BLASTX nr result

ID: Bupleurum21_contig00031661 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00031661
         (380 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20426.3| unnamed protein product [Vitis vinifera]              151   6e-35
ref|XP_002330381.1| predicted protein [Populus trichocarpa] gi|2...   149   2e-34
ref|XP_002317542.1| predicted protein [Populus trichocarpa] gi|2...   149   3e-34
emb|CAN70179.1| hypothetical protein VITISV_000004 [Vitis vinifera]   149   3e-34
ref|XP_003541097.1| PREDICTED: G-type lectin S-receptor-like ser...   148   4e-34

>emb|CBI20426.3| unnamed protein product [Vitis vinifera]
          Length = 1901

 Score =  151 bits (381), Expect = 6e-35
 Identities = 74/128 (57%), Positives = 98/128 (76%), Gaps = 2/128 (1%)
 Frame = +2

Query: 2    VVWVANRNTPITNTSGIIRVNNKGIVVIISTHNNATIIWSSNYSTSVINNPVAQLLDTGN 181
            VVWVA+R+ P+ ++SGI++++ +G +V+++  N    IWSSN S SV  +PVAQLLDTGN
Sbjct: 1134 VVWVADRDVPLNDSSGILKLDERGTLVLLNKANMT--IWSSNSSRSV-QSPVAQLLDTGN 1190

Query: 182  LVFRDENDK--LNFVWQSFDHPVDNMLPGMKFGVDLVTGQERYHTSWKSDDDPARGSFTH 355
            LV R+END    NF+WQSFD+P D  LPGMK+G +L+TG + Y TSWKS DDP+ G FT+
Sbjct: 1191 LVVRNENDSDPENFLWQSFDYPGDTFLPGMKYGKNLITGLDSYLTSWKSTDDPSTGDFTN 1250

Query: 356  RLDPNGFP 379
            RLDP GFP
Sbjct: 1251 RLDPRGFP 1258



 Score =  133 bits (334), Expect = 2e-29
 Identities = 67/128 (52%), Positives = 94/128 (73%), Gaps = 2/128 (1%)
 Frame = +2

Query: 2   VVWVANRNTPITNTSGIIRVNNKGIVVIISTHNNATIIWSSNYSTSVINNPVAQLLDTGN 181
           VVWVAN + P+T++ G+++V ++G +VI++  N+  IIWSSN S S   NP AQLL++GN
Sbjct: 73  VVWVANGDFPLTDSLGVLKVTDQGTLVILNGTNS--IIWSSNASRSA-QNPTAQLLESGN 129

Query: 182 LVFRDENDK--LNFVWQSFDHPVDNMLPGMKFGVDLVTGQERYHTSWKSDDDPARGSFTH 355
           LV ++ ND    NF+WQSFDHP   +LP MK G +  TGQE Y +S KS DDP++G+ T+
Sbjct: 130 LVLKNGNDDDPENFLWQSFDHPCSTLLPNMKLGRNKSTGQEWYLSSSKSTDDPSKGNLTY 189

Query: 356 RLDPNGFP 379
           RLDP+G+P
Sbjct: 190 RLDPHGYP 197


>ref|XP_002330381.1| predicted protein [Populus trichocarpa] gi|222871766|gb|EEF08897.1|
           predicted protein [Populus trichocarpa]
          Length = 831

 Score =  149 bits (377), Expect = 2e-34
 Identities = 74/128 (57%), Positives = 94/128 (73%), Gaps = 2/128 (1%)
 Frame = +2

Query: 2   VVWVANRNTPITNTSGIIRVNNKGIVVIISTHNNATIIWSSNYSTSVINNPVAQLLDTGN 181
           VVWVANRNTP+ ++SG+++  + G +  I++ N    IWSSN S + IN PVAQLLDTGN
Sbjct: 79  VVWVANRNTPLNDSSGMLKFVDHGNLAFINSTNGT--IWSSNISRAAIN-PVAQLLDTGN 135

Query: 182 LVFRDENDK--LNFVWQSFDHPVDNMLPGMKFGVDLVTGQERYHTSWKSDDDPARGSFTH 355
           LV R END    NF+WQSFD+P D+ LPGMK+G+  VTG  RY TSWKS  DP+ G +T+
Sbjct: 136 LVVRAENDNDPENFLWQSFDYPGDSFLPGMKYGISFVTGLNRYLTSWKSPSDPSTGKYTN 195

