BLASTX nr result

ID: Bupleurum21_contig00031560 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00031560
         (723 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530552.1| hypothetical protein RCOM_1267370 [Ricinus c...   159   4e-37
ref|XP_002268864.2| PREDICTED: gem-associated protein 2-like [Vi...   152   7e-35
emb|CBI39169.3| unnamed protein product [Vitis vinifera]              152   7e-35
ref|XP_003592831.1| Survival of motor neuron protein-interacting...   145   1e-32
ref|XP_002310453.1| predicted protein [Populus trichocarpa] gi|2...   143   4e-32

>ref|XP_002530552.1| hypothetical protein RCOM_1267370 [Ricinus communis]
            gi|223529914|gb|EEF31843.1| hypothetical protein
            RCOM_1267370 [Ricinus communis]
          Length = 757

 Score =  159 bits (403), Expect = 4e-37
 Identities = 87/176 (49%), Positives = 117/176 (66%), Gaps = 6/176 (3%)
 Frame = +3

Query: 15   NETGSVNYNMQFSAMDEDDAAPTIVTTEDI------SNNNPDLSTIKCSLQSAPDDEDDS 176
            + +  ++Y +Q   +D +    +    EDI      +    ++ + +    S PD+  D 
Sbjct: 570  DSSSEISYKLQSIDIDHEQNTSSHQLDEDIIVEKFANLRTDEVHSYRLLEDSCPDNIIDQ 629

Query: 177  APTISSPKTLTTQDIANSPTLSSVLGLEPVARVSMLKKRIKLAEQMTTLSKDDCVWLFAL 356
            A   S  KT  +    N PT+S++L ++ VARVSML+KRI LAE M TLSK+DCVWLFAL
Sbjct: 630  A---SVAKTGDSDSSRNYPTMSAILAMDSVARVSMLRKRISLAETMNTLSKNDCVWLFAL 686

Query: 357  CAAIDTPLNADTSAALRDLLRKCASLRAQKLDLDDEVVMLNILATISGKYFGQSDI 524
            CAA+DTPL+ADT AALR LLRKCAS+RA K +LDDEV+MLNIL  ISG+YFGQS++
Sbjct: 687  CAAVDTPLDADTCAALRSLLRKCASIRAVKSELDDEVIMLNILIAISGRYFGQSEL 742


>ref|XP_002268864.2| PREDICTED: gem-associated protein 2-like [Vitis vinifera]
          Length = 314

 Score =  152 bits (384), Expect = 7e-35
 Identities = 80/145 (55%), Positives = 104/145 (71%)
 Frame = +3

Query: 87  VTTEDISNNNPDLSTIKCSLQSAPDDEDDSAPTISSPKTLTTQDIANSPTLSSVLGLEPV 266
           + ++ +  +NP  S  +  L    +D+   +P  SSP+T   +   N P LS +LG++ V
Sbjct: 172 IDSQPLDCSNPKNSDKRLPLSIINEDDTSLSPENSSPRT---ESSGNYPLLSVILGMDSV 228

Query: 267 ARVSMLKKRIKLAEQMTTLSKDDCVWLFALCAAIDTPLNADTSAALRDLLRKCASLRAQK 446
           ARVSML+K I   E  +TLS+ DC+WLFALCAAIDTPL+ADT AALR LLRKCASLRA+K
Sbjct: 229 ARVSMLRKCINSLETKSTLSRSDCMWLFALCAAIDTPLHADTCAALRSLLRKCASLRAEK 288

Query: 447 LDLDDEVVMLNILATISGKYFGQSD 521
            +LDDEVVMLNIL TI+G+YF QS+
Sbjct: 289 SELDDEVVMLNILVTIAGRYFKQSE 313


>emb|CBI39169.3| unnamed protein product [Vitis vinifera]
          Length = 657

 Score =  152 bits (384), Expect = 7e-35
 Identities = 80/145 (55%), Positives = 104/145 (71%)
 Frame = +3

