BLASTX nr result
ID: Bupleurum21_contig00031817
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00031817
(1030 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002325283.1| predicted protein [Populus trichocarpa] gi|2... 144 3e-32
emb|CAN82909.1| hypothetical protein VITISV_025072 [Vitis vinifera] 144 3e-32
ref|XP_002863569.1| hypothetical protein ARALYDRAFT_917150 [Arab... 142 1e-31
ref|XP_002870505.1| predicted protein [Arabidopsis lyrata subsp.... 142 2e-31
ref|XP_003634615.1| PREDICTED: TMV resistance protein N-like [Vi... 141 3e-31
>ref|XP_002325283.1| predicted protein [Populus trichocarpa] gi|222862158|gb|EEE99664.1|
predicted protein [Populus trichocarpa]
Length = 601
Score = 144 bits (364), Expect = 3e-32
Identities = 112/361 (31%), Positives = 171/361 (47%), Gaps = 63/361 (17%)
Frame = +3
Query: 3 LYLKDVNLTGSFEQRFEGLTWLRWDCCPLKCLPSEFRPKKLVVLELRESNIKK-WELTKV 179
L +K NL GS+ + L WL W CPLK LPS+F LV+L+++ESN++K W+ TK+
Sbjct: 7 LQIKGANLVGSYSLLPKELIWLCWFGCPLKSLPSDFHLNDLVILDMQESNVRKLWKGTKI 66
Query: 180 FEKLKTLDMSYSINLSTTPDFSKLPCIENLNLEGCTCLEEVNISDESLTKLVSFNLSGCH 359
KLK L++SYS L TP+F +L C+E L L GCT L +V+ S +L LV NL C
Sbjct: 67 LNKLKILNLSYSKYLDETPNFRELSCLERLILTGCTSLVKVHQSIGNLKSLVLLNLHYCD 126
Query: 360 SLEEIHISTGSLMKLVSFNVSGCVKLRSIHDSSCSLRVLRVLDVSGCDKLETLPDQLWKI 539
SL+ + S G+L L + NV+ C +L + +S + L L G ++ LP +
Sbjct: 127 SLKTLPESMGNLKSLQTLNVTQCRQLEKLPESLGDIESLTELFTKG-TAIKQLPTSARYL 185
Query: 540 TSLKKIDIGPPLIVFASP----------FEVFMYSK---SDLTALPSI------------ 644
L K+ G VF SP F +++ + S LP+
Sbjct: 186 KKLTKLSFGGYNKVFYSPDLPSKSRFSRFSLWLSPRNCSSSNAMLPAFFNSFSSLKELNL 245
Query: 645 -------------MSQLLNVEHLVLSGS-----------------------YNLVSIEQL 716
+ L +E L LSG+ NL+SI +L
Sbjct: 246 SYAGLSEATSSIDLGSLSFLEDLDLSGNKFFNLPSGISLLPKLQCLRVEKCSNLLSIPEL 305
Query: 717 PPNVVKIDLYDCMHLERLPNLSNLKQLEKLDLTNCSGLTQIQGLE-GLTSMRELHLEGCN 893
P +V+ + + DC +ER+ ++L L++ C L +IQG+E + L+L GC+
Sbjct: 306 PSSVLFLSINDCTSIERVSAPLQHERLPLLNVKGCRNLIEIQGMECAGNNWSILNLNGCS 365
Query: 894 S 896
+
Sbjct: 366 N 366
>emb|CAN82909.1| hypothetical protein VITISV_025072 [Vitis vinifera]
Length = 1177
Score = 144 bits (364), Expect = 3e-32
Identities = 113/339 (33%), Positives = 164/339 (48%), Gaps = 46/339 (13%)
Frame = +3
Query: 18 VNLTGSFEQRFEGLTWLRWDCCPLKCLPSEFRPKKLVVLELRESNIKK-WELTKVFEKLK 194
