BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00031613
         (515 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002325119.1| predicted protein [Populus trichocarpa] gi|2...   296   2e-78
sp|P69242.1|RPOT3_NICSY RecName: Full=DNA-directed RNA polymeras...   295   3e-78
ref|XP_002308414.1| predicted protein [Populus trichocarpa] gi|2...   294   6e-78
emb|CBI36559.3| unnamed protein product [Vitis vinifera]              292   2e-77
ref|XP_002274521.1| PREDICTED: DNA-directed RNA polymerase 3, ch...   292   2e-77

>ref|XP_002325119.1| predicted protein [Populus trichocarpa] gi|222866553|gb|EEF03684.1|
           predicted protein [Populus trichocarpa]
          Length = 882

 Score =  296 bits (757), Expect = 2e-78
 Identities = 137/171 (80%), Positives = 154/171 (90%), Gaps = 1/171 (0%)
 Frame = +1

Query: 1   LGNTKWRINRKVLGVVENIWSGGGNIAGLVNREDVPVPVL-QSDDLTATKEWKWGVRRAK 177
           LGNTKWR+NR++L VVE IW+ GGNIAGLV+RED+P+P    SDDLT  ++WKW VR+AK
Sbjct: 366 LGNTKWRVNRRLLDVVERIWTSGGNIAGLVDREDIPIPEKPSSDDLTEIQKWKWSVRKAK 425

Query: 178 KVNQERHSLRCDIELKLSVARKLKEEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVL 357
           K+NQERHS RCD ELKLSVARKLK+EEGFYYPHNLDFRGRAYPMHPHL HLSSDLCRGVL
Sbjct: 426 KINQERHSQRCDTELKLSVARKLKDEEGFYYPHNLDFRGRAYPMHPHLTHLSSDLCRGVL 485

Query: 358 EFAEGRPLGKSGFRWLKIHLANLYGGGVEKLSYDGRLAFVENHMTQIVNSA 510
           EF EGRPLGKSG RWLKIHLANLY GGVEKLS+DGRLAFVENH+++I +SA
Sbjct: 486 EFEEGRPLGKSGLRWLKIHLANLYSGGVEKLSHDGRLAFVENHLSEIFDSA 536


>sp|P69242.1|RPOT3_NICSY RecName: Full=DNA-directed RNA polymerase 3, chloroplastic;
           AltName: Full=NsRpoT-C; AltName: Full=T7
           bacteriophage-type single subunit RNA polymerase 3;
           Flags: Precursor gi|59800203|sp|P69243.1|RPO3A_TOBAC
           RecName: Full=DNA-directed RNA polymerase 3A,
           chloroplastic; AltName: Full=NictaRpoT3-syl; AltName:
           Full=T7 bacteriophage-type single subunit RNA polymerase
           3A; Flags: Precursor gi|21425641|emb|CAC82576.3|
           phage-type RNA polymerase [Nicotiana sylvestris]
           gi|21425679|emb|CAC95027.2| plastid RNA polymerase
           [Nicotiana tabacum] gi|24475541|dbj|BAC22693.1| T7
           bacteriophage-type single subunit RNA polymerase
           [Nicotiana sylvestris] gi|24475543|dbj|BAC22694.1| T7
           bacteriophage-type single subunit RNA polymerase
           [Nicotiana sylvestris]
          Length = 977

 Score =  295 bits (755), Expect = 3e-78
 Identities = 132/171 (77%), Positives = 155/171 (90%)
 Frame = +1

Query: 1   LGNTKWRINRKVLGVVENIWSGGGNIAGLVNREDVPVPVLQSDDLTATKEWKWGVRRAKK 180
           LG+TKWR+N+++L VVE+IW+GGGNIAGLV+R+DVP+P L SDD+   K+WKW VR++KK
Sbjct: 462 LGSTKWRVNKRILSVVESIWAGGGNIAGLVDRKDVPIPELHSDDIMEVKKWKWRVRKSKK 521

Query: 181 VNQERHSLRCDIELKLSVARKLKEEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLE 360
           +NQE HS RCD ELKLSVARKLK+EEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRG+LE
Sbjct: 522 INQELHSQRCDTELKLSVARKLKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILE 581

Query: 361 FAEGRPLGKSGFRWLKIHLANLYGGGVEKLSYDGRLAFVENHMTQIVNSAD 513
           FAEGRPLGKSG RWLKIHLA+LY GG+EKL YD RLAFVENH+  I++SA+
Sbjct: 582 FAEGRPLGKSGLRWLKIHLASLYAGGIEKLCYDARLAFVENHIDDILDSAN 632


