BLASTX nr result
ID: Bupleurum21_contig00031810
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Bupleurum21_contig00031810 (264 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002302796.1| predicted protein [Populus trichocarpa] gi|2... 50 3e-10 ref|XP_003626029.1| LIM domain and RING finger protein [Medicago... 49 5e-10 dbj|BAJ93864.1| predicted protein [Hordeum vulgare subsp. vulgar... 48 7e-10 ref|XP_003632382.1| PREDICTED: uncharacterized protein LOC100262... 49 2e-09 ref|XP_003520767.1| PREDICTED: uncharacterized protein LOC100799... 48 2e-09 >ref|XP_002302796.1| predicted protein [Populus trichocarpa] gi|222844522|gb|EEE82069.1| predicted protein [Populus trichocarpa] Length = 819 Score = 50.4 bits (119), Expect(2) = 3e-10 Identities = 19/28 (67%), Positives = 24/28 (85%) Frame = +2 Query: 179 QVHFRTDHILCEDEGCLAKKFIVFSNDS 262 ++HFR DH LC+DEGCLAKKFIVF ++ Sbjct: 241 EIHFRRDHFLCDDEGCLAKKFIVFQTEA 268 Score = 38.9 bits (89), Expect(2) = 3e-10 Identities = 14/20 (70%), Positives = 17/20 (85%) Frame = +3 Query: 24 RQHPGHFEYYRNYDELEASF 83 RQHPG +EYY+NYD+LE F Sbjct: 225 RQHPGQYEYYKNYDDLEIHF 244 >ref|XP_003626029.1| LIM domain and RING finger protein [Medicago truncatula] gi|355501044|gb|AES82247.1| LIM domain and RING finger protein [Medicago truncatula] Length = 860 Score = 48.5 bits (114), Expect(2) = 5e-10 Identities = 19/28 (67%), Positives = 23/28 (82%) Frame = +2 Query: 179 QVHFRTDHILCEDEGCLAKKFIVFSNDS 262 ++HFR H LCEDE CLAKKFIVF ++S Sbjct: 242 EIHFRQQHFLCEDEACLAKKFIVFQSES 269 Score = 40.0 bits (92), Expect(2) = 5e-10 Identities = 15/20 (75%), Positives = 17/20 (85%) Frame = +3 Query: 24 RQHPGHFEYYRNYDELEASF 83 RQHPG FEYY+NYD+LE F Sbjct: 226 RQHPGQFEYYKNYDDLEIHF 245 >dbj|BAJ93864.1| predicted protein [Hordeum vulgare subsp. vulgare] gi|326517350|dbj|BAK00042.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 860 Score = 47.8 bits (112), Expect(2) = 7e-10 Identities = 18/28 (64%), Positives = 24/28 (85%) Frame = +2 Query: 179 QVHFRTDHILCEDEGCLAKKFIVFSNDS 262 ++HFR DH LCED+ CLAKKF+VF +D+ Sbjct: 245 EMHFRKDHFLCEDDVCLAKKFVVFQSDA 272 Score = 40.4 bits (93), Expect(2) = 7e-10 Identities = 14/20 (70%), Positives = 18/20 (90%) Frame = +3 Query: 24 RQHPGHFEYYRNYDELEASF 83 RQHPGH++Y+RNYD+LE F Sbjct: 229 RQHPGHYDYFRNYDDLEMHF 248 >ref|XP_003632382.1| PREDICTED: uncharacterized protein LOC100262296 [Vitis vinifera] Length = 842 Score = 49.3 bits (116), Expect(2) = 2e-09 Identities = 18/28 (64%), Positives = 24/28 (85%) Frame = +2 Query: 179 QVHFRTDHILCEDEGCLAKKFIVFSNDS 262 ++HFR DH LCEDE CLAKKF+VF +++ Sbjct: 243 EIHFRRDHFLCEDEACLAKKFVVFQSEA 270 Score = 37.4 bits (85), Expect(2) = 2e-09 Identities = 14/20 (70%), Positives = 17/20 (85%) Frame = +3 Query: 24 RQHPGHFEYYRNYDELEASF 83 RQ+PG FEYY+NYD+LE F Sbjct: 227 RQNPGQFEYYKNYDDLEIHF 246 >ref|XP_003520767.1| PREDICTED: uncharacterized protein LOC100799878 [Glycine max] Length = 832 Score = 47.8 bits (112), Expect(2) = 2e-09 Identities = 17/28 (60%), Positives = 24/28 (85%) Frame = +2 Query: 179 QVHFRTDHILCEDEGCLAKKFIVFSNDS 262 ++HFR +H LCEDE CLAKKF+VF +++ Sbjct: 244 EIHFRQEHFLCEDEACLAKKFVVFQSEA 271 Score = 38.9 bits (89), Expect(2) = 2e-09 Identities = 14/20 (70%), Positives = 17/20 (85%) Frame = +3 Query: 24 RQHPGHFEYYRNYDELEASF 83 RQHPG +EYY+NYD+LE F Sbjct: 228 RQHPGQYEYYKNYDDLEIHF 247