Query: 356 RLDPNGFP 379
           +LDPNG P
Sbjct: 196 KLDPNGLP 203


>ref|XP_002317542.1| predicted protein [Populus trichocarpa] gi|222860607|gb|EEE98154.1|
           predicted protein [Populus trichocarpa]
          Length = 315

 Score =  149 bits (375), Expect = 3e-34
 Identities = 73/127 (57%), Positives = 96/127 (75%), Gaps = 1/127 (0%)
 Frame = +2

Query: 2   VVWVANRNTPITNTSGIIRVNNKGIVVIISTHNNATIIWSSNYSTSVINNPVAQLLDTGN 181
           +VWVANR TP+ ++SG++R+ + GI+VI++   N TIIWSSN S S  +NP AQLLD+GN
Sbjct: 73  IVWVANRETPLNDSSGVLRLTDLGILVILN--QNGTIIWSSNSSRSA-SNPAAQLLDSGN 129

Query: 182 LVFRDENDKL-NFVWQSFDHPVDNMLPGMKFGVDLVTGQERYHTSWKSDDDPARGSFTHR 358
           LV ++E D L N +WQSF+HP D +LPGMK G + +TG E Y TSWKS DDP+RG+FT  
Sbjct: 130 LVVKEEGDSLENSLWQSFEHPTDTILPGMKLGRNRITGMEWYMTSWKSPDDPSRGNFTCI 189

Query: 359 LDPNGFP 379
           L P G+P
Sbjct: 190 LIPYGYP 196


>emb|CAN70179.1| hypothetical protein VITISV_000004 [Vitis vinifera]
          Length = 776

 Score =  149 bits (375), Expect = 3e-34
 Identities = 69/128 (53%), Positives = 97/128 (75%), Gaps = 2/128 (1%)
 Frame = +2

Query: 2   VVWVANRNTPITNTSGIIRVNNKGIVVIISTHNNATIIWSSNYSTSVINNPVAQLLDTGN 181
           VVWVANR  P+ ++SG+++V ++G + I++  N   I+WSSN S S   NP AQLLD+GN
Sbjct: 69  VVWVANREIPLNDSSGVLKVTDQGTLAILNGSNTNFILWSSNSSRSA-RNPTAQLLDSGN 127

Query: 182 LVFRDENDKL--NFVWQSFDHPVDNMLPGMKFGVDLVTGQERYHTSWKSDDDPARGSFTH 355
           LV +D ND    NF+WQSFD+P + +LPGMK G + VTG +RY ++WKS DDP++G+FT+
Sbjct: 128 LVMKDGNDDNPENFLWQSFDYPCNTLLPGMKLGRNTVTGLDRYLSAWKSVDDPSKGNFTY 187

Query: 356 RLDPNGFP 379
           RLDP+G+P
Sbjct: 188 RLDPSGYP 195


>ref|XP_003541097.1| PREDICTED: G-type lectin S-receptor-like serine/threonine-protein
           kinase At4g27290-like [Glycine max]
          Length = 785

 Score =  148 bits (374), Expect = 4e-34
 Identities = 67/128 (52%), Positives = 98/128 (76%), Gaps = 2/128 (1%)
 Frame = +2

Query: 2   VVWVANRNTPITNTSGIIRVNNKGIVVIISTHNNATIIWSSNYSTSVINNPVAQLLDTGN 181
           VVWVANR  P+ N SG++++  +G+++I+++ N+   IW SN  +S + NP+AQLLD+GN
Sbjct: 73  VVWVANREKPVYNKSGVLKLEERGVLMILNSTNST--IWRSNNISSTVKNPIAQLLDSGN 130

Query: 182 LVFRDEND--KLNFVWQSFDHPVDNMLPGMKFGVDLVTGQERYHTSWKSDDDPARGSFTH 355
           LV R+E D  + NF+WQSFD+P D  LPGMK G +LVTGQ+R+ +SWKS+DDPA+G ++ 
Sbjct: 131 LVVRNERDINEDNFLWQSFDYPCDTFLPGMKLGWNLVTGQDRFLSSWKSEDDPAKGDYSL 190

Query: 356 RLDPNGFP 379
           +LD  G+P
Sbjct: 191 KLDLRGYP 198


Top