BLASTX nr result

ID: Bupleurum21_contig00031638 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00031638
         (381 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAA71369.1| chloride channel Stclc1 [Solanum tuberosum]           173   1e-41
gb|ADF30876.1| chloride channel protein [Citrus trifoliata]           164   9e-39
ref|XP_002328727.1| Cl-channel clc-7 [Populus trichocarpa] gi|22...   162   3e-38
emb|CBI29647.3| unnamed protein product [Vitis vinifera]              159   2e-37
ref|XP_002268066.1| PREDICTED: chloride channel protein CLC-c [V...   159   2e-37

>emb|CAA71369.1| chloride channel Stclc1 [Solanum tuberosum]
          Length = 764

 Score =  173 bits (438), Expect = 1e-41
 Identities = 85/126 (67%), Positives = 97/126 (76%)
 Frame = -3

Query: 379 PYMSNLVAGDVVSGPLMSFTGVEKVGNIYHALKMTRHHGFPVIDETPFVSAPEXXXXXXX 200
           P+M NLVAGDV SGPL+SF+GVEKVGNI HALK TRH+GFPVIDE PF   PE       
Sbjct: 577 PFMRNLVAGDVCSGPLLSFSGVEKVGNIVHALKYTRHNGFPVIDEPPFSETPELCGLVLR 636

Query: 199 XXXXXXLNGKRFTKQRELTGKDMLNRFHASDFAKPGPGKGLKLIDLELTQEEMEMYVDLH 20
                 LNGK+FTKQR L+  ++L+RFHA DFAKPG GKGLK  DL +T+EEMEMY+DLH
Sbjct: 637 SHLLVLLNGKKFTKQRVLSASNILSRFHAFDFAKPGSGKGLKFEDLVITEEEMEMYIDLH 696

Query: 19  PITNTS 2
           PITNTS
Sbjct: 697 PITNTS 702


>gb|ADF30876.1| chloride channel protein [Citrus trifoliata]
          Length = 789

 Score =  164 bits (414), Expect = 9e-39
 Identities = 79/126 (62%), Positives = 95/126 (75%)
 Frame = -3

Query: 379 PYMSNLVAGDVVSGPLMSFTGVEKVGNIYHALKMTRHHGFPVIDETPFVSAPEXXXXXXX 200
           PYM NLVA DVVSGPL++F+GVEKVGNI HAL++TRH+GFPVIDE P   APE       
Sbjct: 601 PYMKNLVASDVVSGPLITFSGVEKVGNIMHALRLTRHNGFPVIDEPPLTPAPELCGLVLR 660

Query: 199 XXXXXXLNGKRFTKQRELTGKDMLNRFHASDFAKPGPGKGLKLIDLELTQEEMEMYVDLH 20
                 L GK+FTKQ+ + G D++ RF A DFAK G GKG+KL DL++ +EEMEM+VDLH
Sbjct: 661 SHLLVLLKGKKFTKQKTMAGSDIMRRFKAHDFAKAGSGKGVKLEDLDIEEEEMEMFVDLH 720

Query: 19  PITNTS 2
           PITNTS
Sbjct: 721 PITNTS 726


>ref|XP_002328727.1| Cl-channel clc-7 [Populus trichocarpa] gi|222839025|gb|EEE77376.1|
           Cl-channel clc-7 [Populus trichocarpa]
          Length = 743

 Score =  162 bits (409), Expect = 3e-38
 Identities = 79/126 (62%), Positives = 94/126 (74%)
 Frame = -3

Query: 379 PYMSNLVAGDVVSGPLMSFTGVEKVGNIYHALKMTRHHGFPVIDETPFVSAPEXXXXXXX 200
           PYM +L+A DVVSGPL+SF+GVEKVGNI H L++TRH+GFPVIDE P+  APE       
Sbjct: 556 PYMRHLIASDVVSGPLVSFSGVEKVGNILHVLRVTRHNGFPVIDEPPYSDAPELCGLVLR 615

Query: 199 XXXXXXLNGKRFTKQRELTGKDMLNRFHASDFAKPGPGKGLKLIDLELTQEEMEMYVDLH 20
                 L GK+FTKQR  TG D++  F A DFAK G GKG+KL DLE+T+EEMEMY+DLH
Sbjct: 616 SHLLVLLKGKKFTKQRVKTGSDIVRGFKAHDFAKAGSGKGVKLEDLEITEEEMEMYIDLH 675

Query: 19  PITNTS 2
           PI NTS
Sbjct: 676 PIANTS 681


>emb|CBI29647.3| unnamed protein product [Vitis vinifera]
          Length = 742

 Score =  159 bits (402), Expect = 2e-37
 Identities = 79/126 (62%), Positives = 92/126 (73%)
 Frame = -3

Query: 379 PYMSNLVAGDVVSGPLMSFTGVEKVGNIYHALKMTRHHGFPVIDETPFVSAPEXXXXXXX 200
           PYM +LVA DVVSGPL++F+ +EKVGNI HALK T HHGFPVIDE PF  APE       
Sbjct: 555 PYMRHLVAKDVVSGPLITFSSIEKVGNILHALKTTGHHGFPVIDEPPFTDAPELCGLVLK 614

Query: 199 XXXXXXLNGKRFTKQRELTGKDMLNRFHASDFAKPGPGKGLKLIDLELTQEEMEMYVDLH 20
                 L GK+F+K R L G ++L  F A+DFAK G GKG+KL DL++T EEMEMYVDLH
Sbjct: 615 SHLLVLLKGKKFSKTRMLVGSEILKTFEANDFAKAGSGKGVKLEDLDITAEEMEMYVDLH 674

Query: 19  PITNTS 2
           PITNTS
Sbjct: 675 PITNTS 680


>ref|XP_002268066.1| PREDICTED: chloride channel protein CLC-c [Vitis vinifera]
           gi|301318128|gb|ADK66979.1| chloride channel ClC1 [Vitis
           vinifera]
          Length = 771

 Score =  159 bits (402), Expect = 2e-37
 Identities = 79/126 (62%), Positives = 92/126 (73%)
 Frame = -3

Query: 379 PYMSNLVAGDVVSGPLMSFTGVEKVGNIYHALKMTRHHGFPVIDETPFVSAPEXXXXXXX 200
           PYM +LVA DVVSGPL++F+ +EKVGNI HALK T HHGFPVIDE PF  APE       
Sbjct: 584 PYMRHLVAKDVVSGPLITFSSIEKVGNILHALKTTGHHGFPVIDEPPFTDAPELCGLVLK 643

Query: 199 XXXXXXLNGKRFTKQRELTGKDMLNRFHASDFAKPGPGKGLKLIDLELTQEEMEMYVDLH 20
                 L GK+F+K R L G ++L  F A+DFAK G GKG+KL DL++T EEMEMYVDLH
Sbjct: 644 SHLLVLLKGKKFSKTRMLVGSEILKTFEANDFAKAGSGKGVKLEDLDITAEEMEMYVDLH 703

Query: 19  PITNTS 2
           PITNTS
Sbjct: 704 PITNTS 709


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