BLASTX nr result

ID: Bupleurum21_contig00031772 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00031772
         (631 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002327524.1| predicted protein [Populus trichocarpa] gi|2...   207   2e-51
ref|XP_003541477.1| PREDICTED: uncharacterized protein LOC100800...   198   6e-49
ref|XP_003550816.1| PREDICTED: uncharacterized protein LOC100783...   196   4e-48
emb|CBI36351.3| unnamed protein product [Vitis vinifera]              193   2e-47
emb|CAN81954.1| hypothetical protein VITISV_014020 [Vitis vinifera]   193   3e-47

>ref|XP_002327524.1| predicted protein [Populus trichocarpa] gi|222836078|gb|EEE74499.1|
           predicted protein [Populus trichocarpa]
          Length = 635

 Score =  207 bits (526), Expect = 2e-51
 Identities = 105/180 (58%), Positives = 127/180 (70%), Gaps = 2/180 (1%)
 Frame = -1

Query: 631 LVHFTFRKIYGEDAVTWMKVVEDCVHELFVEYIVLSLPPPTFLVEDHEGVKTEMSPDD-- 458
           L+ F+F K++GEDA  W+K V+D +HEL V Y+  +   P   VE  EG+  E+   D  
Sbjct: 458 LLEFSFPKVFGEDAGMWIKSVDDGIHELLVGYLTPNFHLPATDVE--EGLPQELHTQDLP 515

Query: 457 EISAGDDLLDFDIYISEMAGSQHMKSELDHYLEEPLMPRIQEFDVLNWWKEKAQKYPTLS 278
            +S GD L DFDIYISE+   QH KSELD YLEE L+PR+ EFDVL WWK    KYPTLS
Sbjct: 516 MLSIGDGLSDFDIYISEITSGQHFKSELDQYLEESLLPRVHEFDVLGWWKLNRLKYPTLS 575

Query: 277 KMACDILSIPVSTVAPESVFDTVTKKMDSYRCSLKPFTVEVLICAKDWLQYGXXXX*NPS 98
           KMA DILSIPVSTV P+SVFDT  K++DSYR SL+P T+E LICAKDWLQ+G     +PS
Sbjct: 576 KMAVDILSIPVSTVTPDSVFDTENKRIDSYRSSLRPVTLEALICAKDWLQHGSSLLSSPS 635


>ref|XP_003541477.1| PREDICTED: uncharacterized protein LOC100800468 [Glycine max]
          Length = 1100

 Score =  198 bits (504), Expect = 6e-49
 Identities = 102/179 (56%), Positives = 126/179 (70%), Gaps = 3/179 (1%)
 Frame = -1

Query: 631  LVHFTFRKIYGEDAVTWMKVVEDCVHELFVEYIVLSLP-PPTFLVEDHEG--VKTEMSPD 461
            LV F+F KIYGEDA  ++K+V+D +HELF EY+ L LP  P +  E + G   KT  SP 
Sbjct: 916  LVEFSFTKIYGEDAHEYVKIVDDGIHELFHEYVTLPLPLTPAYAEEGNPGNHPKTGGSPG 975

Query: 460  DEISAGDDLLDFDIYISEMAGSQHMKSELDHYLEEPLMPRIQEFDVLNWWKEKAQKYPTL 281
              + + + L DFD+YI E +  Q MKSELD YLEE L+PR+ +FDVL WWK    KYPTL
Sbjct: 976  GTMMSDNGLTDFDVYIMETSNHQ-MKSELDQYLEESLLPRVPDFDVLGWWKLNKLKYPTL 1034

Query: 280  SKMACDILSIPVSTVAPESVFDTVTKKMDSYRCSLKPFTVEVLICAKDWLQYGXXXX*N 104
            SKMA DILS+PVS++ PESVFDT  K+MD YR SL+P TVE L+CAKDW+QYG     N
Sbjct: 1035 SKMARDILSVPVSSLPPESVFDTKVKEMDQYRSSLRPETVEALVCAKDWMQYGAAEASN 1093


>ref|XP_003550816.1| PREDICTED: uncharacterized protein LOC100783258 [Glycine max]
          Length = 1154

 Score =  196 bits (497), Expect = 4e-48
 Identities = 100/179 (55%), Positives = 124/179 (69%), Gaps = 3/179 (1%)
 Frame = -1

Query: 631  LVHFTFRKIYGEDAVTWMKVVEDCVHELFVEYIVLSLP-PPTFLVEDHEGV--KTEMSPD 461
            LV F+F KIYGEDA  ++K+V+D +HELF EY+ L LP  P +  E + G   +   SP 
Sbjct: 970  LVEFSFTKIYGEDAHEYVKIVDDGIHELFHEYVALPLPLTPAYAEEGNAGSHPRAGESPG 1029

