BLASTX nr result

ID: Bupleurum21_contig00031699 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00031699
         (418 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305165.1| predicted protein [Populus trichocarpa] gi|2...   108   4e-22
ref|XP_002280445.1| PREDICTED: uncharacterized protein LOC100242...   108   4e-22
gb|AFK45210.1| unknown [Lotus japonicus]                              106   2e-21
dbj|BAJ88217.1| predicted protein [Hordeum vulgare subsp. vulgare]    104   6e-21
ref|XP_002533946.1| conserved hypothetical protein [Ricinus comm...   101   5e-20

>ref|XP_002305165.1| predicted protein [Populus trichocarpa] gi|222848129|gb|EEE85676.1|
           predicted protein [Populus trichocarpa]
          Length = 308

 Score =  108 bits (270), Expect = 4e-22
 Identities = 48/71 (67%), Positives = 60/71 (84%)
 Frame = +3

Query: 3   SPPVPAARDPSLQILVLGANDDFIVDAKGVDETGKFYGVQPVCIEGVAHDMMLDTSWERG 182
           S PVP+A   S+++LVLGANDDFIVD +G++ETG+FYGV P+C+EGVAHDMMLD SWE+G
Sbjct: 237 SLPVPSALKSSIEVLVLGANDDFIVDTEGLNETGRFYGVSPICVEGVAHDMMLDCSWEKG 296

Query: 183 AMKILDWLHNL 215
           A  IL WL+ L
Sbjct: 297 ARAILSWLNCL 307


>ref|XP_002280445.1| PREDICTED: uncharacterized protein LOC100242848 [Vitis vinifera]
           gi|296087270|emb|CBI33644.3| unnamed protein product
           [Vitis vinifera]
          Length = 342

 Score =  108 bits (270), Expect = 4e-22
 Identities = 49/74 (66%), Positives = 61/74 (82%)
 Frame = +3

Query: 3   SPPVPAARDPSLQILVLGANDDFIVDAKGVDETGKFYGVQPVCIEGVAHDMMLDTSWERG 182
           S PVP+    S+++LV+GANDDFIVD++G+ ETGKFYGV PVCIEGVAHDMMLD SWE+G
Sbjct: 266 SLPVPSVPKSSIEVLVVGANDDFIVDSEGLRETGKFYGVSPVCIEGVAHDMMLDCSWEKG 325

Query: 183 AMKILDWLHNLKRK 224
           A  IL WL+ L ++
Sbjct: 326 AEVILSWLNGLNKQ 339


>gb|AFK45210.1| unknown [Lotus japonicus]
          Length = 333

 Score =  106 bits (265), Expect = 2e-21
 Identities = 50/73 (68%), Positives = 59/73 (80%)
 Frame = +3

Query: 3   SPPVPAARDPSLQILVLGANDDFIVDAKGVDETGKFYGVQPVCIEGVAHDMMLDTSWERG 182
           S PVP+  +  L ILVLGAN+DFIVDA+G+ ET KFYGV PVC+EGVAHDMMLDTSWE+G
Sbjct: 261 SLPVPSTPNCPLDILVLGANNDFIVDAEGLRETAKFYGVSPVCVEGVAHDMMLDTSWEKG 320

Query: 183 AMKILDWLHNLKR 221
           A  IL WL+ L +
Sbjct: 321 AEVILSWLNGLNK 333


>dbj|BAJ88217.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 208

 Score =  104 bits (260), Expect = 6e-21
 Identities = 48/71 (67%), Positives = 59/71 (83%)
 Frame = +3

Query: 3   SPPVPAARDPSLQILVLGANDDFIVDAKGVDETGKFYGVQPVCIEGVAHDMMLDTSWERG 182
           S PVP+A D +L+ILV+GA++DFIVDA+G+ ET +FY VQPVC+EGVAHDMMLD SWE+G
Sbjct: 133 SLPVPSATDGTLEILVMGASNDFIVDAEGLSETARFYNVQPVCVEGVAHDMMLDCSWEKG 192

Query: 183 AMKILDWLHNL 215
           A  IL WL  L
Sbjct: 193 AEIILSWLDQL 203


>ref|XP_002533946.1| conserved hypothetical protein [Ricinus communis]
           gi|223526077|gb|EEF28432.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 90

 Score =  101 bits (252), Expect = 5e-20
 Identities = 46/73 (63%), Positives = 57/73 (78%)
 Frame = +3

Query: 3   SPPVPAARDPSLQILVLGANDDFIVDAKGVDETGKFYGVQPVCIEGVAHDMMLDTSWERG 182
           S PVP+    S++ LV+GA DDFIVDA+G+ ETG+ YGV P+C+EGVAHDMMLD SWE+G
Sbjct: 18  SLPVPSVPKSSIEALVIGARDDFIVDAEGLAETGRLYGVSPICVEGVAHDMMLDCSWEKG 77

Query: 183 AMKILDWLHNLKR 221
           A  IL WL+ L R
Sbjct: 78  AEHILLWLNGLSR 90


Top