BLASTX nr result

ID: Bupleurum21_contig00031685 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00031685
         (301 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003556580.1| PREDICTED: ATP-dependent DNA helicase 2 subu...    62   4e-08
ref|XP_002521532.1| ku P70 DNA helicase, putative [Ricinus commu...    62   5e-08
ref|XP_002461302.1| hypothetical protein SORBIDRAFT_02g000480 [S...    61   8e-08
gb|ABR16802.1| unknown [Picea sitchensis]                              61   1e-07
gb|AAT48365.1| Ku70-like protein [Vigna radiata]                       61   1e-07

>ref|XP_003556580.1| PREDICTED: ATP-dependent DNA helicase 2 subunit KU70-like [Glycine
           max]
          Length = 633

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 30/38 (78%), Positives = 31/38 (81%)
 Frame = -3

Query: 299 KLKDLTVAELKLYLTAHGLPVSGKKEVLIDRILNHMEK 186
           KLKDLTV ELK YLTAH LPVSGKKE +I RIL HM K
Sbjct: 596 KLKDLTVVELKYYLTAHNLPVSGKKEAIISRILTHMAK 633


>ref|XP_002521532.1| ku P70 DNA helicase, putative [Ricinus communis]
           gi|223539210|gb|EEF40803.1| ku P70 DNA helicase,
           putative [Ricinus communis]
          Length = 626

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 29/38 (76%), Positives = 33/38 (86%)
 Frame = -3

Query: 299 KLKDLTVAELKLYLTAHGLPVSGKKEVLIDRILNHMEK 186
           KLKDLTVAELKLYLTAH +PV+GKKE LI +IL H+ K
Sbjct: 589 KLKDLTVAELKLYLTAHNIPVAGKKEALISKILTHLGK 626


>ref|XP_002461302.1| hypothetical protein SORBIDRAFT_02g000480 [Sorghum bicolor]
           gi|241924679|gb|EER97823.1| hypothetical protein
           SORBIDRAFT_02g000480 [Sorghum bicolor]
          Length = 628

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 28/36 (77%), Positives = 32/36 (88%)
 Frame = -3

Query: 299 KLKDLTVAELKLYLTAHGLPVSGKKEVLIDRILNHM 192
           KLK++TV ELK YLTAHGLPVSGKKEVL+ RIL H+
Sbjct: 591 KLKEMTVVELKSYLTAHGLPVSGKKEVLVSRILTHL 626


>gb|ABR16802.1| unknown [Picea sitchensis]
          Length = 630

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 29/38 (76%), Positives = 32/38 (84%)
 Frame = -3

Query: 299 KLKDLTVAELKLYLTAHGLPVSGKKEVLIDRILNHMEK 186
           KLKDLTV ELK YLTAH LPV+GKKEVLI+RI  H+ K
Sbjct: 593 KLKDLTVVELKYYLTAHNLPVTGKKEVLINRIFTHLGK 630


>gb|AAT48365.1| Ku70-like protein [Vigna radiata]
          Length = 629

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 29/38 (76%), Positives = 31/38 (81%)
 Frame = -3

Query: 299 KLKDLTVAELKLYLTAHGLPVSGKKEVLIDRILNHMEK 186
           KLKDLTV ELK YLTAH LPVSGKKE +I RI +HM K
Sbjct: 592 KLKDLTVVELKYYLTAHNLPVSGKKEAIISRIFSHMGK 629


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