++L+ F+ L L W PLK LPS F P+KLV L + S +K+ WE K FEKLK
Sbjct: 602 LHLSRDFKFPSNNLRSLHWHGYPLKSLPSNFHPEKLVELNMCYSLLKQLWEGKKAFEKLK 661
Query: 195 TLDMSYSINLSTTPDFSKLPCIENLNLEGCTCLEEVNISDESLTKLVSFNLSGCHSLE-- 368
+ +S+S +L+ TPDFS P + + L GCT L +++ S +L +L+ NL GC LE
Sbjct: 662 FIKLSHSQHLTKTPDFSAAPKLRRIILNGCTSLVKLHPSIGALKELIFLNLEGCSKLEKF 721
Query: 369 ----------------------EIHISTGSLMKLVSFNVSGCVKLRSIHDSSCSLRVLRV 482
E+ S GSL +LV N+ C KL S+ S C L L+
Sbjct: 722 PEVVQGNLEDLSGISLEGTAIRELPSSIGSLNRLVLLNLRNCEKLASLPQSICELISLQT 781
Query: 483 LDVSGCDKLETLPDQLWKITSLKKIDIGPPLIVFASPFEVFMYSKSDLTALPSIMSQLLN 662
L +SGC KL+ LPD L ++ L ++++ + + + S ++ L N
Sbjct: 782 LTLSGCSKLKKLPDDLGRLQCLVELNV----------------DGTGIKEVTSSINLLTN 825
Query: 663 VEHLVLSG-------SYNLVSIEQLPP------------NVVKIDLYDCMHLE-RLP-NL 779
+E L L+G S NL+S P ++ ++L DC LE LP +L
Sbjct: 826 LEALSLAGCKGGGSKSRNLISFRSSPAAPLQLPFLSGLYSLKSLNLSDCNLLEGALPSDL 885
Query: 780 SNLKQLEKLDLTNCSGLTQIQGLEGLTSMRELHLEGCNS 896
S+L LE L L S +T L L+ +R L LE C S
Sbjct: 886 SSLSSLENLYLDKNSFITLPASLSRLSRLRSLTLEHCKS 924
>ref|XP_002863569.1| hypothetical protein ARALYDRAFT_917150 [Arabidopsis lyrata subsp.
lyrata] gi|297309404|gb|EFH39828.1| hypothetical protein
ARALYDRAFT_917150 [Arabidopsis lyrata subsp. lyrata]
Length = 1177
Score = 142 bits (358), Expect = 1e-31
Identities = 90/290 (31%), Positives = 150/290 (51%), Gaps = 8/290 (2%)
Frame = +3
Query: 57 LTWLRWDCCPLKCLPSEFRPKKLVVLELRESNIKK-WELTKVFEKLKTLDMSYSINLSTT 233
L L W+ PL CLPS+F P+ LV + +R+S ++K WE + LK +D+S+ +NL
Sbjct: 614 LRLLHWERYPLTCLPSKFNPEFLVKINMRDSMLEKLWEGNEPIRNLKWMDLSFCVNLKEL 673
Query: 234 PDFSKLPCIENLNLEGCTCLEEVNISDESLTKLVSFNLSGCHSLEEIHISTGSLMKLVSF 413
PDFS ++ L L C L E+ S ++T L+ +L GC SL ++ S G+L L
Sbjct: 674 PDFSTATNLQELRLVDCLSLVELPSSIGNVTNLLELDLIGCSSLVKLPSSIGNLTNLKKL 733
Query: 414 NVSGCVKLRSIHDSSCSLRVLRVLDVSGCDKLETLPDQLWKITSLKKIDIGPPLIVFASP 593
++ C L + S ++ L+ L++SGC L +P + T+LKK+
Sbjct: 734 YLNRCSSLVQLPSSIGNVTSLKELNLSGCSSLLEIPSSIGNTTNLKKL------------ 781
Query: 594 FEVFMYSKSDLTALPSIMSQLLNVEHLVLSGSYNLVSIEQLPPNVVK------IDLYDCM 755
+ S L LPS + + N+ L L N S+ + P +++K ++L C
Sbjct: 782 ---YADGCSSLVELPSSVGNIANLRELQL---MNCSSLIEFPSSILKLTRLKDLNLSGCS 835
Query: 756 HLERLPNLSNLKQLEKLDLTNCSGLTQIQ-GLEGLTSMRELHLEGCNSSL 902
L +LP++ N+ L+ L L+ CS L ++ +E T+++ L+L GC+ L
Sbjct: 836 SLVKLPSIGNVINLQTLFLSGCSSLVELPFSIENATNLQTLYLNGCSDLL 885
