BLASTX nr result

ID: Bupleurum21_contig00031692 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00031692
         (417 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266168.2| PREDICTED: uncharacterized protein LOC100266...   185   3e-45
emb|CBI33596.3| unnamed protein product [Vitis vinifera]              185   3e-45
ref|XP_003551833.1| PREDICTED: uncharacterized protein LOC100807...   177   6e-43
ref|XP_002528057.1| DNA ligase I, putative [Ricinus communis] gi...   177   6e-43
ref|XP_003624408.1| DNA ligase [Medicago truncatula] gi|35549942...   177   8e-43

>ref|XP_002266168.2| PREDICTED: uncharacterized protein LOC100266816 [Vitis vinifera]
          Length = 1449

 Score =  185 bits (470), Expect = 3e-45
 Identities = 101/142 (71%), Positives = 110/142 (77%), Gaps = 3/142 (2%)
 Frame = +1

Query: 1    LIMNLMRSCREKEIKYLVRTLVRNLRIGAMMRTVLPALAQAVAMSSAPA---EGITENTK 171
            LI+NLMRSCREKEIK+LVRTLVRNLRIGAMMRTVLPALAQAV + S+P    +G TEN K
Sbjct: 959  LILNLMRSCREKEIKFLVRTLVRNLRIGAMMRTVLPALAQAVVLHSSPNFYHKGTTENIK 1018

Query: 172  VQLQELSAVVVEAYXXXXXXXXXXXXXXXXGIRFSSTTLSMVPGIPIKPMLAKITNGTSQ 351
             +LQ LSA VVEAY                GI FSS++LSMVPGIPIKPMLAKITNG  Q
Sbjct: 1019 EKLQCLSAAVVEAYNILPNLDLLIPSLLDKGIGFSSSSLSMVPGIPIKPMLAKITNGVPQ 1078

Query: 352  VLKLFSSKAFTCEYKYDGQRAQ 417
             LKLF +KAFTCEYKYDGQRAQ
Sbjct: 1079 ALKLFQNKAFTCEYKYDGQRAQ 1100


>emb|CBI33596.3| unnamed protein product [Vitis vinifera]
          Length = 1390

 Score =  185 bits (470), Expect = 3e-45
 Identities = 101/142 (71%), Positives = 110/142 (77%), Gaps = 3/142 (2%)
 Frame = +1

Query: 1    LIMNLMRSCREKEIKYLVRTLVRNLRIGAMMRTVLPALAQAVAMSSAPA---EGITENTK 171
            LI+NLMRSCREKEIK+LVRTLVRNLRIGAMMRTVLPALAQAV + S+P    +G TEN K
Sbjct: 900  LILNLMRSCREKEIKFLVRTLVRNLRIGAMMRTVLPALAQAVVLHSSPNFYHKGTTENIK 959

Query: 172  VQLQELSAVVVEAYXXXXXXXXXXXXXXXXGIRFSSTTLSMVPGIPIKPMLAKITNGTSQ 351
             +LQ LSA VVEAY                GI FSS++LSMVPGIPIKPMLAKITNG  Q
Sbjct: 960  EKLQCLSAAVVEAYNILPNLDLLIPSLLDKGIGFSSSSLSMVPGIPIKPMLAKITNGVPQ 1019

Query: 352  VLKLFSSKAFTCEYKYDGQRAQ 417
             LKLF +KAFTCEYKYDGQRAQ
Sbjct: 1020 ALKLFQNKAFTCEYKYDGQRAQ 1041


>ref|XP_003551833.1| PREDICTED: uncharacterized protein LOC100807673 [Glycine max]
          Length = 1402

 Score =  177 bits (450), Expect = 6e-43
 Identities = 96/142 (67%), Positives = 107/142 (75%), Gaps = 3/142 (2%)
 Frame = +1

