BLASTX nr result

ID: Bupleurum21_contig00031701 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00031701
         (653 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279295.1| PREDICTED: disease resistance protein RPS2 [...   252   4e-65
emb|CAN68181.1| hypothetical protein VITISV_013393 [Vitis vinifera]   249   3e-64
gb|AAM90858.1|AF487796_1 RPS2 [Arabidopsis lyrata]                    225   6e-57
ref|XP_002869629.1| hypothetical protein ARALYDRAFT_913954 [Arab...   225   6e-57
gb|AAM90880.1|AF487818_1 RPS2 [Arabidopsis thaliana] gi|15606902...   224   1e-56

>ref|XP_002279295.1| PREDICTED: disease resistance protein RPS2 [Vitis vinifera]
          Length = 903

 Score =  252 bits (644), Expect = 4e-65
 Identities = 135/215 (62%), Positives = 155/215 (72%), Gaps = 3/215 (1%)
 Frame = -3

Query: 651  QVKLHDVVRSFVLWIASDGGADNTKFLVQPSAGLTEAPSVEKWERAHRISLMDNDISELS 472
            QVK+HDVVRSF LWI+S  G +  KFL+QPS GLTEAP VE W  A RISL+DN I+ LS
Sbjct: 464  QVKMHDVVRSFALWISSGYGRNEKKFLIQPSIGLTEAPRVENWRFAERISLLDNGITALS 523

Query: 471  EVPVCPHXXXXXXXXXXXXSKISRGFFQFMPVLKVLDLSFTNIKEIPDSICHLVELRYLD 292
            E+P CP             ++I+ GFF FMPVL+VLDLSFT++KEIP SI  LVELR+LD
Sbjct: 524  EIPDCPSLSTLLLQWNSGLNRITVGFFHFMPVLRVLDLSFTSLKEIPVSIGELVELRHLD 583

Query: 291  LSGSKLVALPKEMGNLAKLMYLDLSRTHYLRTIPREAISGLSQLKVLNLYYSYAGWE--- 121
            LSG+KL ALPKE+G+LAKL  LDL RTH LRTIP EAIS LSQL+VLN YYSY GWE   
Sbjct: 584  LSGTKLTALPKELGSLAKLRLLDLQRTHSLRTIPHEAISRLSQLRVLNFYYSYGGWEALN 643

Query: 120  LEDIRGLIKFADLERLRHLTTLGITATELRTLEEL 16
             +       FADLE LRHL+TLGIT  E  TL  L
Sbjct: 644  CDAPESDASFADLEGLRHLSTLGITVIESTTLRRL 678


>emb|CAN68181.1| hypothetical protein VITISV_013393 [Vitis vinifera]
          Length = 928

 Score =  249 bits (636), Expect = 3e-64
 Identities = 133/212 (62%), Positives = 153/212 (72%), Gaps = 3/212 (1%)
 Frame = -3

Query: 651  QVKLHDVVRSFVLWIASDGGADNTKFLVQPSAGLTEAPSVEKWERAHRISLMDNDISELS 472
            QVK+HDVVRSF LWI+S  G +  KFL+QPS GLTEAP VE W  A RISL+DN I+ LS
Sbjct: 513  QVKMHDVVRSFALWISSGYGRNEKKFLIQPSIGLTEAPRVENWRFAERISLLDNGITALS 572

Query: 471  EVPVCPHXXXXXXXXXXXXSKISRGFFQFMPVLKVLDLSFTNIKEIPDSICHLVELRYLD 292
            E+P CP             ++I+ GFF FMPVL+VLDLSFT++KEIP SI  LVELR+LD
Sbjct: 573  EIPDCPSLSTLLLQWNSGLNRITVGFFHFMPVLRVLDLSFTSLKEIPVSIXELVELRHLD 632

Query: 291  LSGSKLVALPKEMGNLAKLMYLDLSRTHYLRTIPREAISGLSQLKVLNLYYSYAGWE--- 121
            LSG+KL ALPKE+G+LAKL  LDL RTH LRTIP EAIS LSQL+VLN YYSY GWE   
Sbjct: 633  LSGTKLTALPKELGSLAKLRLLDLQRTHSLRTIPHEAISRLSQLRVLNFYYSYGGWEALN 692

Query: 120  LEDIRGLIKFADLERLRHLTTLGITATELRTL 25
             +       FADLE LRHL+TLGIT  E   L
Sbjct: 693  CDAPESDASFADLEGLRHLSTLGITIKECEGL 724


>gb|AAM90858.1|AF487796_1 RPS2 [Arabidopsis lyrata]
          Length = 907

 Score =  225 bits (573), Expect = 6e-57
 Identities = 122/219 (55%), Positives = 150/219 (68%), Gaps = 4/219 (1%)
 Frame = -3

Query: 651  QVKLHDVVRSFVLWIASDGGADNTKFLVQPSAGLTEAPSVEKWERAHRISLMDNDISELS 472
            QVK+H+VVRSF LW+AS+ G      LV+P+ G TEAP  E W +A  ISL+DN I  L 
Sbjct: 468  QVKMHNVVRSFALWMASEQGTYKELILVEPNMGHTEAPKAENWRQALVISLIDNRIQTLP 527

