BLASTX nr result

ID: Bupleurum21_contig00031604 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00031604
         (315 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN67735.1| hypothetical protein VITISV_012279 [Vitis vinifera]    57   2e-06
emb|CAN70509.1| hypothetical protein VITISV_027903 [Vitis vinifera]    55   4e-06
emb|CAN64575.1| hypothetical protein VITISV_003432 [Vitis vinifera]    55   6e-06
emb|CAN77213.1| hypothetical protein VITISV_037722 [Vitis vinifera]    55   8e-06
emb|CAN78786.1| hypothetical protein VITISV_006287 [Vitis vinifera]    54   1e-05

>emb|CAN67735.1| hypothetical protein VITISV_012279 [Vitis vinifera]
          Length = 476

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 39/123 (31%), Positives = 57/123 (46%), Gaps = 19/123 (15%)
 Frame = -3

Query: 313 YHEDIGHTTDDCVSLKYFLEKQAKAGNLNQYLPSD------------YPPRGDSSKKPTI 170
           +H++ GHTT+ C  L Y +E+  KAG+L QYL SD              PR  ++ K  I
Sbjct: 242 FHKEHGHTTETCRCLHYLVERLIKAGHLKQYLRSDAGGRDASQNHNSRAPRAPAASKVVI 301

Query: 169 NTIVGGSPPSSDEMETEVYQI-------SHGRNPSECNVITFSDADYEGQSPNRADALVV 11
           N I GG  PS +++ T  YQ+         GR       I F   D         DAL++
Sbjct: 302 NYINGG--PSDEDIGTRAYQLHPAWDNWGEGRPRPIDGTIIFPPVDLTRILQPHRDALIM 359

Query: 10  TID 2
           +++
Sbjct: 360 SLE 362


>emb|CAN70509.1| hypothetical protein VITISV_027903 [Vitis vinifera]
          Length = 549

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 37/113 (32%), Positives = 54/113 (47%), Gaps = 12/113 (10%)
 Frame = -3

Query: 313 YHEDIGHTTDDCVSLKYFLEKQAKAGNLNQYLPSDY------------PPRGDSSKKPTI 170
           +H+D GHTT+ C SL+Y +E+  KAG+L QYL SD              PR   + K  I
Sbjct: 268 FHKDHGHTTETCRSLQYLVERLIKAGHLKQYLRSDTGGRDASQHHNSGAPRAPVAPKAVI 327

Query: 169 NTIVGGSPPSSDEMETEVYQISHGRNPSECNVITFSDADYEGQSPNRADALVV 11
           N I GG  PS +E ++ + +    R  S    I    +   G+ P   D  ++
Sbjct: 328 NYINGG--PSDEEYDSRLKRQKLLRAASIRERINSIRSGLTGEGPRPIDGTII 378


>emb|CAN64575.1| hypothetical protein VITISV_003432 [Vitis vinifera]
          Length = 504

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 38/113 (33%), Positives = 53/113 (46%), Gaps = 12/113 (10%)
 Frame = -3

Query: 313 YHEDIGHTTDDCVSLKYFLEKQAKAGNLNQYLPSDY------------PPRGDSSKKPTI 170
           +H++ GHTT+ C SL+Y +EK  KAG+L QYL SD              PR  ++ K  I
Sbjct: 256 FHKEHGHTTETCRSLQYLVEKLIKAGHLKQYLRSDTKGKVTSQHHNPGAPRAPAAPKAII 315

Query: 169 NTIVGGSPPSSDEMETEVYQISHGRNPSECNVITFSDADYEGQSPNRADALVV 11
           N I GG  PS +E ++   +    R  S C  I        G  P   D  ++
Sbjct: 316 NYINGG--PSDEEYDSRRKRQKLLRVASICERINSIRPGLTGGGPCPIDGTII 366


>emb|CAN77213.1| hypothetical protein VITISV_037722 [Vitis vinifera]
          Length = 342

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 30/77 (38%), Positives = 44/77 (57%), Gaps = 12/77 (15%)
 Frame = -3

Query: 313 YHEDIGHTTDDCVSLKYFLEKQAKAGNLNQYLPSDY------------PPRGDSSKKPTI 170
           +H++ GHTT++C  L Y +EK  +AG+L QYLPSD              PR  ++ K  I
Sbjct: 268 FHKEHGHTTEECRCLHYLVEKLIRAGHLKQYLPSDAGGKNASQNHNTGAPRAPATPKVVI 327

Query: 169 NTIVGGSPPSSDEMETE 119
           N I GG  PS +E +++
Sbjct: 328 NYINGG--PSDEEYDSK 342


>emb|CAN78786.1| hypothetical protein VITISV_006287 [Vitis vinifera]
          Length = 525

 Score = 54.3 bits (129), Expect = 1e-05
 Identities = 37/113 (32%), Positives = 54/113 (47%), Gaps = 12/113 (10%)
 Frame = -3

Query: 313 YHEDIGHTTDDCVSLKYFLEKQAKAGNLNQYLPSDY------------PPRGDSSKKPTI 170
           +H++ GHTT+ C SL+Y +EK  KAG+L QYL SD              PR  ++ K  I
Sbjct: 268 FHKEHGHTTETCRSLQYLVEKLIKAGHLKQYLRSDTEGKFTSQHHNPGAPRAPAAPKAVI 327

Query: 169 NTIVGGSPPSSDEMETEVYQISHGRNPSECNVITFSDADYEGQSPNRADALVV 11
           N I GG  PS +E ++   +    R  S    I        G+ P+  D  ++
Sbjct: 328 NYINGG--PSDEEYDSRRKRQKSLRAASIRERINSIWPGLTGEGPHPIDGTII 378


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