BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00031680
         (601 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280643.1| PREDICTED: E3 ubiquitin-protein ligase ATL42...   255   5e-66
emb|CBI28025.3| unnamed protein product [Vitis vinifera]              241   9e-62
ref|XP_002325015.1| predicted protein [Populus trichocarpa] gi|2...   235   4e-60
ref|XP_003620577.1| RING finger family protein [Medicago truncat...   234   9e-60
ref|XP_003517066.1| PREDICTED: E3 ubiquitin-protein ligase ATL42...   232   4e-59

>ref|XP_002280643.1| PREDICTED: E3 ubiquitin-protein ligase ATL42 [Vitis vinifera]
          Length = 423

 Score =  255 bits (651), Expect = 5e-66
 Identities = 133/204 (65%), Positives = 155/204 (75%), Gaps = 8/204 (3%)
 Frame = +3

Query: 9   FIFMFLIVKTQSQAQGHVHN--------NFHPSLAAIISVLCCMVFFTFILLVYAKYCHR 164
           F+   L+   +SQA     N         F PSLA +I +L  M   TFILLVYAK CHR
Sbjct: 10  FLLSGLLFNVESQAAPGQENFSSQDAVTAFKPSLAVVIGILAVMFLLTFILLVYAKLCHR 69

Query: 165 SPPLDGPPIQGMLTRSRSRYSGIDKTVIESLPFFRFSSVRGSRQGLECAVCLSKFEDIEI 344
           +   D    QG LTRS SR+SGIDKTVIESLPFFRF S++GS++GLECAVCLSKFEDIEI
Sbjct: 70  ASNSDRENQQG-LTRSESRFSGIDKTVIESLPFFRFCSLKGSKEGLECAVCLSKFEDIEI 128

Query: 345 LRLLPKCKHAFHINCVDKWLEKHSTCPLCRHKVSKEDLAVLASSNSLRFLRGHSDLRQDS 524
           LRLLPKCKHAFHI+CVD+WLEKHS+CPLCRHKVS EDLA+L  SNSLRFL   S+LR++S
Sbjct: 129 LRLLPKCKHAFHIDCVDQWLEKHSSCPLCRHKVSAEDLAILTYSNSLRFLWNQSELRENS 188

Query: 525 NLEIFVQREEEDNNNRGSSRFSVG 596
           NLE+FVQREE+   + GSSRFS+G
Sbjct: 189 NLELFVQREED---HHGSSRFSIG 209


>emb|CBI28025.3| unnamed protein product [Vitis vinifera]
          Length = 413

 Score =  241 bits (614), Expect = 9e-62
 Identities = 126/204 (61%), Positives = 149/204 (73%), Gaps = 17/204 (8%)
 Frame = +3

Query: 9   FIFMFLIVKTQSQAQGHVHN--------NFHPSLAAIISVLCCMVFFTFILLVYAKYCHR 164
           F+   L+   +SQA     N         F PSLA +I +L  M   TFILLVYAK CHR
Sbjct: 56  FLLSGLLFNVESQAAPGQENFSSQDAVTAFKPSLAVVIGILAVMFLLTFILLVYAKLCHR 115

Query: 165 SPPLDGPPIQGMLTRSRSRYSGIDKTVIESLPFFRFSSVRGSRQGLECAVCLSKFEDIEI 344
           +   D    QG LTRS SR+SGIDKTVIESLPFFRF S++GS++GLECAVCLSKFEDIEI
Sbjct: 116 ASNSDRENQQG-LTRSESRFSGIDKTVIESLPFFRFCSLKGSKEGLECAVCLSKFEDIEI 174

Query: 345 LRLLPKCKHAFHINCVDKWLEKHSTCPLCRHKVSKEDLAVLASSNSLRFLRGHSDLRQDS 524
           LRLLPKCKHAFHI+CVD+WLEKHS+CPLCRHKVS EDLA+L  SNSLRFL   S+LR++S
Sbjct: 175 LRLLPKCKHAFHIDCVDQWLEKHSSCPLCRHKVSAEDLAILTYSNSLRFLWNQSELRENS 234

Query: 525 NLEIF---------VQREEEDNNN 569
           NLE+F         +Q EE+DN++
Sbjct: 235 NLELFGVKEEESVLIQEEEDDNDD 258


>ref|XP_002325015.1| predicted protein [Populus trichocarpa] gi|222866449|gb|EEF03580.1|
           predicted protein [Populus trichocarpa]
          Length = 201

 Score =  235 bits (600), Expect = 4e-60
 Identities = 118/188 (62%), Positives = 146/188 (77%), Gaps = 9/188 (4%)
 Frame = +3

Query: 18  MFLIVKTQSQ---AQGH-----VHNNFHPSLAAIISVLCCMVFFTFILLVYAKYCHRSPP 173
           +F++ + Q+Q    QG+       +NF PSLA +I +L  +   TFILL+YAK+CHR   
Sbjct: 12  LFVLFRVQAQNTFIQGNEPSQDAVSNFRPSLAVVIGILFLIFSLTFILLIYAKFCHRGGL 71