Score = 65.5 bits (158), Expect = 2e-08
Identities = 57/217 (26%), Positives = 94/217 (43%)
Frame = +3
Query: 186 KLKTLDMSYSINLSTTPDFSKLPCIENLNLEGCTCLEEVNISDESLTKLVSFNLSGCHSL 365
+LK L++S +L P + ++ L L GC+ L E+ S E+ T L + L+GC L
Sbjct: 825 RLKDLNLSGCSSLVKLPSIGNVINLQTLFLSGCSSLVELPFSIENATNLQTLYLNGCSDL 884
Query: 366 EEIHISTGSLMKLVSFNVSGCVKLRSIHDSSCSLRVLRVLDVSGCDKLETLPDQLWKITS 545
E+ S ++ L S ++GC L+ + + L+ L + C + LP +W T+
Sbjct: 885 LELPSSIWNITNLQSLYLNGCSSLKELPSLVGNAINLQSLSLMNCSSMVELPSSIWNATN 944
Query: 546 LKKIDIGPPLIVFASPFEVFMYSKSDLTALPSIMSQLLNVEHLVLSGSYNLVSIEQLPPN 725
L +D+ S S L LN++ L L+ LVS +P +
Sbjct: 945 LSYLDVS---------------SCSSLVG--------LNIK-LELNQCRKLVSHPVVPDS 980
Query: 726 VVKIDLYDCMHLERLPNLSNLKQLEKLDLTNCSGLTQ 836
++ +D DC L + S L+ NC L Q
Sbjct: 981 LI-LDAGDCESLVERLDCSFQNPKIVLNFANCFKLNQ 1016
>ref|XP_002870505.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297316341|gb|EFH46764.1| predicted protein
[Arabidopsis lyrata subsp. lyrata]
Length = 1221
Score = 142 bits (357), Expect = 2e-31
Identities = 101/288 (35%), Positives = 147/288 (51%), Gaps = 4/288 (1%)
Frame = +3
Query: 42 QRFEGLTWLRWDCCPLKCLPSEFRPKKLVVLELRESNIKK-WELTKVFEKLKTLDMSYSI 218
Q F L LRW LPS F + LV L + +S ++K WE TK +K + +S S
Sbjct: 498 QYFRKLISLRWMHFQKTSLPSTFNSEFLVELTMHDSKLQKLWEGTKPLRNIKWMVLSNSK 557
Query: 219 NLSTTPDFSKLPCIENLNLEGCTCLEEVNISDESLTKLVSFNLSGCHSLEEIHISTGSLM 398
NL PD S +E L LE C+ L E+ S L+ L L GC SL E+ T ++
Sbjct: 558 NLKELPDLSTATNLETLILENCSSLMELPSSIGKLSNLDYLCLGGCSSLLELPSFTKNVT 617
Query: 399 KLVSFNVSGCVKLRSIHDSSCSLRVLRVLDVSGCDKLETLPDQLWKITSLKKIDIGPPLI 578
LV ++ GC L I S LR+LD+S C L LP + +L+
Sbjct: 618 GLVDLDLRGCSSLVEIPSSIGHAINLRILDLSKCSSLVGLPSFVGNAINLR--------- 668
Query: 579 VFASPFEVFMYSKSDLTALPSIMSQLLNVEHLVLSGSYNLVSIEQL--PPNVVKIDLYDC 752
V++ S+L LPS + L+N+E L LSG +LV + + N+ +DL DC
Sbjct: 669 ------NVYLKGCSNLVELPSSIVDLINLEKLDLSGCSSLVELPCIRNAVNLQMLDLSDC 722
Query: 753 MHLERLPN-LSNLKQLEKLDLTNCSGLTQIQGLEGLTSMRELHLEGCN 893
L +LP+ + N +LEKL+LTNCS L ++ ++ T+++EL LE C+
Sbjct: 723 SSLVKLPSFVGNATKLEKLNLTNCSNLLELPSIDNATNLQELLLENCS 770
Score = 66.6 bits (161), Expect = 9e-09
Identities = 87/328 (26%), Positives = 141/328 (42%), Gaps = 26/328 (7%)
Frame = +3
Query: 75 DCCPLKCLPSEFRPKKLVVLELRESNIKKWELTKVFEKLKTLDMSYSINLSTTPDFSKLP 254
+C L LPS L L L + L K+ L+ INL + K+P