Query: 471  EVPVCPHXXXXXXXXXXXXSKISRGFFQFMPVLKVLDLSFTNIKEIPDSICHLVELRYLD 292
            E P+CP              KIS GFF  MP+L+VLDLSFT+I EIP SI +LVEL +L 
Sbjct: 528  EKPICPKLTTLMLQRNSSLKKISTGFFMHMPILRVLDLSFTSITEIPLSIKYLVELCHLS 587

Query: 291  LSGSKLVALPKEMGNLAKLMYLDLSRTHYLRTIPREAISGLSQLKVLNLYYSYAGWEL-- 118
            +SG+K+  LP+E+GNL KL +LDL RT +L+TIPR+AI  LS+L+VLNLYYSYAGWEL  
Sbjct: 588  MSGTKISILPQELGNLRKLKHLDLQRTQFLQTIPRDAICWLSKLEVLNLYYSYAGWELQS 647

Query: 117  --EDIRGLIKFADLERLRHLTTLGITATELRTLEELYVF 7
              ED    + F DLE L +LTTLGIT   L TL+ LY F
Sbjct: 648  FGEDKVEELGFDDLEYLENLTTLGITVLSLETLKTLYEF 686


>ref|XP_002869629.1| hypothetical protein ARALYDRAFT_913954 [Arabidopsis lyrata subsp.
            lyrata] gi|297315465|gb|EFH45888.1| hypothetical protein
            ARALYDRAFT_913954 [Arabidopsis lyrata subsp. lyrata]
          Length = 907

 Score =  225 bits (573), Expect = 6e-57
 Identities = 122/219 (55%), Positives = 150/219 (68%), Gaps = 4/219 (1%)
 Frame = -3

Query: 651  QVKLHDVVRSFVLWIASDGGADNTKFLVQPSAGLTEAPSVEKWERAHRISLMDNDISELS 472
            QVK+H+VVRSF LW+AS+ G      LV+P+ G TEAP  E W +A  ISL+DN I  L 
Sbjct: 468  QVKMHNVVRSFALWMASEQGTYKELILVEPNMGHTEAPKAENWRQALVISLIDNRIQTLP 527

Query: 471  EVPVCPHXXXXXXXXXXXXSKISRGFFQFMPVLKVLDLSFTNIKEIPDSICHLVELRYLD 292
            E P+CP              KIS GFF  MP+L+VLDLSFT+I EIP SI +LVEL +L 
Sbjct: 528  EKPICPKLTTLMLQRNSSLKKISTGFFMHMPILRVLDLSFTSITEIPLSIKYLVELCHLS 587

Query: 291  LSGSKLVALPKEMGNLAKLMYLDLSRTHYLRTIPREAISGLSQLKVLNLYYSYAGWEL-- 118
            +SG+K+  LP+E+GNL KL +LDL RT +L+TIPR+AI  LS+L+VLNLYYSYAGWEL  
Sbjct: 588  MSGTKISILPQELGNLRKLKHLDLQRTQFLQTIPRDAICWLSKLEVLNLYYSYAGWELQS 647

Query: 117  --EDIRGLIKFADLERLRHLTTLGITATELRTLEELYVF 7
              ED    + F DLE L +LTTLGIT   L TL+ LY F
Sbjct: 648  FGEDEVEELGFDDLEYLENLTTLGITVLSLETLKTLYEF 686


>gb|AAM90880.1|AF487818_1 RPS2 [Arabidopsis thaliana] gi|156069020|gb|ABU44503.1| RPS2
            [Arabidopsis thaliana]
          Length = 909

 Score =  224 bits (571), Expect = 1e-56
 Identities = 122/219 (55%), Positives = 149/219 (68%), Gaps = 4/219 (1%)
 Frame = -3

Query: 651  QVKLHDVVRSFVLWIASDGGADNTKFLVQPSAGLTEAPSVEKWERAHRISLMDNDISELS 472
            QVK+H+VVRSF LW+AS+ G      LV+PS G TEAP  E W +A  ISL+DN I  L 
Sbjct: 468  QVKMHNVVRSFALWMASEQGTYKELILVEPSMGHTEAPKAENWRQALAISLLDNRIQTLP 527

Query: 471  EVPVCPHXXXXXXXXXXXXSKISRGFFQFMPVLKVLDLSFTNIKEIPDSICHLVELRYLD 292
            E  +CP              KI  GFF  MPVL+VLDLSFT+I EIP SI +LVEL +L 
Sbjct: 528  EKLICPKLTTLMLQQNSSLKKIPTGFFMHMPVLRVLDLSFTSITEIPLSIKYLVELYHLS 587

Query: 291  LSGSKLVALPKEMGNLAKLMYLDLSRTHYLRTIPREAISGLSQLKVLNLYYSYAGWEL-- 118
            +SG+K+  LP+E+GNL KL +LDL RT +L+TIPR+AI  LS+L+VLNLYYSYAGWEL  
Sbjct: 588  MSGTKISVLPQELGNLRKLKHLDLQRTQFLQTIPRDAICWLSKLEVLNLYYSYAGWELQS 647

Query: 117  --EDIRGLIKFADLERLRHLTTLGITATELRTLEELYVF 7
              ED    + FADLE L +LTTLGIT   L TL+ L+ F
Sbjct: 648  FGEDEAEELGFADLEYLENLTTLGITVLSLETLKTLFEF 686


Top