Query: 460  DEISAGDDLLDFDIYISEMAGSQHMKSELDHYLEEPLMPRIQEFDVLNWWKEKAQKYPTL 281
              +   + L DFD+YI E +  Q MKSELD YLEE L+PR+ +FDVL WWK    KYPTL
Sbjct: 1030 GTLMPDNGLTDFDVYIMETSSHQ-MKSELDQYLEESLLPRVPDFDVLGWWKLNKLKYPTL 1088

Query: 280  SKMACDILSIPVSTVAPESVFDTVTKKMDSYRCSLKPFTVEVLICAKDWLQYGXXXX*N 104
            SKMA DILS+PVS+V PESVFDT  K+MD YR SL+P TVE ++CAKDW+QYG     N
Sbjct: 1089 SKMARDILSVPVSSVPPESVFDTKVKEMDQYRSSLRPETVEAIVCAKDWMQYGAAEASN 1147


>emb|CBI36351.3| unnamed protein product [Vitis vinifera]
          Length = 295

 Score =  193 bits (491), Expect = 2e-47
 Identities = 101/187 (54%), Positives = 132/187 (70%), Gaps = 17/187 (9%)
 Frame = -1

Query: 631 LVHFTFRKIYGEDAVTWMKVVEDCVHELFVEYI----VLSLPPP-----------TFLVE 497
           LV F+F KIYG +A  W+K+V++ + ELFV+Y+    +LS+ P            T++ E
Sbjct: 93  LVEFSFSKIYGAEAEMWIKIVDEGIRELFVDYVTQPPLLSIQPAYVEEGTEVISQTYMEE 152

Query: 496 DHEGV-KTEMSPDDEI-SAGDDLLDFDIYISEMAGSQHMKSELDHYLEEPLMPRIQEFDV 323
             E + KTEM+    + S  D L DFD+YISE++G Q M+SELD YL+E LMPR Q+FDV
Sbjct: 153 GTEVIPKTEMTDGGPLLSDSDRLSDFDVYISEISGGQDMRSELDQYLDESLMPRSQDFDV 212

Query: 322 LNWWKEKAQKYPTLSKMACDILSIPVSTVAPESVFDTVTKKMDSYRCSLKPFTVEVLICA 143
           L WWK    KYPTLS+MA DILSIP++TV P++VFDTV +K+DSYR SL+P T+E LICA
Sbjct: 213 LAWWKLNKLKYPTLSRMASDILSIPITTVGPDNVFDTVGRKIDSYRSSLRPLTLEALICA 272

Query: 142 KDWLQYG 122
           KDWLQ G
Sbjct: 273 KDWLQNG 279


>emb|CAN81954.1| hypothetical protein VITISV_014020 [Vitis vinifera]
          Length = 1045

 Score =  193 bits (490), Expect = 3e-47
 Identities = 101/187 (54%), Positives = 132/187 (70%), Gaps = 17/187 (9%)
 Frame = -1

Query: 631  LVHFTFRKIYGEDAVTWMKVVEDCVHELFVEYI----VLSLPPP-----------TFLVE 497
            LV F+F KIYG +A  W+K+V++ + ELFV+Y+    +LS+ P            T++ E
Sbjct: 843  LVEFSFSKIYGAEAEMWIKIVDEGIRELFVDYVTQPPLLSIQPAYVEEGTEVISQTYMEE 902

Query: 496  DHEGV-KTEMSPDDEI-SAGDDLLDFDIYISEMAGSQHMKSELDHYLEEPLMPRIQEFDV 323
              E + KTEM+    + S  D L DFD+YISE++G Q M+SELD YL+E LMPR Q+FDV
Sbjct: 903  GTEVIPKTEMTDGGPLLSDSDRLSDFDVYISEISGGQDMRSELDQYLDESLMPRSQDFDV 962

Query: 322  LNWWKEKAQKYPTLSKMACDILSIPVSTVAPESVFDTVTKKMDSYRCSLKPFTVEVLICA 143
            L WWK    KYPTLS+MA DILSIP++TV P++VFDTV +K+DSYR SL+P T+E LICA
Sbjct: 963  LAWWKLNKLKYPTLSRMASDILSIPITTVGPDNVFDTVGRKIDSYRSSLRPVTLEALICA 1022

Query: 142  KDWLQYG 122
            KDWLQ G
Sbjct: 1023 KDWLQNG 1029


Top