BLASTX nr result

ID: Bupleurum21_contig00031733 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00031733
         (378 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30073.3| unnamed protein product [Vitis vinifera]               58   9e-07
gb|AAL48201.1|AF378084_1 PNCBP [Solanum tuberosum]                     58   9e-07

>emb|CBI30073.3| unnamed protein product [Vitis vinifera]
          Length = 1379

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 37/91 (40%), Positives = 52/91 (57%), Gaps = 2/91 (2%)
 Frame = +3

Query: 90  QDIS--NSDFADRAQDIQVLELRKVFAIKLVREAIEKILLPEVEGQTSDVISITSENVSD 263
           QD S  N D  D   D Q +EL ++ AI+LV EAI+ ILLPE +   SD  S+TS+  SD
Sbjct: 572 QDFSETNPDMEDNGADCQKIELCQIDAIRLVEEAIDGILLPETQDNLSDDHSVTSDTNSD 631

Query: 264 EEHPAEQSHDEGEEKGSTTSNKFAELQSQET 356
           +E  +E +H + +E+    S K   L+   T
Sbjct: 632 QE-ISETNHGKDKERNIPASPKQTLLKHDNT 661


>gb|AAL48201.1|AF378084_1 PNCBP [Solanum tuberosum]
          Length = 1309

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 40/83 (48%), Positives = 52/83 (62%), Gaps = 11/83 (13%)
 Frame = +3

Query: 99  SNSDFADRAQ-------DIQVLELRKVFAIKLVREAIEKILLPEVEGQTSDVISITSENV 257
           S SDFA+R         + Q +ELRK+F IKLVREAIEKILLPEV+   SD  S+TSE+ 
Sbjct: 637 SCSDFAEREMIPANEDAESQEIELRKLFTIKLVREAIEKILLPEVQ---SDNQSVTSESS 693

Query: 258 SDEE----HPAEQSHDEGEEKGS 314
            D+E    +  + S +E  + GS
Sbjct: 694 VDQESFEMNQIQDSKNEEVDAGS 716


Top