BLASTX nr result

ID: Bupleurum21_contig00031543 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00031543
         (588 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512697.1| hypothetical protein RCOM_1438750 [Ricinus c...   123   2e-26
ref|NP_199603.1| uncharacterized protein [Arabidopsis thaliana] ...   108   5e-22
ref|XP_002268562.1| PREDICTED: uncharacterized protein LOC100267...   108   7e-22
ref|XP_002304626.1| predicted protein [Populus trichocarpa] gi|2...   104   1e-20
ref|XP_002512796.1| conserved hypothetical protein [Ricinus comm...    98   1e-18

>ref|XP_002512697.1| hypothetical protein RCOM_1438750 [Ricinus communis]
           gi|223548658|gb|EEF50149.1| hypothetical protein
           RCOM_1438750 [Ricinus communis]
          Length = 170

 Score =  123 bits (309), Expect = 2e-26
 Identities = 75/164 (45%), Positives = 96/164 (58%)
 Frame = -2

Query: 494 MKPIISVLSSIAKGKWGTIKSKTESLKAKLIIFSLLKPKHLPALGAISHKIHALVGGGTS 315
           +K I++++SS+AK K   IKSKT ++KA+LI+FS++K K +  LG+IS KIH ++G    
Sbjct: 9   LKQIVALVSSVAKAKSLAIKSKTSAVKARLIMFSMMKSKKV-LLGSISDKIHTILGQDEK 67

Query: 314 SSQQEQPHHXXXXXXXXXXXXXVXXXXXXXXXXXXXXXXNKYPDLRHCLFXXXXXXXDPN 135
             Q E                                   KYPDLRH LF       DP 
Sbjct: 68  DRQYENGEEQSKAIVLYNNALADEDD--------------KYPDLRHTLFDEEEEFNDPG 113

Query: 134 ASVIDQVRNSKQEEGHDFSLEDEIDHVADLFINKFHKRMRIQKL 3
            SVID V+NSK +EG DFSLEDEIDHVADLFI +FHK+MR+QKL
Sbjct: 114 GSVIDLVKNSK-DEGEDFSLEDEIDHVADLFIMRFHKQMRLQKL 156


>ref|NP_199603.1| uncharacterized protein [Arabidopsis thaliana]
           gi|10177928|dbj|BAB11339.1| unnamed protein product
           [Arabidopsis thaliana] gi|26449488|dbj|BAC41870.1|
           unknown protein [Arabidopsis thaliana]
           gi|332008211|gb|AED95594.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 187

 Score =  108 bits (271), Expect = 5e-22
 Identities = 69/169 (40%), Positives = 92/169 (54%), Gaps = 5/169 (2%)
 Frame = -2

Query: 494 MKPIISVLSSIAKGKWGTIKSKTESLKAKLIIFSLLKPKHLPALGAISHKIHALVGGGTS 315
           MK I+++LSS+AK K   IK+KT + K ++++ SL+K K L    +IS+KIH L+G    
Sbjct: 8   MKHIVALLSSMAKAKSIAIKNKTSAFKTRVLMLSLVKHKKL-GFRSISNKIHHLLGHADQ 66

Query: 314 SSQQEQPHHXXXXXXXXXXXXXVXXXXXXXXXXXXXXXXNKYPDLRHCLFXXXXXXXD-- 141
               +Q                                  KYPDLRH LF       D  
Sbjct: 67  DDDNDQDQDKNKAIVLYNSKASTMAHHEEYDVHEEESD--KYPDLRHTLFEGEEDFGDLE 124

Query: 140 ---PNASVIDQVRNSKQEEGHDFSLEDEIDHVADLFINKFHKRMRIQKL 3
                +SVID VR SK+EEG +F LEDEIDHVADLFI++FHK+M++QKL
Sbjct: 125 EEGQGSSVIDMVRTSKEEEGENFKLEDEIDHVADLFISRFHKQMKLQKL 173


>ref|XP_002268562.1| PREDICTED: uncharacterized protein LOC100267772 [Vitis vinifera]
          Length = 189

 Score =  108 bits (270), Expect = 7e-22
 Identities = 70/170 (41%), Positives = 95/170 (55%), Gaps = 6/170 (3%)
 Frame = -2

