BLASTX nr result

ID: Bupleurum21_contig00031836 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00031836
         (509 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003612653.1| ATP-dependent DNA helicase PIF1 [Medicago tr...   146   2e-33
ref|XP_003605542.1| Helicase-like protein [Medicago truncatula] ...   146   2e-33
ref|XP_003605523.1| Helicase-like protein [Medicago truncatula] ...   145   3e-33
ref|XP_003605521.1| Helicase-like protein [Medicago truncatula] ...   145   3e-33
ref|XP_003609124.1| ATP-dependent DNA helicase PIF1 [Medicago tr...   145   4e-33

>ref|XP_003612653.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
            gi|355513988|gb|AES95611.1| ATP-dependent DNA helicase
            PIF1 [Medicago truncatula]
          Length = 1427

 Score =  146 bits (369), Expect = 2e-33
 Identities = 72/164 (43%), Positives = 107/164 (65%)
 Frame = +2

Query: 2    GERFYLRMLLGIVRGATSFEDIRTVNGVIYNTYKEACFQHGLLECDDEWHAAIIDASIHQ 181
            GER+YLR+LL IV G TS+E+I+TV GV Y T+KE C   GLL  + EW+ A+ +AS   
Sbjct: 762  GERYYLRILLNIVHGPTSYEEIKTVGGVTYQTFKETCNALGLLNDNKEWNDALNEASQWA 821

Query: 182  TGAQLRELFVTLLLFCDISDVRALWDKHWKTFSDDIEHRQRRNFQSPAFVITDQQLENLT 361
            TG QLRELFVT+LL+ +++D+  LW+ +WKT SDDI +++R  FQ     + D+Q+++  
Sbjct: 822  TGTQLRELFVTILLYGEVADIGKLWETNWKTLSDDIVYKKRILFQHSRLELNDEQIQSYC 881

Query: 362  LYDVDLQLRKRGKTLRDYPTLPKLNQDLQRQSTNTLLYEEHMYD 493
            L ++D  L + G  L D+  +P  N +    + N L+ EE  Y+
Sbjct: 882  LIEIDKILVRAGSYLSDFDGMPLPNSESFEATENRLIVEELSYN 925


>ref|XP_003605542.1| Helicase-like protein [Medicago truncatula]
            gi|355506597|gb|AES87739.1| Helicase-like protein
            [Medicago truncatula]
          Length = 1641

 Score =  146 bits (368), Expect = 2e-33
 Identities = 74/166 (44%), Positives = 107/166 (64%), Gaps = 1/166 (0%)
 Frame = +2

Query: 2    GERFYLRMLLGIVRGATSFEDIRTVNGVIYNTYKEACFQHGLLECDDEWHAAIIDASIHQ 181
            GE+FYLR+LL  V+G   + DI TVNG  +NT+KEACF  GL++ D E+  AI  ASI  
Sbjct: 925  GEKFYLRLLLNFVKGPCCYNDIYTVNGKKFNTFKEACFALGLIDDDKEFLDAITQASIWG 984

Query: 182  TGAQLRELFVTLLLFCDISDVRALWDKHWKTFSDDIEHRQRRNFQSPAFVITDQQLENLT 361
            T + +R LFV LL+    S    +W+K W+  SDD+ HRQRR  + P  V+ D QL++ T
Sbjct: 985  TASYMRRLFVQLLVSNQFSQPEVVWNKTWQNLSDDMLHRQRRAMRVPDLVLDDDQLKSYT 1044

Query: 362  LYDVDLQLRKRGKTLR-DYPTLPKLNQDLQRQSTNTLLYEEHMYDR 496
            L +++  L   GK+L+ DYPT+P+ +  L  +S N L+Y+E  Y++
Sbjct: 1045 LAEIERLLHSHGKSLKEDYPTMPRTDISLIHESRNRLIYDEMNYNQ 1090


>ref|XP_003605523.1| Helicase-like protein [Medicago truncatula]
            gi|355506578|gb|AES87720.1| Helicase-like protein
            [Medicago truncatula]
          Length = 1585

 Score =  145 bits (366), Expect = 3e-33
 Identities = 74/166 (44%), Positives = 107/166 (64%), Gaps = 1/166 (0%)
 Frame = +2