>ref|XP_002308414.1| predicted protein [Populus trichocarpa] gi|222854390|gb|EEE91937.1|
           predicted protein [Populus trichocarpa]
          Length = 982

 Score =  294 bits (752), Expect = 6e-78
 Identities = 138/172 (80%), Positives = 153/172 (88%), Gaps = 1/172 (0%)
 Frame = +1

Query: 1   LGNTKWRINRKVLGVVENIWSGGGNIAGLVNREDVPVPV-LQSDDLTATKEWKWGVRRAK 177
           LGNTKWR+N KVL VVE IW+ GGN AGLVNR D+P+P  L SDDLT  ++WKW VR+AK
Sbjct: 466 LGNTKWRVNGKVLDVVERIWASGGNNAGLVNRGDIPIPEKLSSDDLTEIQKWKWSVRKAK 525

Query: 178 KVNQERHSLRCDIELKLSVARKLKEEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVL 357
           K+NQERHS RCD ELKLSVARKLK+EEGFYYPHNLDFRGRAYPMHPHL HLSSDLCRGVL
Sbjct: 526 KINQERHSQRCDTELKLSVARKLKDEEGFYYPHNLDFRGRAYPMHPHLTHLSSDLCRGVL 585

Query: 358 EFAEGRPLGKSGFRWLKIHLANLYGGGVEKLSYDGRLAFVENHMTQIVNSAD 513
           EFAEGRPLGKSG  WLKIHLANLY GGVEKLS+DGRLAFVENH+++I +SA+
Sbjct: 586 EFAEGRPLGKSGLCWLKIHLANLYSGGVEKLSHDGRLAFVENHLSEIFDSAE 637


>emb|CBI36559.3| unnamed protein product [Vitis vinifera]
          Length = 808

 Score =  292 bits (747), Expect = 2e-77
 Identities = 135/172 (78%), Positives = 153/172 (88%), Gaps = 1/172 (0%)
 Frame = +1

Query: 1   LGNTKWRINRKVLGVVENIWSGGGNIAGLVNREDVPVPVLQS-DDLTATKEWKWGVRRAK 177
           LGNTKWRINR+VL VVE+IW+ GGN+ GLV+RE+VP+P   S +DLT  + WKW  R+AK
Sbjct: 292 LGNTKWRINRRVLSVVESIWARGGNLGGLVDRENVPLPEKPSTEDLTEIQNWKWNARKAK 351

Query: 178 KVNQERHSLRCDIELKLSVARKLKEEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVL 357
           K+NQERHSLRCD E+KLSVARK+K+EEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVL
Sbjct: 352 KINQERHSLRCDTEIKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVL 411

Query: 358 EFAEGRPLGKSGFRWLKIHLANLYGGGVEKLSYDGRLAFVENHMTQIVNSAD 513
           EFAEGRPLGKSG RWLKI LANLY GGVEKLSYDGRLAFV+NH+  + +SAD
Sbjct: 412 EFAEGRPLGKSGLRWLKIQLANLYAGGVEKLSYDGRLAFVDNHLDDVFDSAD 463


>ref|XP_002274521.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic [Vitis
           vinifera]
          Length = 979

 Score =  292 bits (747), Expect = 2e-77
 Identities = 135/172 (78%), Positives = 153/172 (88%), Gaps = 1/172 (0%)
 Frame = +1

Query: 1   LGNTKWRINRKVLGVVENIWSGGGNIAGLVNREDVPVPVLQS-DDLTATKEWKWGVRRAK 177
           LGNTKWRINR+VL VVE+IW+ GGN+ GLV+RE+VP+P   S +DLT  + WKW  R+AK
Sbjct: 463 LGNTKWRINRRVLSVVESIWARGGNLGGLVDRENVPLPEKPSTEDLTEIQNWKWNARKAK 522

Query: 178 KVNQERHSLRCDIELKLSVARKLKEEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVL 357
           K+NQERHSLRCD E+KLSVARK+K+EEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVL
Sbjct: 523 KINQERHSLRCDTEIKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVL 582

Query: 358 EFAEGRPLGKSGFRWLKIHLANLYGGGVEKLSYDGRLAFVENHMTQIVNSAD 513
           EFAEGRPLGKSG RWLKI LANLY GGVEKLSYDGRLAFV+NH+  + +SAD
Sbjct: 583 EFAEGRPLGKSGLRWLKIQLANLYAGGVEKLSYDGRLAFVDNHLDDVFDSAD 634