGQVHKFG 187
           +IRF +++G++ EAFA YV MQR GL P TFA+SSALKACAR+    GG+SIHGQV KFG
Sbjct: 76  AIRFSTQHGQFKEAFALYVQMQRWGLWPTTFALSSALKACARIAYRMGGLSIHGQVQKFG 135

Query: 188 FCGE---VYVQSALVDFYSKNCDIETSRKVFDEMERKNVVSWNSLLSGYLKNGNLTMAQS 358
           F G    +YV++ALVDFY K  D+E +RK+FDEM  +NVVSWNS+L+GYLK+G+L +AQ 
Sbjct: 136 FSGGGDGIYVETALVDFYCKLGDMEIARKMFDEMAERNVVSWNSMLAGYLKSGDLVVAQR 195

Query: 359 FFDEIPEKDVISYNSMIT 412
            FDEIP+KDVIS+NSMI+
Sbjct: 196 VFDEIPQKDVISWNSMIS 213



 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 31/101 (30%), Positives = 58/101 (57%)
 Frame = +2

Query: 107 SSALKACARVKILRGGMSIHGQVHKFGFCGEVYVQSALVDFYSKNCDIETSRKVFDEMER 286
           +S +   AR   +   +S+  Q+ +  F       +A++  Y +  DI+++R  FD M +
Sbjct: 209 NSMISGYARAGDMEKALSLFQQMPERNFAS----WNAMISGYVEFGDIDSARSFFDAMPQ 264

Query: 287 KNVVSWNSLLSGYLKNGNLTMAQSFFDEIPEKDVISYNSMI 409
           +N VSW +++SGY K G++  A   FD++  KD++ +N+MI
Sbjct: 265 RNNVSWMTMISGYSKCGDVDSACELFDQVGGKDLLLFNAMI 305


>emb|CAN64316.1| hypothetical protein VITISV_027915 [Vitis vinifera]
          Length = 841

 Score =  177 bits (449), Expect = 8e-43
 Identities = 88/138 (63%), Positives = 112/138 (81%), Gaps = 3/138 (2%)
 Frame = +2

Query: 8   SIRFLSENGEYVEAFAQYVGMQRSGLLPNTFAVSSALKACARVKILRGGMSIHGQVHKFG 187
           +IRF +++G++ EAFA YV MQR GL P TFA+SSALKACAR+    GG+SIHGQV KFG
Sbjct: 72  AIRFSTQHGQFKEAFALYVQMQRWGLWPTTFALSSALKACARIAYRMGGLSIHGQVQKFG 131

Query: 188 FCGE---VYVQSALVDFYSKNCDIETSRKVFDEMERKNVVSWNSLLSGYLKNGNLTMAQS 358
           F G    +YV++ALVDFY K  D+E +RK+FDEM  +NVVSWNS+L+GYLK+G+L +AQ 
Sbjct: 132 FSGGGDGIYVETALVDFYCKLGDMEIARKMFDEMAERNVVSWNSMLAGYLKSGDLVVAQR 191

Query: 359 FFDEIPEKDVISYNSMIT 412
            FDEIP+KDVIS+NSMI+
Sbjct: 192 VFDEIPQKDVISWNSMIS 209



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 31/101 (30%), Positives = 57/101 (56%)
 Frame = +2

Query: 107 SSALKACARVKILRGGMSIHGQVHKFGFCGEVYVQSALVDFYSKNCDIETSRKVFDEMER 286
           +S +   AR   +   +S+  Q+ +  F       +A++  Y +  DI+++R  FD M +
Sbjct: 205 NSMISGYARAGDMEKALSLFQQMPERNFAS----WNAMISGYVEFGDIDSARSFFDAMPQ 260

Query: 287 KNVVSWNSLLSGYLKNGNLTMAQSFFDEIPEKDVISYNSMI 409
            N VSW +++SGY K G++  A   FD++  KD++ +N+MI
Sbjct: 261 XNNVSWMTMISGYSKCGDVDSACELFDQVGGKDLLLFNAMI 301


>ref|XP_002270938.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g22760-like [Vitis vinifera]
          Length = 580

 Score =  177 bits (448), Expect = 1e-42
 Identities = 89/138 (64%), Positives = 113/138 (81%), Gaps = 3/138 (2%)
 Frame = +2

Query: 8   SIRFLSENGEYVEAFAQYVGMQRSGLLPNTFAVSSALKACARVKILRGGMSIHGQVHKFG 187
           +IRF +++G++ EAFA YV MQR GL P TFA+SSALKACAR+    GG+SIHGQV KFG
Sbjct: 76  AIRFSTQHGQFKEAFALYVQMQRWGLCPTTFALSSALKACARIAYRMGGISIHGQVQKFG 135