Query: 2    GERFYLRMLLGIVRGATSFEDIRTVNGVIYNTYKEACFQHGLLECDDEWHAAIIDASIHQ 181
            GE+FYLR+LL  V+G   + DI TVNG  +NT+KEACF  GL++ D E+  AI  ASI  
Sbjct: 925  GEKFYLRLLLNFVKGPCCYNDIYTVNGKKFNTFKEACFALGLIDDDKEFIDAINQASIWG 984

Query: 182  TGAQLRELFVTLLLFCDISDVRALWDKHWKTFSDDIEHRQRRNFQSPAFVITDQQLENLT 361
            T + +R LFV LL+    S    +W+K W+  SDD+ HRQRR  + P  V+ D QL++ T
Sbjct: 985  TASYMRHLFVQLLVSNQFSQPEVVWNKTWQNLSDDMLHRQRRAMRVPDLVLDDDQLKSYT 1044

Query: 362  LYDVDLQLRKRGKTLR-DYPTLPKLNQDLQRQSTNTLLYEEHMYDR 496
            L +++  L   GK+L+ DYPT+P+ +  L  +S N L+Y+E  Y++
Sbjct: 1045 LAEIERLLHSHGKSLKEDYPTMPRTDISLIHESRNRLIYDEMNYNQ 1090


>ref|XP_003605521.1| Helicase-like protein [Medicago truncatula]
            gi|355506576|gb|AES87718.1| Helicase-like protein
            [Medicago truncatula]
          Length = 1262

 Score =  145 bits (366), Expect = 3e-33
 Identities = 74/166 (44%), Positives = 107/166 (64%), Gaps = 1/166 (0%)
 Frame = +2

Query: 2    GERFYLRMLLGIVRGATSFEDIRTVNGVIYNTYKEACFQHGLLECDDEWHAAIIDASIHQ 181
            GE+FYLR+LL  V+G   + DI TVNG  +NT+KEACF  GL++ D E+  AI  ASI  
Sbjct: 925  GEKFYLRLLLNFVKGPCCYNDIYTVNGKKFNTFKEACFALGLIDDDKEFIDAINQASIWG 984

Query: 182  TGAQLRELFVTLLLFCDISDVRALWDKHWKTFSDDIEHRQRRNFQSPAFVITDQQLENLT 361
            T + +R LFV LL+    S    +W+K W+  SDD+ HRQRR  + P  V+ D QL++ T
Sbjct: 985  TASYMRHLFVQLLVSNQFSQPEVVWNKTWQNLSDDMLHRQRRAMRVPDLVLDDDQLKSYT 1044

Query: 362  LYDVDLQLRKRGKTLR-DYPTLPKLNQDLQRQSTNTLLYEEHMYDR 496
            L +++  L   GK+L+ DYPT+P+ +  L  +S N L+Y+E  Y++
Sbjct: 1045 LAEIERLLHSHGKSLKEDYPTMPRTDISLIHESRNRLIYDEMNYNQ 1090


>ref|XP_003609124.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
            gi|355510179|gb|AES91321.1| ATP-dependent DNA helicase
            PIF1 [Medicago truncatula]
          Length = 1558

 Score =  145 bits (365), Expect = 4e-33
 Identities = 71/164 (43%), Positives = 107/164 (65%)
 Frame = +2

Query: 2    GERFYLRMLLGIVRGATSFEDIRTVNGVIYNTYKEACFQHGLLECDDEWHAAIIDASIHQ 181
            GE++YLR+LL IV G TS+E+I+TV GV Y T+KE C   GLL  + EW+ A+ +AS   
Sbjct: 762  GEKYYLRILLNIVHGPTSYEEIKTVGGVTYQTFKETCNALGLLNDNREWNDALNEASQWA 821

Query: 182  TGAQLRELFVTLLLFCDISDVRALWDKHWKTFSDDIEHRQRRNFQSPAFVITDQQLENLT 361
            TG QLRELFVT+LL+ +++D+  LW+ +WKT SDDI +++R  FQ     + D+Q+++  
Sbjct: 822  TGTQLRELFVTILLYGEVADIGKLWETNWKTLSDDIVYKKRILFQHSRLELNDEQIQSYC 881

Query: 362  LYDVDLQLRKRGKTLRDYPTLPKLNQDLQRQSTNTLLYEEHMYD 493
            L ++D  L + G  L D+  +P  N +    + N L+ EE  Y+
Sbjct: 882  LIEIDKILVRAGSYLSDFDGMPLPNSESFEATENRLIVEELSYN 925


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