BLASTX nr result

ID: Bupleurum21_contig00031662 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00031662
         (371 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|2...    72   4e-11
ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|2...    72   4e-11
ref|XP_002313562.1| predicted protein [Populus trichocarpa] gi|2...    72   4e-11
ref|XP_002329612.1| predicted protein [Populus trichocarpa] gi|2...    67   2e-09
ref|XP_002307835.1| predicted protein [Populus trichocarpa] gi|2...    65   4e-09

>ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|222874875|gb|EEF12006.1|
            predicted protein [Populus trichocarpa]
          Length = 1386

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 34/81 (41%), Positives = 47/81 (58%)
 Frame = -3

Query: 366  IPVPADCSWIWRKILTLREEAKSFVHYSIGNGSRTWLWFDPWYKNCNLSSYPSSQMITQS 187
            I  P +CSW W KIL LR  A   + Y IG+G  T LWFD W+ +  L+     + I  S
Sbjct: 1080 IKTPQNCSWAWGKILKLRSLAWPKMKYIIGDGMTTSLWFDNWHPHSPLADSYGERFIYDS 1139

Query: 186  GLCSDAKVSAIILSNEWALPT 124
            G+  +AKV+ +I ++EW  PT
Sbjct: 1140 GMAKNAKVNVLIQNSEWKTPT 1160


>ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|222873039|gb|EEF10170.1|
           predicted protein [Populus trichocarpa]
          Length = 517

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 34/81 (41%), Positives = 47/81 (58%)
 Frame = -3

Query: 366 IPVPADCSWIWRKILTLREEAKSFVHYSIGNGSRTWLWFDPWYKNCNLSSYPSSQMITQS 187
           I  P +CSW W KIL LR  A   + Y IG+G  T LWFD W+ +  L+     + I  S
Sbjct: 207 IKTPQNCSWAWGKILKLRSLAWPKMKYIIGDGMTTSLWFDNWHPHSPLADSYGERFIYDS 266

Query: 186 GLCSDAKVSAIILSNEWALPT 124
           G+  +AKV+ +I ++EW  PT
Sbjct: 267 GMAKNAKVNVLIQNSEWKTPT 287


>ref|XP_002313562.1| predicted protein [Populus trichocarpa] gi|222849970|gb|EEE87517.1|
           predicted protein [Populus trichocarpa]
          Length = 331

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 34/81 (41%), Positives = 47/81 (58%)
 Frame = -3

Query: 366 IPVPADCSWIWRKILTLREEAKSFVHYSIGNGSRTWLWFDPWYKNCNLSSYPSSQMITQS 187
           I  P +CSW W KIL LR  A   + Y IG+G  T LWFD W+ +  L+     + I  S
Sbjct: 25  IKTPQNCSWAWGKILKLRSLAWPKMKYIIGDGMTTSLWFDNWHPHSPLADSYGERFIYDS 84

Query: 186 GLCSDAKVSAIILSNEWALPT 124
           G+  +AKV+ +I ++EW  PT
Sbjct: 85  GMAKNAKVNVLIQNSEWKTPT 105


>ref|XP_002329612.1| predicted protein [Populus trichocarpa] gi|222870351|gb|EEF07482.1|
           predicted protein [Populus trichocarpa]
          Length = 1046

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 33/81 (40%), Positives = 46/81 (56%)
 Frame = -3

Query: 366 IPVPADCSWIWRKILTLREEAKSFVHYSIGNGSRTWLWFDPWYKNCNLSSYPSSQMITQS 187
           I  P +CS  W KIL LR  A   + Y IG+G  T LWFD W+ +  L+     + I  S
Sbjct: 740 IKTPQNCSSAWGKILKLRSLAWPKMKYIIGDGMTTSLWFDNWHPHSPLADSYGERFIYDS 799

Query: 186 GLCSDAKVSAIILSNEWALPT 124
           G+  +AKV+ +I ++EW  PT
Sbjct: 800 GMAKNAKVNVLIQNSEWKTPT 820


>ref|XP_002307835.1| predicted protein [Populus trichocarpa] gi|222857284|gb|EEE94831.1|
           predicted protein [Populus trichocarpa]
          Length = 287

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 39/124 (31%), Positives = 57/124 (45%), Gaps = 3/124 (2%)
 Frame = -3

Query: 366 IPVPADCSWIWRKILTLREEA---KSFVHYSIGNGSRTWLWFDPWYKNCNLSSYPSSQMI 196
           +P   DCSW WRK+L LR  A      +   IGNG  T LW+D W  +  L     S++ 
Sbjct: 23  LPKQEDCSWNWRKLLKLRSVAWVLNLLIEVVIGNGKNTHLWWDCWLSHGPLIKTHGSRIA 82

Query: 195 TQSGLCSDAKVSAIILSNEWALPTLNQAEHTDVNLVEWICTFDHNTPKNPSVDDCISWNG 16
            +SGL +DA+V+ +I  + W  P     +  +V      C +    P     +D   W  
Sbjct: 83  MKSGLSADAEVADVIRHSAWCWPNAMPEDMEEVQ-----CAYSLIVPS--EAEDQFIWKL 135

Query: 15  TLEG 4
           T +G
Sbjct: 136 TPDG 139


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