Query: 188 F-CGE--VYVQSALVDFYSKNCDIETSRKVFDEMERKNVVSWNSLLSGYLKNGNLTMAQS 358
           F CG   +YV++ALVDFY K  D+E +RK+FDEM  +NVVSWNS+L+GYLK+G+L +AQ 
Sbjct: 136 FSCGGDGIYVETALVDFYCKLGDMEIARKMFDEMAERNVVSWNSMLAGYLKSGDLVVAQR 195

Query: 359 FFDEIPEKDVISYNSMIT 412
            FDEIP+KDVIS+NSMI+
Sbjct: 196 VFDEIPQKDVISWNSMIS 213



 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 23/72 (31%), Positives = 51/72 (70%)
 Frame = +2

Query: 197 EVYVQSALVDFYSKNCDIETSRKVFDEMERKNVVSWNSLLSGYLKNGNLTMAQSFFDEIP 376
           +V   ++++  Y++  D+E +  +F +M  +N  SWN+++SG+++ G++  A+SFFD +P
Sbjct: 204 DVISWNSMISGYARAGDMEKASSLFQQMPERNFASWNAMISGHVEFGDIDSARSFFDAMP 263

Query: 377 EKDVISYNSMIT 412
           +K+ +S+ +MI+
Sbjct: 264 QKNNVSWMTMIS 275



 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 33/101 (32%), Positives = 56/101 (55%)
 Frame = +2

Query: 107 SSALKACARVKILRGGMSIHGQVHKFGFCGEVYVQSALVDFYSKNCDIETSRKVFDEMER 286
           +S +   AR   +    S+  Q+ +  F     + S  V+F     DI+++R  FD M +
Sbjct: 209 NSMISGYARAGDMEKASSLFQQMPERNFASWNAMISGHVEFG----DIDSARSFFDAMPQ 264

Query: 287 KNVVSWNSLLSGYLKNGNLTMAQSFFDEIPEKDVISYNSMI 409
           KN VSW +++SGY K G++  A   FD++  KD++ +N+MI
Sbjct: 265 KNNVSWMTMISGYSKCGDVDSACELFDQVGGKDLLLFNAMI 305


>ref|XP_004147606.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g22760-like [Cucumis sativus]
           gi|449529850|ref|XP_004171911.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g22760-like [Cucumis sativus]
          Length = 580

 Score =  169 bits (429), Expect = 2e-40
 Identities = 84/135 (62%), Positives = 103/135 (76%)
 Frame = +2

Query: 8   SIRFLSENGEYVEAFAQYVGMQRSGLLPNTFAVSSALKACARVKILRGGMSIHGQVHKFG 187
           ++RF S+NG+++EA A YV MQR GL P+TFAVSS L+AC R+     G  IH QV+K G
Sbjct: 75  AVRFFSQNGQFMEAIAHYVQMQRLGLHPSTFAVSSTLRACGRIMCKFRGWCIHAQVYKLG 134

Query: 188 FCGEVYVQSALVDFYSKNCDIETSRKVFDEMERKNVVSWNSLLSGYLKNGNLTMAQSFFD 367
           FC  VYVQ+ALVDFYSK  D+  ++KVFDEM  KNVVSWNS+LSGY+K GNL  AQ  FD
Sbjct: 135 FCRCVYVQTALVDFYSKLGDMGFAQKVFDEMTEKNVVSWNSILSGYVKIGNLVDAQKLFD 194

Query: 368 EIPEKDVISYNSMIT 412
           E+P KD IS+NSM+T
Sbjct: 195 EMPVKDAISWNSMLT 209


>ref|XP_003609609.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355510664|gb|AES91806.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 576

 Score =  164 bits (416), Expect = 5e-39
 Identities = 84/134 (62%), Positives = 102/134 (76%)
 Frame = +2

Query: 11  IRFLSENGEYVEAFAQYVGMQRSGLLPNTFAVSSALKACARVKILRGGMSIHGQVHKFGF 190
           IRF S+ G++VEA + YV M+R GL P++ AVSS LK+CARV+    G+ IHG VHKFGF
Sbjct: 76  IRFFSQKGQFVEAVSLYVQMRRIGLCPSSHAVSSILKSCARVEDDLCGLLIHGHVHKFGF 135

Query: 191 CGEVYVQSALVDFYSKNCDIETSRKVFDEMERKNVVSWNSLLSGYLKNGNLTMAQSFFDE 370
              VYVQ+AL+D Y K  D+ T+RKVFDEM  KNVVSWNSLLSGY+K GNL   Q FFDE
Sbjct: 136 DACVYVQTALLDLYCKIGDVVTARKVFDEMPDKNVVSWNSLLSGYIKGGNLDEGQRFFDE 195

Query: 371 IPEKDVISYNSMIT 412
           IP KDVIS+N M++
Sbjct: 196 IPLKDVISWNCMVS 209