Query: 1    LIMNLMRSCREKEIKYLVRTLVRNLRIGAMMRTVLPALAQAVAMSSAPA---EGITENTK 171
            +I++LMRSCREKE+K+LVRTLVRNLRIGAM+RTVLPALA AVAM+S P    EG  EN K
Sbjct: 911  IIVHLMRSCREKEMKFLVRTLVRNLRIGAMLRTVLPALAHAVAMNSCPTLHQEGTAENIK 970

Query: 172  VQLQELSAVVVEAYXXXXXXXXXXXXXXXXGIRFSSTTLSMVPGIPIKPMLAKITNGTSQ 351
             +LQ LS  VVEAY                GI FS ++LSMVPGIPIKPMLAKITNG  Q
Sbjct: 971  EKLQVLSMAVVEAYNILPNLDLIVPSLMNKGIDFSVSSLSMVPGIPIKPMLAKITNGIPQ 1030

Query: 352  VLKLFSSKAFTCEYKYDGQRAQ 417
             LKLF +KAFTCEYKYDGQRAQ
Sbjct: 1031 ALKLFENKAFTCEYKYDGQRAQ 1052


>ref|XP_002528057.1| DNA ligase I, putative [Ricinus communis] gi|223532518|gb|EEF34307.1|
            DNA ligase I, putative [Ricinus communis]
          Length = 1360

 Score =  177 bits (450), Expect = 6e-43
 Identities = 96/141 (68%), Positives = 109/141 (77%), Gaps = 2/141 (1%)
 Frame = +1

Query: 1    LIMNLMRSCREKEIKYLVRTLVRNLRIGAMMRTVLPALAQAVAMSSA--PAEGITENTKV 174
            LI+NLMRSCREKE+K++VRTLVRNLRIGA+M+TVLPALAQAVAM S    +E   E+ K 
Sbjct: 870  LIVNLMRSCREKEMKFIVRTLVRNLRIGAVMKTVLPALAQAVAMHSLVKSSEQKAESLKE 929

Query: 175  QLQELSAVVVEAYXXXXXXXXXXXXXXXXGIRFSSTTLSMVPGIPIKPMLAKITNGTSQV 354
            +LQ LSA V+EAY                GI FSS++LSMVPG+PIKPMLAKITNG SQV
Sbjct: 930  KLQYLSAAVIEAYNILPNLDLLIPSLISKGIDFSSSSLSMVPGVPIKPMLAKITNGVSQV 989

Query: 355  LKLFSSKAFTCEYKYDGQRAQ 417
            LKLF  KAFTCEYKYDGQRAQ
Sbjct: 990  LKLFQDKAFTCEYKYDGQRAQ 1010


>ref|XP_003624408.1| DNA ligase [Medicago truncatula] gi|355499423|gb|AES80626.1| DNA
            ligase [Medicago truncatula]
          Length = 1498

 Score =  177 bits (449), Expect = 8e-43
 Identities = 95/142 (66%), Positives = 105/142 (73%), Gaps = 3/142 (2%)
 Frame = +1

Query: 1    LIMNLMRSCREKEIKYLVRTLVRNLRIGAMMRTVLPALAQAVAMSSAPA---EGITENTK 171
            +I++LMRSCREKE+K+LVRTLVRNLRIGAM+RTVLPALA AV M+S P    EG  EN K
Sbjct: 935  IILHLMRSCREKEMKFLVRTLVRNLRIGAMLRTVLPALAHAVVMNSRPTVYEEGTAENLK 994

Query: 172  VQLQELSAVVVEAYXXXXXXXXXXXXXXXXGIRFSSTTLSMVPGIPIKPMLAKITNGTSQ 351
              LQ LS  VVEAY                GI FS ++LSMVPGIPIKPMLAKITNG  Q
Sbjct: 995  AALQVLSVAVVEAYNILPNLDIIVPTLMNKGIEFSVSSLSMVPGIPIKPMLAKITNGIPQ 1054

Query: 352  VLKLFSSKAFTCEYKYDGQRAQ 417
             LKLF +KAFTCEYKYDGQRAQ
Sbjct: 1055 ALKLFQNKAFTCEYKYDGQRAQ 1076


Top