Query: 87  VTTEDISNNNPDLSTIKCSLQSAPDDEDDSAPTISSPKTLTTQDIANSPTLSSVLGLEPV 266
           + ++ +  +NP  S  +  L    +D+   +P  SSP+T   +   N P LS +LG++ V
Sbjct: 515 IDSQPLDCSNPKNSDKRLPLSIINEDDTSLSPENSSPRT---ESSGNYPLLSVILGMDSV 571

Query: 267 ARVSMLKKRIKLAEQMTTLSKDDCVWLFALCAAIDTPLNADTSAALRDLLRKCASLRAQK 446
           ARVSML+K I   E  +TLS+ DC+WLFALCAAIDTPL+ADT AALR LLRKCASLRA+K
Sbjct: 572 ARVSMLRKCINSLETKSTLSRSDCMWLFALCAAIDTPLHADTCAALRSLLRKCASLRAEK 631

Query: 447 LDLDDEVVMLNILATISGKYFGQSD 521
            +LDDEVVMLNIL TI+G+YF QS+
Sbjct: 632 SELDDEVVMLNILVTIAGRYFKQSE 656


>ref|XP_003592831.1| Survival of motor neuron protein-interacting protein [Medicago
           truncatula] gi|355481879|gb|AES63082.1| Survival of
           motor neuron protein-interacting protein [Medicago
           truncatula]
          Length = 521

 Score =  145 bits (365), Expect = 1e-32
 Identities = 75/149 (50%), Positives = 101/149 (67%), Gaps = 3/149 (2%)
 Frame = +3

Query: 84  IVTTEDISNNNPDLSTIKCSLQSAPDDEDDSAPT---ISSPKTLTTQDIANSPTLSSVLG 254
           ++  + + +NN  +            DED + P    +       T    ++P +S++LG
Sbjct: 372 VMNRDVLLHNNASIGKADQPSNLTAKDEDSTMPPENPVLKRSIDQTSSSCSTPLVSAILG 431

Query: 255 LEPVARVSMLKKRIKLAEQMTTLSKDDCVWLFALCAAIDTPLNADTSAALRDLLRKCASL 434
           ++ VARVSML KRI+L E   T+++ DC+WLFALCAA+D PL+ADT AALR LLRKCAS+
Sbjct: 432 MDSVARVSMLLKRIRLLEPENTITRIDCMWLFALCAAVDAPLDADTCAALRSLLRKCASI 491

Query: 435 RAQKLDLDDEVVMLNILATISGKYFGQSD 521
           RA K +LDDEVVMLNILATISG+YFGQS+
Sbjct: 492 RAGKAELDDEVVMLNILATISGRYFGQSE 520


>ref|XP_002310453.1| predicted protein [Populus trichocarpa] gi|222853356|gb|EEE90903.1|
           predicted protein [Populus trichocarpa]
          Length = 242

 Score =  143 bits (360), Expect = 4e-32
 Identities = 71/108 (65%), Positives = 87/108 (80%)
 Frame = +3

Query: 192 SPKTLTTQDIANSPTLSSVLGLEPVARVSMLKKRIKLAEQMTTLSKDDCVWLFALCAAID 371
           +P+  ++  + N PTL  +L ++ VARVSML++ IKLAE    LSK+DCVWLFALCAA+D
Sbjct: 135 TPEASSSDALCNYPTLPVILAMDSVARVSMLRRCIKLAETTDALSKNDCVWLFALCAAVD 194

Query: 372 TPLNADTSAALRDLLRKCASLRAQKLDLDDEVVMLNILATISGKYFGQ 515
            PL+A T AALR LLRKCASLRA K +LDDEV+MLNILATISG+YFGQ
Sbjct: 195 APLDAGTCAALRGLLRKCASLRAGKSELDDEVIMLNILATISGRYFGQ 242


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