BLASTX nr result

ID: Bupleurum21_contig00031713 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00031713
         (402 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273990.1| PREDICTED: two-component response regulator ...    73   3e-11
emb|CBX43988.1| putative A-type response regulator 6 [Populus x ...    70   2e-10
ref|XP_002322625.1| type-a response regulator [Populus trichocar...    67   1e-09
ref|XP_002532588.1| two-component system sensor histidine kinase...    67   2e-09
ref|XP_002307983.1| type-a response regulator [Populus trichocar...    66   3e-09

>ref|XP_002273990.1| PREDICTED: two-component response regulator ARR9 [Vitis vinifera]
          Length = 218

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 46/95 (48%), Positives = 58/95 (61%), Gaps = 4/95 (4%)
 Frame = -2

Query: 401 LKPVRLTDVNKLKPHMLKTKDKDSEKLEKETQQIQ----GXXXXXXXXXXXXQKAAAATQ 234
           LKPV+++DVN+LKPHM+K K KD ++  +E Q+ Q                 Q+     Q
Sbjct: 127 LKPVQISDVNRLKPHMMKAKSKDQQQENEEKQEKQEEESKETEKSEPESQQPQQQQQQQQ 186

Query: 233 QQVIGNNNKRKAIELEEGLSQDHRTRPRCNGLTVI 129
           QQ   NNNKRKAI  EEGLS D RTRPR +GLTV+
Sbjct: 187 QQQQSNNNKRKAI--EEGLSPD-RTRPRYSGLTVV 218


>emb|CBX43988.1| putative A-type response regulator 6 [Populus x canadensis]
          Length = 230

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 48/101 (47%), Positives = 59/101 (58%), Gaps = 10/101 (9%)
 Frame = -2

Query: 401 LKPVRLTDVNKLKPHMLKTKDK-----DSEKLEKETQQIQGXXXXXXXXXXXXQKAAAAT 237
           LKPVRL D+N+LKPHM+KTK K     D EKLEK   +IQ              +  + +
Sbjct: 134 LKPVRLADLNRLKPHMMKTKIKNEKQEDQEKLEK--SEIQSEQQQQPLQPQPQPQPESQS 191

Query: 236 QQQVI-----GNNNKRKAIELEEGLSQDHRTRPRCNGLTVI 129
           Q Q +      NNNKRKA  +EEGLS D RTRPR NG+T +
Sbjct: 192 QPQPLPLLQQPNNNKRKA--MEEGLSPD-RTRPRYNGITTM 229


>ref|XP_002322625.1| type-a response regulator [Populus trichocarpa]
           gi|222867255|gb|EEF04386.1| type-a response regulator
           [Populus trichocarpa]
          Length = 227

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 42/98 (42%), Positives = 57/98 (58%), Gaps = 7/98 (7%)
 Frame = -2

Query: 401 LKPVRLTDVNKLKPHMLKTKDKDSEKLEKETQQIQGXXXXXXXXXXXXQKAAAATQQQ-- 228
           LKPVRL+D+N+LKPHM+KTK K+ ++ E+E  +I                +    + Q  
Sbjct: 132 LKPVRLSDLNRLKPHMMKTKIKNQKQEEQEELEIPAIQSEEQKQPVQQPSSQPQPESQPQ 191

Query: 227 -----VIGNNNKRKAIELEEGLSQDHRTRPRCNGLTVI 129
                +  NNNKRKA  +EEGLS D RTRPR NG+T +
Sbjct: 192 PSALLLQPNNNKRKA--MEEGLSPD-RTRPRYNGITTM 226


>ref|XP_002532588.1| two-component system sensor histidine kinase/response regulator,
           putative [Ricinus communis] gi|223527676|gb|EEF29785.1|
           two-component system sensor histidine kinase/response
           regulator, putative [Ricinus communis]
          Length = 221

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 38/94 (40%), Positives = 58/94 (61%), Gaps = 3/94 (3%)
 Frame = -2

Query: 401 LKPVRLTDVNKLKPHMLKTKDKDSEKLEKETQQIQGXXXXXXXXXXXXQK---AAAATQQ 231
           LKPV+L+D+N+L+PHM+KTK K+ ++ ++E QQ+               +   +     Q
Sbjct: 130 LKPVQLSDLNRLRPHMMKTKSKNDKQEKQENQQVLEESEVQSQLQSSQTQHLLSPPPPPQ 189

Query: 230 QVIGNNNKRKAIELEEGLSQDHRTRPRCNGLTVI 129
           Q + NNNKRK+  +EEGLS + RTRPR N +T +
Sbjct: 190 QPLNNNNKRKS--MEEGLSPE-RTRPRYNDITTV 220


>ref|XP_002307983.1| type-a response regulator [Populus trichocarpa]
           gi|222853959|gb|EEE91506.1| type-a response regulator
           [Populus trichocarpa]
          Length = 233

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 48/102 (47%), Positives = 57/102 (55%), Gaps = 11/102 (10%)
 Frame = -2

Query: 401 LKPVRLTDVNKLKPHMLKTKDK-----DSEKLE-KETQQIQGXXXXXXXXXXXXQKAAAA 240
           LKPVRL D+N+LKPHM+KTK K     D EKLE  E Q  Q              +  + 
Sbjct: 134 LKPVRLADLNRLKPHMMKTKIKNEKQEDQEKLENSEIQSEQQPQPPSQPQPQPQPQLESQ 193

Query: 239 TQQQVI-----GNNNKRKAIELEEGLSQDHRTRPRCNGLTVI 129
           +Q Q        NNNKRKA  +EEGLS D RTRPR NG+T +
Sbjct: 194 SQPQPSPLLQQPNNNKRKA--MEEGLSPD-RTRPRYNGITTM 232


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