BLASTX nr result

ID: Bupleurum21_contig00031810 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00031810
         (264 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302796.1| predicted protein [Populus trichocarpa] gi|2...    50   3e-10
ref|XP_003626029.1| LIM domain and RING finger protein [Medicago...    49   5e-10
dbj|BAJ93864.1| predicted protein [Hordeum vulgare subsp. vulgar...    48   7e-10
ref|XP_003632382.1| PREDICTED: uncharacterized protein LOC100262...    49   2e-09
ref|XP_003520767.1| PREDICTED: uncharacterized protein LOC100799...    48   2e-09

>ref|XP_002302796.1| predicted protein [Populus trichocarpa] gi|222844522|gb|EEE82069.1|
           predicted protein [Populus trichocarpa]
          Length = 819

 Score = 50.4 bits (119), Expect(2) = 3e-10
 Identities = 19/28 (67%), Positives = 24/28 (85%)
 Frame = +2

Query: 179 QVHFRTDHILCEDEGCLAKKFIVFSNDS 262
           ++HFR DH LC+DEGCLAKKFIVF  ++
Sbjct: 241 EIHFRRDHFLCDDEGCLAKKFIVFQTEA 268



 Score = 38.9 bits (89), Expect(2) = 3e-10
 Identities = 14/20 (70%), Positives = 17/20 (85%)
 Frame = +3

Query: 24  RQHPGHFEYYRNYDELEASF 83
           RQHPG +EYY+NYD+LE  F
Sbjct: 225 RQHPGQYEYYKNYDDLEIHF 244


>ref|XP_003626029.1| LIM domain and RING finger protein [Medicago truncatula]
           gi|355501044|gb|AES82247.1| LIM domain and RING finger
           protein [Medicago truncatula]
          Length = 860

 Score = 48.5 bits (114), Expect(2) = 5e-10
 Identities = 19/28 (67%), Positives = 23/28 (82%)
 Frame = +2

Query: 179 QVHFRTDHILCEDEGCLAKKFIVFSNDS 262
           ++HFR  H LCEDE CLAKKFIVF ++S
Sbjct: 242 EIHFRQQHFLCEDEACLAKKFIVFQSES 269



 Score = 40.0 bits (92), Expect(2) = 5e-10
 Identities = 15/20 (75%), Positives = 17/20 (85%)
 Frame = +3

Query: 24  RQHPGHFEYYRNYDELEASF 83
           RQHPG FEYY+NYD+LE  F
Sbjct: 226 RQHPGQFEYYKNYDDLEIHF 245


>dbj|BAJ93864.1| predicted protein [Hordeum vulgare subsp. vulgare]
           gi|326517350|dbj|BAK00042.1| predicted protein [Hordeum
           vulgare subsp. vulgare]
          Length = 860

 Score = 47.8 bits (112), Expect(2) = 7e-10
 Identities = 18/28 (64%), Positives = 24/28 (85%)
 Frame = +2

Query: 179 QVHFRTDHILCEDEGCLAKKFIVFSNDS 262
           ++HFR DH LCED+ CLAKKF+VF +D+
Sbjct: 245 EMHFRKDHFLCEDDVCLAKKFVVFQSDA 272



 Score = 40.4 bits (93), Expect(2) = 7e-10
 Identities = 14/20 (70%), Positives = 18/20 (90%)
 Frame = +3

Query: 24  RQHPGHFEYYRNYDELEASF 83
           RQHPGH++Y+RNYD+LE  F
Sbjct: 229 RQHPGHYDYFRNYDDLEMHF 248


>ref|XP_003632382.1| PREDICTED: uncharacterized protein LOC100262296 [Vitis vinifera]
          Length = 842

 Score = 49.3 bits (116), Expect(2) = 2e-09
 Identities = 18/28 (64%), Positives = 24/28 (85%)
 Frame = +2

Query: 179 QVHFRTDHILCEDEGCLAKKFIVFSNDS 262
           ++HFR DH LCEDE CLAKKF+VF +++
Sbjct: 243 EIHFRRDHFLCEDEACLAKKFVVFQSEA 270



 Score = 37.4 bits (85), Expect(2) = 2e-09
 Identities = 14/20 (70%), Positives = 17/20 (85%)
 Frame = +3

Query: 24  RQHPGHFEYYRNYDELEASF 83
           RQ+PG FEYY+NYD+LE  F
Sbjct: 227 RQNPGQFEYYKNYDDLEIHF 246


>ref|XP_003520767.1| PREDICTED: uncharacterized protein LOC100799878 [Glycine max]
          Length = 832

 Score = 47.8 bits (112), Expect(2) = 2e-09
 Identities = 17/28 (60%), Positives = 24/28 (85%)
 Frame = +2

Query: 179 QVHFRTDHILCEDEGCLAKKFIVFSNDS 262
           ++HFR +H LCEDE CLAKKF+VF +++
Sbjct: 244 EIHFRQEHFLCEDEACLAKKFVVFQSEA 271



 Score = 38.9 bits (89), Expect(2) = 2e-09
 Identities = 14/20 (70%), Positives = 17/20 (85%)
 Frame = +3

Query: 24  RQHPGHFEYYRNYDELEASF 83
           RQHPG +EYY+NYD+LE  F
Sbjct: 228 RQHPGQYEYYKNYDDLEIHF 247


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