Query: 174 LDGPPIQG-MLTRSRSRYSGIDKTVIESLPFFRFSSVRGSRQGLECAVCLSKFEDIEILR 350
           + G    G  LTRS SR+SGIDKTVIESLPFFRF+S++GSR+GLECAVCLSKFEDIEILR
Sbjct: 72  VHGGSENGPALTRSVSRFSGIDKTVIESLPFFRFTSLKGSREGLECAVCLSKFEDIEILR 131

Query: 351 LLPKCKHAFHINCVDKWLEKHSTCPLCRHKVSKEDLAVLASSNSLRFLRGHSDLRQDSNL 530
           LLPKCKHAFHINCVD+WLEKHS+CPLCR KV+ ED  +   SNS+R+L   S+LR+DSN+
Sbjct: 132 LLPKCKHAFHINCVDQWLEKHSSCPLCRRKVNPEDPTIFTYSNSMRYLGNQSELREDSNV 191

Query: 531 EIFVQREE 554
           E+FVQREE
Sbjct: 192 ELFVQREE 199


>ref|XP_003620577.1| RING finger family protein [Medicago truncatula]
           gi|355495592|gb|AES76795.1| RING finger family protein
           [Medicago truncatula]
          Length = 362

 Score =  234 bits (597), Expect = 9e-60
 Identities = 123/206 (59%), Positives = 150/206 (72%), Gaps = 8/206 (3%)
 Frame = +3

Query: 3   LIFIFMFLIVKTQSQAQG----HVHNNFHPSLAAIISVLCCMVFFTFILLVYAKYCHRS- 167
           LI   +F  ++ QS  Q        +NF PSL  +I++L  M   TFILL++AK CHR  
Sbjct: 10  LILSTLFFHIRAQSPTQTTNSQDAVSNFQPSLVVVIAILGLMFSLTFILLIFAKVCHRRQ 69

Query: 168 --PPLDGPPIQ-GMLTRSRSRYSGIDKTVIESLPFFRFSSVRGSRQGLECAVCLSKFEDI 338
             P  D P  Q   L RSRSR+SGIDKT IESLPFF+FSS++GS+QGLEC++CLSKFEDI
Sbjct: 70  LLPISDDPNNQLATLMRSRSRFSGIDKTAIESLPFFKFSSLKGSKQGLECSICLSKFEDI 129

Query: 339 EILRLLPKCKHAFHINCVDKWLEKHSTCPLCRHKVSKEDLAVLASSNSLRFLRGHSDLRQ 518
           EILRLLPKCKHAFHI+C+D WLEKHS+CP+CRHKV+ ED    A SNSLR L     + +
Sbjct: 130 EILRLLPKCKHAFHIDCIDHWLEKHSSCPICRHKVNIEDQTTFAYSNSLRML-----VSE 184

Query: 519 DSNLEIFVQREEEDNNNRGSSRFSVG 596
           +SN+EIFV+R EEDNN  GSSRFS+G
Sbjct: 185 ESNIEIFVER-EEDNNQHGSSRFSIG 209


>ref|XP_003517066.1| PREDICTED: E3 ubiquitin-protein ligase ATL42-like [Glycine max]
          Length = 426

 Score =  232 bits (591), Expect = 4e-59
 Identities = 115/183 (62%), Positives = 139/183 (75%), Gaps = 2/183 (1%)
 Frame = +3

Query: 54  GHVHNNFHPSLAAIISVLCCMVFFTFILLVYAKYCHR--SPPLDGPPIQGMLTRSRSRYS 227
           G   +NF PSLA +I +L  M   TF LL+YAK+C R  S P+     Q    RSRSR+S
Sbjct: 28  GDAVSNFQPSLAVVIGILGVMFLLTFFLLMYAKFCQRCASSPVGDTENQLPFVRSRSRFS 87

Query: 228 GIDKTVIESLPFFRFSSVRGSRQGLECAVCLSKFEDIEILRLLPKCKHAFHINCVDKWLE 407
           GIDK VIESLPFFRFSS++GS++GLECAVCLSKFED+EILRLLPKCKHAFHI+C+D WLE
Sbjct: 88  GIDKNVIESLPFFRFSSLKGSKEGLECAVCLSKFEDVEILRLLPKCKHAFHIDCIDHWLE 147

Query: 408 KHSTCPLCRHKVSKEDLAVLASSNSLRFLRGHSDLRQDSNLEIFVQREEEDNNNRGSSRF 587
           KHS+CP+CRH+V+ ED      SNSLR L   S++ ++SN+EIFVQREEE   + GSSRF
Sbjct: 148 KHSSCPICRHRVNPEDHTTFTYSNSLRRLANQSEVGEESNIEIFVQREEE---HHGSSRF 204

Query: 588 SVG 596
           S G
Sbjct: 205 SFG 207