Query: 494 MKPIISVLSSIAKGKWGTIKSKTESLKAKLIIFSLLKPKHLPALGAISHKIHALVG--GG 321
           +K II++L+SIAK K   +KSKT +LK+++++FS L+ K +  L +IS KIH+++G  GG
Sbjct: 9   LKQIIALLTSIAKTKSMAVKSKTSALKSRILMFSFLRSKKV-LLHSISEKIHSILGQHGG 67

Query: 320 TSSSQQEQPH----HXXXXXXXXXXXXXVXXXXXXXXXXXXXXXXNKYPDLRHCLFXXXX 153
                ++       H             V                 KYPDL HCLF    
Sbjct: 68  EDEVGEQSKAVVVLHSEVEWSPSRMYQVVERAEDDDDNGINNDDDGKYPDLTHCLFEEEE 127

Query: 152 XXXDPNASVIDQVRNSKQEEGHDFSLEDEIDHVADLFINKFHKRMRIQKL 3
                  S+ID V+N K EEG +F LEDEIDHVADLFI +FHK+MR+QKL
Sbjct: 128 VDMR-GGSIIDMVKNGK-EEGEEFRLEDEIDHVADLFITRFHKQMRMQKL 175


>ref|XP_002304626.1| predicted protein [Populus trichocarpa] gi|222842058|gb|EEE79605.1|
           predicted protein [Populus trichocarpa]
          Length = 192

 Score =  104 bits (260), Expect = 1e-20
 Identities = 68/173 (39%), Positives = 91/173 (52%), Gaps = 9/173 (5%)
 Frame = -2

Query: 494 MKPIISVLSSIAKGKWGTIKSKTESLKAKLIIFSLLKPKHLPALGAISHKIHALVGGGTS 315
           +K I+S+LSS+ K K   IKSKT +LK + I+ SL++ K +  +G+IS+KIH ++     
Sbjct: 9   LKKIMSLLSSVTKAKSLAIKSKTSALKTRAIMLSLMRSKRV-LVGSISNKIHRILNQPEK 67

Query: 314 SSQQEQPHHXXXXXXXXXXXXXVXXXXXXXXXXXXXXXXN---------KYPDLRHCLFX 162
            S+ +                                            KYPDL H LF 
Sbjct: 68  DSEDDDNEDQSRAIVLYCNAMANESLSSCSQMAGTGDDQANNHYYCYDDKYPDLTHSLFD 127

Query: 161 XXXXXXDPNASVIDQVRNSKQEEGHDFSLEDEIDHVADLFINKFHKRMRIQKL 3
                  P  S+ID V+NSK E+G DFSLEDEIDHVADLFI +FHK+MR+QKL
Sbjct: 128 EDDFED-PGGSIIDLVKNSK-EDGEDFSLEDEIDHVADLFIMRFHKQMRLQKL 178


>ref|XP_002512796.1| conserved hypothetical protein [Ricinus communis]
           gi|223547807|gb|EEF49299.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 211

 Score = 97.8 bits (242), Expect = 1e-18
 Identities = 67/189 (35%), Positives = 92/189 (48%), Gaps = 26/189 (13%)
 Frame = -2

Query: 494 MKPIISVLSSIAKGKWGTIKSKTESLKAKLIIFSLLKPKHLPALGAISHKIHALVGGGTS 315
           +K I  VL+S+AK K   +K+KT +L+ +L+IFSLL+ K +  +  IS K+HAL G    
Sbjct: 10  LKKITLVLASMAKAKTLALKNKTNALRTRLMIFSLLRDKKI-LMSTISQKLHALAGQQEH 68

Query: 314 SSQQEQ-------------------------PHHXXXXXXXXXXXXXVXXXXXXXXXXXX 210
             QQ++                         P                            
Sbjct: 69  DKQQQEEGEDSIEDQSKAIVLYNHSTMSVPNPSQTELLENADDGQGNGYFYGYGYGYEEV 128

Query: 209 XXXXNKYPDLRHCLFXXXXXXXD-PNASVIDQVRNSKQEEGHDFSLEDEIDHVADLFINK 33
                K+PDL H LF       + P  SVI+ V+NSK+E G +FSLEDEIDHVADLFI +
Sbjct: 129 DGDEEKFPDLTHSLFDSEDLDFEDPGGSVIELVKNSKKE-GEEFSLEDEIDHVADLFIKR 187

Query: 32  FHKRMRIQK 6
           FH++MR+QK
Sbjct: 188 FHRQMRMQK 196


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