BLASTX nr result

ID: Bupleurum21_contig00031735 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00031735
         (475 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002304464.1| predicted protein [Populus trichocarpa] gi|2...   116   2e-24
ref|XP_002298068.1| predicted protein [Populus trichocarpa] gi|2...   100   9e-20
emb|CAN60407.1| hypothetical protein VITISV_008798 [Vitis vinifera]    97   1e-18
ref|XP_002509701.1| conserved hypothetical protein [Ricinus comm...    94   9e-18
ref|XP_002302558.1| predicted protein [Populus trichocarpa] gi|2...    76   3e-12

>ref|XP_002304464.1| predicted protein [Populus trichocarpa] gi|222841896|gb|EEE79443.1|
           predicted protein [Populus trichocarpa]
          Length = 303

 Score =  116 bits (290), Expect = 2e-24
 Identities = 62/159 (38%), Positives = 100/159 (62%), Gaps = 14/159 (8%)
 Frame = -1

Query: 475 AECDNESVGSP-----LCIQEDV-ISYNLADDDNKTRKKSEELLEQIKAKTPSMRLNVNS 314
           AE  +ES+ SP     + I+ D   +++ A ++N T K ++ELL+Q+K+   S  L+   
Sbjct: 141 AELGDESLESPVQHCSMSIKSDNNANFSEAKEENGTEKHAQELLKQVKSTIASHSLSSKL 200

Query: 313 DNLFLDFFLEATTEDNSISDCELLY--------VAKDWMNGQPQEVVLGWEVQKNREAYI 158
           D+L +DFF E   E+N+I     LY        VA+DW+NGQP E+ LGWEV ++R AY+
Sbjct: 201 DSLLVDFFTEKIVENNAIGSVIGLYKEFEQELGVAQDWINGQPTEMFLGWEVVESRHAYL 260

Query: 157 REMESGGMWGKLDQDIQEIAIELEADIFTTLLNDLLLGF 41
           ++ME  G W  +DQ+ +E A+ELE ++F +L+++ LL +
Sbjct: 261 KDMEKNGKWKNVDQEKEEFALELEVEVFNSLVDEALLDY 299


>ref|XP_002298068.1| predicted protein [Populus trichocarpa] gi|222845326|gb|EEE82873.1|
           predicted protein [Populus trichocarpa]
          Length = 471

 Score =  100 bits (250), Expect = 9e-20
 Identities = 59/160 (36%), Positives = 96/160 (60%), Gaps = 15/160 (9%)
 Frame = -1

Query: 475 AECDNESVGSPLCIQEDVISYNLADD-------DNKTRKKSEELLEQIKAKTPSMRLNVN 317
           AE ++ES+ SP  +Q   +S +  +D       +N T K ++ELL+ +K+ T    L   
Sbjct: 313 AELEDESLESP--VQHCSVSIHSDNDNDFKETKENGTEKHAQELLKHVKSTTS---LASK 367

Query: 316 SDNLFLDFFLEATTED-------NSISDCEL-LYVAKDWMNGQPQEVVLGWEVQKNREAY 161
            D+L LDFF E   E+        S  + E  L VA++W++GQPQE+ LGWE+ + R  Y
Sbjct: 368 VDSLLLDFFKEKIVENYAGGSMVGSYKEFEQELRVAQEWIDGQPQEMFLGWEMVERRHVY 427

Query: 160 IREMESGGMWGKLDQDIQEIAIELEADIFTTLLNDLLLGF 41
           ++ ME  G W  +DQ  +E+A+ELEA++F +L++++LL +
Sbjct: 428 VKHMEKSGKWENVDQGKEEVALELEAEVFNSLVDEVLLDY 467


>emb|CAN60407.1| hypothetical protein VITISV_008798 [Vitis vinifera]
          Length = 520

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 49/121 (40%), Positives = 79/121 (65%), Gaps = 5/121 (4%)
 Frame = -1

Query: 400 DDNKTRKKSEELLEQIKAKTPSMRLNVNSDNLFLDFFLEATTE--DNSISD---CELLYV 236
           ++  T ++++ LL+ IKA+ PS     N+  L LDFF E   E  +N  +D    ELL V
Sbjct: 393 EEMTTERQAQNLLKLIKAEVPSDSSKFNAXTLLLDFFKERIMERHENPNADEFNQELLRV 452

Query: 235 AKDWMNGQPQEVVLGWEVQKNREAYIREMESGGMWGKLDQDIQEIAIELEADIFTTLLND 56
            +DWM+G  ++ +LGWEVQ +R+AYI++ME  G W KL+++ +E+A E++ +  T LLN+
Sbjct: 453 TEDWMSGHHRDXLLGWEVQNHRKAYIKDMEERGKWRKLEEEKEEVAAEVZXEXLTYLLNE 512

Query: 55  L 53
           +
Sbjct: 513 M 513


>ref|XP_002509701.1| conserved hypothetical protein [Ricinus communis]
           gi|223549600|gb|EEF51088.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 447

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 53/148 (35%), Positives = 88/148 (59%), Gaps = 9/148 (6%)
 Frame = -1

Query: 466 DNESVGSPLCIQEDVISYNLADDDNKTRKKSEELLEQIKAKTPSMR-LNVNSDNLFLDFF 290
           D+ES+ S   IQ   +S ++ ++      +++ELLE +K   PS   L  N++++ LDFF
Sbjct: 303 DDESIKST--IQTRSLSIDVKEE------RAQELLELVKTTLPSSNSLISNAESVLLDFF 354

Query: 289 LEATTEDNSISDC--------ELLYVAKDWMNGQPQEVVLGWEVQKNREAYIREMESGGM 134
            E   E+N+ S          + L   +DW+NG PQE+ LGWEV+++R  Y++EME    
Sbjct: 355 REKILENNASSSMVKGSKEFKQELEAIQDWLNGNPQEMFLGWEVKESRHIYVKEMEKSRK 414

Query: 133 WGKLDQDIQEIAIELEADIFTTLLNDLL 50
           W  L ++ +E+ +E E +IFT+L+N+ L
Sbjct: 415 WRNLSEEKEELILEFELEIFTSLVNEAL 442


>ref|XP_002302558.1| predicted protein [Populus trichocarpa] gi|222844284|gb|EEE81831.1|
           predicted protein [Populus trichocarpa]
          Length = 473

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 48/125 (38%), Positives = 73/125 (58%), Gaps = 6/125 (4%)
 Frame = -1

Query: 403 DDDNKTRKKSEELLEQIKAKTPSMRLNVNSDNLFLDFFLEAT------TEDNSISDCELL 242
           ++ NK  +K+ +LL  +K +T     N N D L L+FF +        T  N I D ELL
Sbjct: 348 EEINKVEEKAWKLLNHVK-ETGVECCNDNVD-LLLNFFRDELATGRYETRKNGI-DVELL 404

Query: 241 YVAKDWMNGQPQEVVLGWEVQKNREAYIREMESGGMWGKLDQDIQEIAIELEADIFTTLL 62
             AK W+NG+   + +GWE+   RE Y+REM+  G W K +++ QE+A+E+E  +   L+
Sbjct: 405 NKAKAWINGE-DSLWVGWEIVNKREDYVREMDREGRWKKFEEEQQELALEIENGVLRLLV 463

Query: 61  NDLLL 47
           +DLLL
Sbjct: 464 DDLLL 468


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