Sbjct: 745 NCSNLLELPSIDNATNLQELLLENCS----RLMKLPSTLRNAINLQLINLKNCSNVVKIP 800
Query: 255 CIEN------LNLEGCTCLEEVNISDESLTKLVSFNLSGCHSLEEIHISTGSLMKLVSFN 416
IEN L+L GC+ L E+ S ++T L L+ C SL E+ S G++ L N
Sbjct: 801 AIENVTNLNLLDLSGCSSLVEIPPSIGTVTSLHKLYLNRCSSLVELPSSIGNITSLQELN 860
Query: 417 VSGCVKLRSIHDSSCSLRVL-----------RVLDVSGCDKLETLPDQLWKITSLKKIDI 563
+ C L ++ S +L L + L +S C KLE LP + + SLK +D
Sbjct: 861 LQDCSNLLALPFSIGNLHKLQELHLSFFFFVKQLHLSRCSKLEVLPINI-NLESLKVLD- 918
Query: 564 GPPLIVFASPFEVFMYSKSDLTALPSIMSQLLNVEHLVLSGSYNLVSIEQLPPNVVKIDL 743
++F + ++F P I + N+ +L L G+ +IE++P ++
Sbjct: 919 ----LIFCTRLKIF----------PEIST---NIVYLNLVGT----TIEEVPLSIRSWPR 957
Query: 744 YDCMHLERLPNLSNLKQLEKLDLTNCSGLT-QIQ----GLEGLTSMRELHLEGCNSSLLT 908
D + NL+ LD+ C L+ IQ ++G++ + ++ L GC L++
Sbjct: 958 LDIFCMSYFENLNEFP--HALDIITCLHLSGDIQEVATWVKGISRLDQILLYGC-KRLVS 1014
Query: 909 YILTKRFFQDLDIKLKFTLK----SFHN 980
DLD + +L+ SFHN
Sbjct: 1015 LPQLPDILSDLDTENCASLEKLDCSFHN 1042
>ref|XP_003634615.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
Length = 1180
Score = 141 bits (355), Expect = 3e-31
Identities = 114/341 (33%), Positives = 165/341 (48%), Gaps = 48/341 (14%)
Frame = +3
Query: 18 VNLTGSFEQRFEGLTWLRWDCCPLKCLPSEFRPKKLVVLELRESNIKK-WELTKVFEKLK 194
++L+ F+ L L W PLK LPS F PKKLV L + S +K+ WE K FEKLK
Sbjct: 601 LHLSRDFKFPSNNLRSLHWHGYPLKSLPSIFHPKKLVELNMCYSLLKQLWEGKKAFEKLK 660
Query: 195 TLDMSYSINLSTTPDFSKLPCIENLNLEGCTCLEEVNISDESLTKLVSFNLSGCHSLE-- 368
+ +S+S +L+ TPDFS P + + L GCT L +++ S +L +L+ NL GC LE
Sbjct: 661 FIKLSHSQHLTKTPDFSAAPKLRRIILNGCTSLVKLHPSIGALKELIFLNLEGCSKLEKF 720
Query: 369 ----------------------EIHISTGSLMKLVSFNVSGCVKLRSIHDSSCSLRVLRV 482
E+ S G L +LV N+ C KL S+ S C L L+
Sbjct: 721 PEVVQGNLEDLSGISLEGTAIRELPSSIGGLNRLVLLNLRNCKKLASLPQSICELISLQT 780
Query: 483 LDVSGCDKLETLPDQLWKITSLKKIDIGPPLIVFASPFEVFMYSKSDLTALPSIMSQLLN 662
L +SGC KL+ LPD L ++ L ++ + + + +PS ++ L N
Sbjct: 781 LTLSGCSKLKKLPDDLGRLQCLVELHV----------------DGTGIKEVPSSINLLTN 824
Query: 663 VEHLVLSG-------SYNLV----SIEQLPP----------NVVKIDLYDCMHLE-RLP- 773
++ L L+G S+NL S L P ++ ++L DC LE LP
Sbjct: 825 LQELSLAGCKGWESKSWNLAFSFGSWPTLEPLRLPRLSGLYSLKILNLSDCNLLEGALPI 884
Query: 774 NLSNLKQLEKLDLTNCSGLTQIQGLEGLTSMRELHLEGCNS 896
+LS+L LE LDL+ S +T L GL+ + L L C S
Sbjct: 885 DLSSLSSLEMLDLSRNSFITIPANLSGLSRLHVLMLPYCKS 925