BLASTX nr result

ID: Bupleurum21_contig00031653 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00031653
         (284 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002327129.1| predicted protein [Populus trichocarpa] gi|2...    64   2e-08
ref|XP_002510246.1| zinc finger protein, putative [Ricinus commu...    63   2e-08
emb|CBI26313.3| unnamed protein product [Vitis vinifera]               62   5e-08
ref|XP_002283454.1| PREDICTED: DPH4 homolog isoform 3 [Vitis vin...    62   5e-08
ref|XP_003538970.1| PREDICTED: diphthamide biosynthesis protein ...    58   7e-07

>ref|XP_002327129.1| predicted protein [Populus trichocarpa] gi|222835444|gb|EEE73879.1|
           predicted protein [Populus trichocarpa]
          Length = 182

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 27/45 (60%), Positives = 37/45 (82%)
 Frame = -2

Query: 148 SMTRTHYDILGIKDDATYEEISTSYRSSILNYHPDKVQKSAQISN 14
           S+  T+YD+L +K+DA+Y EI TSYRS+ILNYHPDK+Q + Q S+
Sbjct: 7   SIRETYYDVLSVKEDASYVEIRTSYRSAILNYHPDKLQNTRQASD 51


>ref|XP_002510246.1| zinc finger protein, putative [Ricinus communis]
           gi|223550947|gb|EEF52433.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 182

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 27/45 (60%), Positives = 37/45 (82%)
 Frame = -2

Query: 148 SMTRTHYDILGIKDDATYEEISTSYRSSILNYHPDKVQKSAQISN 14
           S+  THYDIL +K+DA+YEEI TSYR S+LN+HPDK+Q + + S+
Sbjct: 7   SVQETHYDILSVKEDASYEEIRTSYRLSLLNHHPDKLQSAHRTSD 51


>emb|CBI26313.3| unnamed protein product [Vitis vinifera]
          Length = 62

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 27/46 (58%), Positives = 37/46 (80%)
 Frame = -2

Query: 148 SMTRTHYDILGIKDDATYEEISTSYRSSILNYHPDKVQKSAQISNS 11
           S  +T+YDIL +K+DA+YEEI   YRS+ILN HPDK+QK+ + SN+
Sbjct: 7   SFEQTYYDILSVKEDASYEEIRGCYRSAILNSHPDKLQKTTETSNT 52


>ref|XP_002283454.1| PREDICTED: DPH4 homolog isoform 3 [Vitis vinifera]
           gi|225432794|ref|XP_002283447.1| PREDICTED: DPH4 homolog
           isoform 2 [Vitis vinifera]
           gi|225432796|ref|XP_002283441.1| PREDICTED: DPH4 homolog
           isoform 1 [Vitis vinifera]
          Length = 182

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 27/46 (58%), Positives = 37/46 (80%)
 Frame = -2

Query: 148 SMTRTHYDILGIKDDATYEEISTSYRSSILNYHPDKVQKSAQISNS 11
           S  +T+YDIL +K+DA+YEEI   YRS+ILN HPDK+QK+ + SN+
Sbjct: 7   SFEQTYYDILSVKEDASYEEIRGCYRSAILNSHPDKLQKTTETSNT 52


>ref|XP_003538970.1| PREDICTED: diphthamide biosynthesis protein 4-like [Glycine max]
          Length = 178

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 23/42 (54%), Positives = 35/42 (83%)
 Frame = -2

Query: 136 THYDILGIKDDATYEEISTSYRSSILNYHPDKVQKSAQISNS 11
           THY++L +K+DA YEEI  SYRS++L+ HPDK+ K+++ S+S
Sbjct: 11  THYEVLNVKEDANYEEIRASYRSAVLSLHPDKLLKTSETSSS 52


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