BLASTX nr result

ID: Bupleurum21_contig00031737 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00031737
         (389 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37563.3| unnamed protein product [Vitis vinifera]              195   3e-48
ref|XP_002275240.1| PREDICTED: uncharacterized protein LOC100248...   195   3e-48
ref|XP_002310513.1| predicted protein [Populus trichocarpa] gi|2...   184   5e-45
gb|AAX33317.1| secondary cell wall-related glycosyltransferase f...   183   1e-44
ref|XP_002517237.1| glycogenin, putative [Ricinus communis] gi|2...   181   5e-44

>emb|CBI37563.3| unnamed protein product [Vitis vinifera]
          Length = 568

 Score =  195 bits (496), Expect = 3e-48
 Identities = 83/125 (66%), Positives = 103/125 (82%)
 Frame = +2

Query: 14  LSRWIWGESDPRYMSHEDVNWQEVSNVIEEIPNRHELQGVGMLNFNSTENNIWKQFLPNA 193
           ++RWIWG SDPRY+S  DVNW ++S VI+++ + ++ QG+G+LNFN TE N WKQ +P  
Sbjct: 89  VNRWIWGGSDPRYISDLDVNWDDISKVIDQLVDMNQYQGIGLLNFNKTEVNNWKQLIPQT 148

Query: 194 KHINLHLDYAEENVTWNMLYPEWIDEEQEEEVPSCPSLPKLQVPRKRLDLIVVKLPCRNE 373
            HI LHLDYAE+NVTW+ LYPEWIDEE+E+EVP CP LPKL+ P+KRLDLI VKLPCRNE
Sbjct: 149 SHIVLHLDYAEKNVTWDTLYPEWIDEEEEDEVPICPLLPKLEAPKKRLDLIAVKLPCRNE 208

Query: 374 ANWSR 388
            NWSR
Sbjct: 209 GNWSR 213


>ref|XP_002275240.1| PREDICTED: uncharacterized protein LOC100248912 [Vitis vinifera]
          Length = 636

 Score =  195 bits (496), Expect = 3e-48
 Identities = 83/125 (66%), Positives = 103/125 (82%)
 Frame = +2

Query: 14  LSRWIWGESDPRYMSHEDVNWQEVSNVIEEIPNRHELQGVGMLNFNSTENNIWKQFLPNA 193
           ++RWIWG SDPRY+S  DVNW ++S VI+++ + ++ QG+G+LNFN TE N WKQ +P  
Sbjct: 89  VNRWIWGGSDPRYISDLDVNWDDISKVIDQLVDMNQYQGIGLLNFNKTEVNNWKQLIPQT 148

Query: 194 KHINLHLDYAEENVTWNMLYPEWIDEEQEEEVPSCPSLPKLQVPRKRLDLIVVKLPCRNE 373
            HI LHLDYAE+NVTW+ LYPEWIDEE+E+EVP CP LPKL+ P+KRLDLI VKLPCRNE
Sbjct: 149 SHIVLHLDYAEKNVTWDTLYPEWIDEEEEDEVPICPLLPKLEAPKKRLDLIAVKLPCRNE 208

Query: 374 ANWSR 388
            NWSR
Sbjct: 209 GNWSR 213


>ref|XP_002310513.1| predicted protein [Populus trichocarpa] gi|222853416|gb|EEE90963.1|
           predicted protein [Populus trichocarpa]
          Length = 630

 Score =  184 bits (468), Expect = 5e-45
 Identities = 83/129 (64%), Positives = 101/129 (78%)
 Frame = +2

Query: 2   LSDSLSRWIWGESDPRYMSHEDVNWQEVSNVIEEIPNRHELQGVGMLNFNSTENNIWKQF 181
           LS S SRWIWG SDPRY+S  DVNW +V  VIE++  +++ QG+G+LNFN +E   W Q 
Sbjct: 78  LSHSGSRWIWGGSDPRYVSDLDVNWDDVMKVIEKLGEQNDYQGIGLLNFNDSEVYHWNQL 137

Query: 182 LPNAKHINLHLDYAEENVTWNMLYPEWIDEEQEEEVPSCPSLPKLQVPRKRLDLIVVKLP 361
            P+A  +N+ LDYA++N+TW+ LYPEWIDEEQE+EVP CPSLPK   PRKRLDLI VKLP
Sbjct: 138 TPDATLVNIQLDYADKNMTWDSLYPEWIDEEQEKEVPVCPSLPKPDTPRKRLDLIAVKLP 197

Query: 362 CRNEANWSR 388
           CRNE NWSR
Sbjct: 198 CRNEWNWSR 206


>gb|AAX33317.1| secondary cell wall-related glycosyltransferase family 8 [Populus
           tremula x Populus tremuloides]
          Length = 636

 Score =  183 bits (464), Expect = 1e-44
 Identities = 79/125 (63%), Positives = 99/125 (79%)
 Frame = +2

Query: 14  LSRWIWGESDPRYMSHEDVNWQEVSNVIEEIPNRHELQGVGMLNFNSTENNIWKQFLPNA 193
           ++RWIWG SDPRY+S  DV W +V  VIE++  +++ QG+G+LNFN +E   W Q  P+A
Sbjct: 88  VNRWIWGGSDPRYVSDLDVKWDDVMKVIEKLGEQNDYQGIGLLNFNDSEVYNWNQLTPDA 147

Query: 194 KHINLHLDYAEENVTWNMLYPEWIDEEQEEEVPSCPSLPKLQVPRKRLDLIVVKLPCRNE 373
            H+N+ LDYA++N+TW+ LYPEWIDEEQE+EVP CPSLPK   PRKRLDLI VKLPCRNE
Sbjct: 148 THVNIQLDYADKNMTWDSLYPEWIDEEQEKEVPVCPSLPKPDTPRKRLDLIAVKLPCRNE 207

Query: 374 ANWSR 388
            NWSR
Sbjct: 208 WNWSR 212


>ref|XP_002517237.1| glycogenin, putative [Ricinus communis] gi|223543608|gb|EEF45137.1|
           glycogenin, putative [Ricinus communis]
          Length = 630

 Score =  181 bits (459), Expect = 5e-44
 Identities = 81/129 (62%), Positives = 98/129 (75%)
 Frame = +2

Query: 2   LSDSLSRWIWGESDPRYMSHEDVNWQEVSNVIEEIPNRHELQGVGMLNFNSTENNIWKQF 181
           LS S SRWIWG SDPRY+S  DVNW +V  VIE++  +++ +G+G+LNFN++E   WK  
Sbjct: 82  LSHSGSRWIWGGSDPRYVSDIDVNWDDVMKVIEKLSEQNDYRGIGLLNFNTSEVTYWKHL 141

Query: 182 LPNAKHINLHLDYAEENVTWNMLYPEWIDEEQEEEVPSCPSLPKLQVPRKRLDLIVVKLP 361
           LP+     L LDY + N+TW  LYPEWIDEEQE+EVP CPSLPK  VPRKRLD+I VKLP
Sbjct: 142 LPDVIPHVLQLDYVDRNITWESLYPEWIDEEQEKEVPVCPSLPKADVPRKRLDIIAVKLP 201

Query: 362 CRNEANWSR 388
           CRNE NWSR
Sbjct: 202 CRNELNWSR 210


Top